Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq39 266 5e-66
seq15 132 7e-26
seq6 118 2e-21
>seq39
Length=2831396
Score = 266 bits (294), Expect = 5e-66
Identities = 595/883 (67%), Gaps = 20/883 (2%)
Strand=Plus/Minus
Query 17860 AGCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATAT 17919
||| |||| ||| || ||| |||| || |||||||| ||||| || |||| || ||
Sbjct 2634567 AGCCTTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGAT 2634508
Query 17920 TAAATTCATAAAATCAAATGGATTAGTGGTTTTATAATATTTTTCTTGTATTAATTCGTA 17979
| |||||||||||||||||| ||| || ||| ||||| | || |
Sbjct 2634507 ATTCTCCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTTTGTTACCCAAAGCAAC 2634448
Query 17980 TAATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCTAG 18039
|||||||| || || |||||||| |||||||| ||||||| | |||||||| || |
Sbjct 2634447 CAATAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAA 2634388
Query 18040 TAGTCTGAAAGGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTCTTTTAT 18099
| || | || | |||||| ||| |||||||| || || ||||| | || | ||
Sbjct 2634387 CAAACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAAT 2634328
Query 18100 TATGTTTATTACCCTAGATTTTGGCAATTTATTAATTATGT-GATTATAATATAATAAAC 18158
| || || | | ||| || | | | || ||| || | | | || || |
Sbjct 2634327 AA--TTCTTTCAACAATCTTTGGGTCAGGTCT--ATGTTGTAAATGAGCAAACAACAAGC 2634272
Query 18159 ACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAACC 18218
| |||||||||||||||||||||||||| | | || ||||| || ||| || || |
Sbjct 2634271 ATGCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATC 2634212
Query 18219 CGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTA-CTAGAAAAGAAT 18277
| ||||||| ||||| || || | ||| || || || || |||| | | | || ||
Sbjct 2634211 CTGGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGC-AAACGATCCACTGAAAAAG 2634153
Query 18278 ATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCAAA-ACTGTATTTATTGCTCA 18335
||||||||||| ||| || || || | ||||| |||||||| | || || ||
Sbjct 2634152 ATACCCTCAACAGCA-GCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCT-T 2634095
Query 18336 GTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCAT 18395
| |||||| | ||||| || | | || || || | || |||||||
Sbjct 2634094 GAATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCAT 2634035
Query 18396 TAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACA 18455
| || || ||| ||| || | ||| || |||||||| || || || || |||||
Sbjct 2634034 TGAATAAGAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAG 2633975
Query 18456 TTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGAT 18515
|||| ||||| ||| ||||||| || || |||| |||||| ||| | || || |||
Sbjct 2633974 TTTCTGAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAA 2633915
Query 18516 ATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATG 18575
||||| || | |||| |||| ||||| || |||||||| ||||| |||| | |
Sbjct 2633914 TTTGAACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAG 2633855
Query 18576 CGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGAGATTGT---TCC 18632
||||||| ||||| | | ||||||| ||||||| || || | || | |||
Sbjct 2633854 CGAAAAAGGCCAAGATTCTTCCAATGAAAAACCTTTCATTGTCATTCAATTTCTCTCTCC 2633795
Query 18633 ATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGCCT 18692
| |||| | |||||| || ||||| |||||| | ||||| || |||| ||| ||||
Sbjct 2633794 AATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCT 2633735
Query 18693 GTTTGTACATTTTATAAATATCTTCATGTTGT---ATAGGAAA 18732
|||||||||| |||| |||||| | | ||||||||
Sbjct 2633734 TCTTGTACATTTGCCAAAT---TTCATGGTATCTAATAGGAAA 2633695
>seq15
Length=2091020
Score = 132 bits (146), Expect = 7e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | ||||||||||| || || || || || ||||| || ||| ||
Sbjct 2075013 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2074954
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | |||| || || ||| || || ||||| |||||||| || || ||||| |||
Sbjct 2074953 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2074894
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||||| ||| ||||| || | |||||| |||||||| || || || ||
Sbjct 2074893 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2074834
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| ||||| | || | || || ||||| ||||| ||||| |||
Sbjct 2074833 ATTCAAAAAGAATCCACATTACACTTGGTGTTGAGATTGAGAGGTGGT 2074786
Score = 132 bits (146), Expect = 7e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | ||||||||||| || || || || || ||||| || ||| ||
Sbjct 2075241 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075182
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | |||| || || ||| || || ||||| |||||||| || || ||||| |||
Sbjct 2075181 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075122
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||||| ||| ||||| || | |||||| |||||||| || || || ||
Sbjct 2075121 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075062
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| ||||| | || | || || ||||| ||||| ||||| |||
Sbjct 2075061 ATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGGT 2075014
Score = 132 bits (146), Expect = 7e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | ||||||||||| || || || || || ||||| || ||| ||
Sbjct 2075469 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075410
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | |||| || || ||| || || ||||| |||||||| || || ||||| |||
Sbjct 2075409 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075350
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||||| ||| ||||| || | |||||| |||||||| || || || ||
Sbjct 2075349 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075290
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| ||||| | || | || || ||||| ||||| ||||| |||
Sbjct 2075289 ATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGGT 2075242
Score = 129 bits (142), Expect = 9e-25
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||| || | ||||||||||| || || || || || ||||| || || ||
Sbjct 2075698 AATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAGTCATC 2075639
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|| | |||| || || ||| || || ||||| |||||||| || || ||||| ||
Sbjct 2075638 AGACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCA 2075579
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|||||||||||||| ||| ||||| || | |||||| |||||||| || || || ||
Sbjct 2075578 ACAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 2075519
Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| ||||| | || | || || ||||| ||||| ||||| |||
Sbjct 2075518 CATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGGT 2075470
>seq6
Length=960076
Score = 118 bits (130), Expect = 2e-21
Identities = 171/238 (72%), Gaps = 5/238 (2%)
Strand=Plus/Plus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||| ||| | ||||| | || || ||||| || || |||||||| || ||
Sbjct 21802 AATGCAAATCTTTGTCAAAACCCTTACGGGTAAAACCATCACTTTAGAAGTTGAGTCATC 21861
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||| | ||| || || || || || ||||| || ||||| || || ||||| ||
Sbjct 21862 TGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCAGATCA 21921
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|||||||||||| | ||| ||||| || | |||||| |||||||| || || || |
Sbjct 21922 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACA- 21980
Query 156002 TATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT-GTAAAA 156056
| ||||||| || | || | || || ||||| ||||| ||||| ||| ||||||
Sbjct 21981 -ACATCCAAAAGGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTGGTGGTAAAA 22037
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731871643212400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |