Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq39 114 2e-20
seq14 102 1e-16
>seq39
Length=2831396
Score = 114 bits (126), Expect = 2e-20
Identities = 350/531 (66%), Gaps = 29/531 (5%)
Strand=Plus/Plus
Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGA---AGACCCTGAAT 64770
|||||||| |||||| ||||||| ||||||||| | || |||| ||| |||||
Sbjct 2633752 TGGACTGCAGAAGAAATTGATTTAGGTAAAGATCTTCATGATTGGAGAGAGAAATTGAAT 2633811
Query 64771 GAAAATGAAAAGAAATTCATA--AAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAA 64828
|| ||||||| | ||||| ||| | || |||| || || |||| || ||||| |
Sbjct 2633812 GACAATGAAAGGTTTTTCATTGGAAGAA--TCTTGGCCTTTTTCGCTGCCTCTGATGGTA 2633869
Query 64829 TTGTTTTTGAGAATATCAATAACAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCT 64888
||||| ||| || | | || ||| | | |||||| || || ||||| |
Sbjct 2633870 TTGTTAATGAAAACTTGGTGGAAAACTTTTCTGCTGAAGTTCAAATTCCTGAAGCCAAAT 2633929
Query 64889 CATTCTACGCATATCAATGCCATAATG-AAATGGTTCATGGCGAAACATATTCAAAATTG 64947
|||| || | | ||| | || ||| ||| ||||| ||||| |||||| ||||
Sbjct 2633930 CATTTTATGGTTTCCAAATC-ATGATGGAAAACATTCATTCAGAAACTTATTCATTATTG 2633988
Query 64948 ATTGACAAATACATTAAGGATGGATCTGAAAAGAAGCAG-----TTATTTGAAGCCATCC 65002
||||| | || || |||||| | || ||||| | ||||| | || ||
Sbjct 2633989 ATTGAAACTTATATCAAGGATCCA-----AAGGAAGCCGATTTCTTATTCAATGCTATTG 2634043
Query 65003 AAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGT 65062
|||| | || ||| | |||||||| | ||||| || | |||| || | | | |
Sbjct 2634044 AAACCATCCCTCAAATTAAAAAGAAGGCTGATTGGGCCATCAGATGGATTCA---AGATT 2634100
Query 65063 CTCGCTCC----TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTC 65118
| || | | || || ||| | | |||| ||||| ||| ||||||||||| |||
Sbjct 2634101 C-CGATGCATTGTTTGCTGAGAGATTGGTTGCTTTTGCTGCTGTTGAGGGTATCTTTTTC 2634159
Query 65119 TCCGGGTCATTCTGC-GCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATG 65177
|| || || ||| | |||| |||||||||||| | || | |||||||| |
Sbjct 2634160 AGTGGATCGTT-TGCTTCCATTTTCTGGTTGAAGAAGAGAGGATTAATGCCAGGATTGAC 2634218
Query 65178 CTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228
||| || |||||| | |||| || ||||| ||| | ||| || |||||
Sbjct 2634219 CTTTTCCAATGAATTGATTTGTCGTGATGAAGGTTTACACACTGATTTTGC 2634269
Score = 100 bits (110), Expect = 3e-16
Identities = 219/323 (68%), Gaps = 9/323 (3%)
Strand=Plus/Minus
Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335
||||||||||||||||| || || |||| | || ||| || || || ||||| |
Sbjct 2814535 GGTGCCAAGATCCCCCGTGGTGCTATTCTTTCAGGGCCGCCGGGAACAGGTAAGACATTG 2814476
Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC-ATCCAGTGCTCTGCCGCAAA 175394
|||||| ||||| || || ||| | || || || || | || | | | ||
Sbjct 2814475 CTCGCCAAAGCCACAGCTGGGGAAGCTGGCGTTCCGTTTTATTCTGTATCCGGTTCCGAA 2814416
Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGC 175454
|| || || ||||||||||||||||||||| | | || || ||| | || | | ||
Sbjct 2814415 -TTCGTTGAAATGTTTGTTGGTGTGGGTGCCTCACGTGTGCGTGATTTATTCAAGACTGC 2814357
Query 175455 CCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACG 175514
| |||||| ||||| |||||| || |||| || || ||||| | || |||||| |
Sbjct 2814356 AAGGGAAAATGCACCATCTATTGTGTTTGTTGACGAAATCGATGCCATTGGTAAGCAAAG 2814297
Query 175515 CAGCGCTGGTGGTATGC-----CAGCAAATGACGAGAGAGAACAAACAATTAATCAACTA 175569
| | | | | |||| ||| |||||||| |||||| ||| | |||||||||
Sbjct 2814296 -ATC-CAAGGGAAATGCAACAGGAGCTAATGACGAAAGAGAAACTACATTGAATCAACTA 2814239
Query 175570 CTCACCGAGATGGATGGCTTTGA 175592
| || |||||||| |||||
Sbjct 2814238 TTGGTTGAAATGGATGGGTTTGA 2814216
>seq14
Length=365783
Score = 102 bits (112), Expect = 1e-16
Identities = 186/271 (69%), Gaps = 6/271 (2%)
Strand=Plus/Plus
Query 27781 CCAGTAGATCCAAATCCACCCGCACCTCTCTCTGT-CTCTTCAAGAACACC-----AATT 27834
|| || |||||||||||||| |||||| ||| || ||| |||| || ||||
Sbjct 51291 CCTGTGGATCCAAATCCACCTTCACCTCGCTCAGTGCTCGTCAATGCTTCCTCAGTAATT 51350
Query 27835 TCCTGCACATCGGGTGTTTCACAGCGCTCAAGGACAAGTTGTGCGATGCGATCCCCTTTC 27894
|| | | ||| | | || | || | || | ||| || || | ||| || ||
Sbjct 51351 TCTTCAATATCAGCATTAACAATTCTTTCTAAAACCAATTGAGCAATTCTATCGCCCTTT 51410
Query 27895 TTTACCTCAAAGTCTTTGTCTCCGTGATTGAAGAGAACGACTTTGACTTCACCTGTATAG 27954
|| || ||||||| || || || ||||| | || ||||| ||||||||| |||
Sbjct 51411 TTAACATCAAAGTTCTTTTCAGAATGGTTGAACAAGACAACTTTAACTTCACCTCGATAA 51470
Query 27955 TCGGGATCAATAACACCCGCACCAACTTGAATACCATGCTTCACAGCGAGACCGGATCGT 28014
|| | ||||| ||||| |||||| | ||||||||| || ||||| || || || ||
Sbjct 51471 TCAGCGTCAATGACACCTGCACCAGTTGAAATACCATGTTTGACAGCAAGCCCCGAACGA 51530
Query 28015 GGTGCAACACGACCATACACACCATTTGGCA 28045
||||| ||||||||||| |||| | ||||
Sbjct 51531 GGTGCCACACGACCATATGTACCAATAGGCA 51561
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569309172320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |