Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq15 107 1e-18 >seq15 Length=2091020 Score = 107 bits (118), Expect = 1e-18 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||||||||| || | ||| ||||||||||| ||||| || || | | ||| | | || Sbjct 2075485 CAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATC 2075544 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 ||||| || ||||| ||||| |||| || |||||||| | |||| || || ||||| Sbjct 2075545 TTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTC 2075604 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 ||||| ||| ||| | | || ||||| | ||| ||||| | || || || Sbjct 2075605 TTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGACTCAACCTCTAAGGTGATGGT 2075664 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 || || ||||| ||||| || ||||| ||||| ||| Sbjct 2075665 CTTACCGGTCAATGTTTTGACGAAAATTTGCATTGTG 2075701 Score = 105 bits (116), Expect = 5e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||||||||| |||| ||| ||||||||||| ||||| || || | | ||| | | || Sbjct 2074801 CAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATC 2074860 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 ||||| || ||||| ||||| |||| || |||||||| | |||| || || ||||| Sbjct 2074861 TTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTC 2074920 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 ||||| ||| ||| | | || ||||| | || ||||| | || || || Sbjct 2074921 TTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGT 2074980 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| ||||| || ||||| ||||| Sbjct 2074981 CTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2075013 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||||||||| || | ||| ||||||||||| ||||| || || | | ||| | | || Sbjct 2075029 CAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATC 2075088 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 ||||| || ||||| ||||| |||| || |||||||| | |||| || || ||||| Sbjct 2075089 TTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTC 2075148 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 ||||| ||| ||| | | || ||||| | || ||||| | || || || Sbjct 2075149 TTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGT 2075208 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| ||||| || ||||| ||||| Sbjct 2075209 CTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2075241 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||||||||| || | ||| ||||||||||| ||||| || || | | ||| | | || Sbjct 2075257 CAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATC 2075316 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 ||||| || ||||| ||||| |||| || |||||||| | |||| || || ||||| Sbjct 2075317 TTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTC 2075376 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 ||||| ||| ||| | | || ||||| | || ||||| | || || || Sbjct 2075377 TTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGT 2075436 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| ||||| || ||||| ||||| Sbjct 2075437 CTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2075469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937418935597