Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq15 107 1e-18
>seq15
Length=2091020
Score = 107 bits (118), Expect = 1e-18
Identities = 154/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
||||||||| || | ||| ||||||||||| ||||| || || | | ||| | | ||
Sbjct 2075485 CAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATC 2075544
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
||||| || ||||| ||||| |||| || |||||||| | |||| || || |||||
Sbjct 2075545 TTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTC 2075604
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
||||| ||| ||| | | || ||||| | ||| ||||| | || || ||
Sbjct 2075605 TTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGACTCAACCTCTAAGGTGATGGT 2075664
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770
|| || ||||| ||||| || ||||| ||||| |||
Sbjct 2075665 CTTACCGGTCAATGTTTTGACGAAAATTTGCATTGTG 2075701
Score = 105 bits (116), Expect = 5e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
||||||||| |||| ||| ||||||||||| ||||| || || | | ||| | | ||
Sbjct 2074801 CAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATC 2074860
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
||||| || ||||| ||||| |||| || |||||||| | |||| || || |||||
Sbjct 2074861 TTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTC 2074920
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
||||| ||| ||| | | || ||||| | || ||||| | || || ||
Sbjct 2074921 TTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGT 2074980
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || ||||| ||||| || ||||| |||||
Sbjct 2074981 CTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2075013
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
||||||||| || | ||| ||||||||||| ||||| || || | | ||| | | ||
Sbjct 2075029 CAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATC 2075088
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
||||| || ||||| ||||| |||| || |||||||| | |||| || || |||||
Sbjct 2075089 TTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTC 2075148
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
||||| ||| ||| | | || ||||| | || ||||| | || || ||
Sbjct 2075149 TTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGT 2075208
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || ||||| ||||| || ||||| |||||
Sbjct 2075209 CTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2075241
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
||||||||| || | ||| ||||||||||| ||||| || || | | ||| | | ||
Sbjct 2075257 CAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATC 2075316
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
||||| || ||||| ||||| |||| || |||||||| | |||| || || |||||
Sbjct 2075317 TTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTC 2075376
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
||||| ||| ||| | | || ||||| | || ||||| | || || ||
Sbjct 2075377 TTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGT 2075436
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || ||||| ||||| || ||||| |||||
Sbjct 2075437 CTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2075469
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380937418935597
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |