Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq39 205 5e-48
>seq39
Length=2831396
Score = 205 bits (226), Expect = 5e-48
Identities = 357/512 (70%), Gaps = 8/512 (2%)
Strand=Plus/Plus
Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947
||||||| |||| || ||||||| |||||||||||||| | | |||||| ||||||||
Sbjct 2508746 ATTTGGAGAGAACAATGTCCAATCACCATTTTGCTCAACTCTTTTCATAAACAAATCTGG 2508805
Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007
||||||| || || || ||||| ||||| |||||||| || || || |||||| |
Sbjct 2508806 GATCCACAAAGCTGGGAACAAGTCTCTAGCTCTAATTTCTTCCTTACCATGGTTCTTTCT 2508865
Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067
| || | ||| ||||| ||||| | |||||||||||| | ||| | ||||||| |||
Sbjct 2508866 AATTTCAATGAAGTCAAAGATATCAGCGTGCCATGGTTCAAGATATAAAGCAAAAGCACC 2508925
Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127
| ||| || ||||||||||| || || | ||||| | |||||||| | |||
Sbjct 2508926 TGGTCTCTTGTTACCACCTTGATCCACATAACGAGCAGTGTTGTTGAAAACACGAACCAT 2508985
Query 26128 TGGAACTAAT-CCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAA 26186
||||| |||| ||| ||||| ||||| || | | || | || || || || | ||
Sbjct 2508986 TGGAA-TAATACCATTTGAAGTACCGTTGGTACCAGCGATGTAGGCACCAGTGGAACGAA 2509044
Query 26187 TATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACA-ATCTGAA 26245
| | ||| ||| | || || |||||||| | ||||||||| ||||| ||| |
Sbjct 2509045 TGTTGTGGATATGCAATCCAATACCACCAGCACTTTTTGAAATCAAGGCACATGTCTTTA 2509104
Query 26246 ACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGAT 26305
| || || |||| |||| || ||| |||||||| | | || |||||||| ||
Sbjct 2509105 A-AGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAACAAGATGAC 2509163
Query 26306 AATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCT 26365
| ||| | | | || || | ||| || || || | | |||||||| | |||| |
Sbjct 2509164 ATTTGTGGTTTTGGAGTACCGGCATTGAACAAACATGGAGAACCATGAGTAAAGTATCTT 2509223
Query 26366 TCACTCA--AAGCTGTATAAGTTTCAAGAACT 26395
| | || || || ||||| |||| ||||
Sbjct 2509224 TGAGACATCAAATTG--TAAGTCTCAATAACT 2509253
Score = 145 bits (160), Expect = 4e-30
Identities = 215/305 (70%), Gaps = 0/305 (0%)
Strand=Plus/Minus
Query 25925 ACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATT 25984
||| | | |||||| ||||| |||||||||| ||||||| ||||| |||| | |
Sbjct 922165 ACTCTTTGCATAAACAAATCAGGAATCCACAACCCATAAAACAAATCCCTCGTACGAAAC 922106
Query 25985 TCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGT 26044
||||| || || ||||||||| | | | ||| | ||||| | ||| | ||||| ||
Sbjct 922105 TCTTCGTTCCCATGATTCTTTCTCATGTTTAAAATCTCAAACACATCGGCATGCCAAGGC 922046
Query 26045 TCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCA 26104
|| || |||||||| ||| ||| |||||| ||||||||||| || || |||| |||
Sbjct 922045 TCCAAGTAGATAGCGAAAGCTCCTGGTCTTTTGCCTCCACCTTGGTCAACATATCGGGCA 921986
Query 26105 GTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGA 26164
|| | ||||| ||| ||||| ||||||| |||| || ||| || |||||
Sbjct 921985 GTGTTGTTGAATACTCGTAACATGGGAACTACTCCACCTGCTCTTCCATTGGTGCTGGCT 921926
Query 26165 ATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTT 26224
|| | || ||| | ||||||| |||| |||||| || || || |||| |||
Sbjct 921925 ATATGCGAGCCTTGGGCCCTAATATTGTGAATATGAATTCCAATACCGCCAGAAGCTTTA 921866
Query 26225 GAAAT 26229
|||||
Sbjct 921865 GAAAT 921861
Score = 100 bits (110), Expect = 1e-16
Identities = 121/165 (73%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 25015 AAATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTC 25074
||| || |||| ||| |||||||| | | ||||||||| |||| || ||||||||
Sbjct 2507897 AAACTCACCAGCCAACACTCTTCTAGAGTAAATATTTGAAGTGTATGGCTCGAAACATTC 2507956
Query 25075 ATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATT 25134
||| || || || ||||| || ||||| || || |||||| || | || | || ||
Sbjct 2507957 ATTGTTACCCAAAATTTGTGATGTAGAAGCAGTAGGCATTGGAGCCACCAACAAGGAGTT 2508016
Query 25135 TCTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATC 25179
||||| ||| | ||| ||| || || ||| |||| |||||||||
Sbjct 2508017 TCTCATACCGTGTTTGGCAAGCTTTTCTTTCAATTCATCCCAATC 2508061
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039879726925
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |