Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq39 172 2e-37
seq6 89.7 2e-12
>seq39
Length=2831396
Score = 172 bits (190), Expect = 2e-37
Identities = 621/955 (65%), Gaps = 21/955 (2%)
Strand=Plus/Plus
Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTG--TATTCTACAATCTC 155644
|||| || |||| ||||| || ||| || | | | || || | ||||| ||||| ||
Sbjct 2508460 CAATCGAAGCCAAGTTACAAACAGCAA-CTTCATCTGGT-GCCGAATATTCAACAATTTC 2508517
Query 155645 ACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACA 155704
||| |||| ||| ||| || || || ||||| || ||||| || || |||||||
Sbjct 2508518 ACAACACAAGTTGGAAGATTTAATAACACCCAAATTTTTTTGGTTGGACTTGGTGTTACA 2508577
Query 155705 AGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAG 155764
|||||||||||| | ||| ||||||| || ||||| | ||||| |||| ||
Sbjct 2508578 AGCATCCTTGTACAACATGAATGGGGTACCAGTCTCAGTTTGTGCCTCCAAGATGGAATA 2508637
Query 155765 CCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATA 155824
||| | | | || || ||| ||| | | ||||| ||| |||||| |||
Sbjct 2508638 CCACAATTTTTGAGCTTTGATTGTCTTTCTACCACGACCTTCTTTCTCGTATTTCTCATA 2508697
Query 155825 CAGCGTTCGGTAA--TCCTCACCGTAACAATCACTCA-GTCCAGGGCACTTATCGGGGCA 155881
|| | || || || ||||| ||| |||| || || | || | || || |
Sbjct 2508698 CAAC--TCAACAAATTCGTCACCATAAGTATCAGCCAAGTTTGGAGCT-TCATTTGGAGA 2508754
Query 155882 AAACAGCGACCAA--ATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAA 155939
|||| | |||| | | || | | || | | |||||| | ||| |||
Sbjct 2508755 GAACAATGTCCAATCACCATTTTGCTCA--ACTCTTTTCATAAACAAATCTGGGATCCAC 2508812
Query 155940 ATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCT 155999
| ||| ||| | ||| || || | || || | || || ||||| | | ||
Sbjct 2508813 AAAGCTGGGAACAAGTCTCTAGCTCTAATTTCTTCCTTACCATGGTTCTTTCTAATTTCA 2508872
Query 156000 AAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTC 156059
| ||| || ||||||| || ||| || ||||| | ||||||| ||| |||
Sbjct 2508873 ATGAAGTCAAAGATATCAGCGTGCCATGGTTCAAGATATAAAGCAAAAGCACCTGGTCTC 2508932
Query 156060 TTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATA 156116
||| ||||| ||||| ||||| |||||||| || ||||| |||| | ||| ||||||
Sbjct 2508933 TTGTTACCACCTTGATCCACATAACGAGCAGTGTTGTTGAAAACACGAACCATTGGAATA 2508992
Query 156117 ATACCATTGGAAGTGCCATTGGTTCC-GCGAATATGCGAACCAGATGAGCGAACATTATG 156175
|||||||| ||||| || ||||| || ||| || | | ||||| || |||| || ||
Sbjct 2508993 ATACCATTTGAAGTACCGTTGGTACCAGCG-ATGTAGGCACCAGTGGAACGAATGTTGTG 2509051
Query 156176 AATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATT 156235
||||| | |||||||||||| | | ||| ||||| || ||| ||||| ||| |
Sbjct 2509052 GATATGCAATCCAATACCACCAGCACTTTTTGAAATCAAGGCACATGTCTTTAAAGTGTC 2509111
Query 156236 GAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGG 156295
||||||||||||||||||| |||| ||||| | | | || || | ||| ||
Sbjct 2509112 ATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAACAAGATGACATTTGTGG 2509171
Query 156296 TCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355
| ||| || || || ||||| | || | ||||| |||| || | | ||||||
Sbjct 2509172 TTTTGGAGTACCGGCATTGAACAAACATGGAGAACCATGAGTAAAGTATCTTTGAGACAT 2509231
Query 156356 ATAATCGTATGTCTCCTTAA-TCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCC 156414
||| ||| ||||| ||| |||| | || || || |||| |||| || |
Sbjct 2509232 CAAATTGTAAGTCTCAATAACTCTT-GGGATATCTCTTCCATGGATACCAATAGCAACTC 2509290
Query 156415 TCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGC 156474
|||| || || || || | || ||| ||||| ||| || | | |||| |
Sbjct 2509291 TCATAATCAAGTGTTGTGGTCTTTCAGCAACTTTTCCATTAATACGTAACAAATATGATC 2509350
Query 156475 GTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGTTGTAATCAAT 156529
|||| |||||| || || || |||| | |||||||||| ||| ||||
Sbjct 2509351 TCTCCAAAGTTTTGAATCCAAAGTAATTGTAGTTGAAATCACGGTCATAAACAAT 2509405
Score = 127 bits (140), Expect = 6e-24
Identities = 257/378 (68%), Gaps = 5/378 (1%)
Strand=Plus/Plus
Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909
||||| || ||||||| | ||||||| |||||| || |||||||| ||||| |
Sbjct 2814129 CTATCGAATCTACCAGGTCTCAATAATGCTCTGTCTAAAATGTCGGCTCTATTTGTACCA 2814188
Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATTA 288969
||||||||||| | || || | ||| |||||||| || | ||||||
Sbjct 2814189 GCCAATACAACGACGTGGTCAGTACTATCAAACCCATCCATTTCAACCAATAGTTGATTC 2814248
Query 288970 AGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttttttA 289029
| ||| ||| ||||| ||||| | ||| ||| || ||| | | |||| |||
Sbjct 2814249 AATGTAGTTTCTCTTTCGTCATTAGCTCCTGTTGCATTTCCC---TTGGATCTTTGCTTA 2814305
Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089
|||| ||||| |||||||||| || | | | | || | ||||| || ||| |
Sbjct 2814306 CCAATGGCATCGATTTCGTCAACAAACACAATAGATGGTGCATTTTCCCTTGCAGTCTTG 2814365
Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149
||||| || | ||||| || || || | ||||||| ||||||| || ||||| ||| ||
Sbjct 2814366 AATAAATCACGCACACGTGAGGCACCCACACCAACAAACATTTCAACGAATTCGGAACCG 2814425
Query 289150 GATACTTGAAT-GAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208
||||| |||| || | || ||||| || ||| || | || || | ||||||
Sbjct 2814426 GATAC-AGAATAAAACGGAACGCCAGCTTCCCCAGCTGTGGCTTTGGCGAGCAATGTCTT 2814484
Query 289209 ACCTGTTCCAGGTGGTCC 289226
||||||||| || || ||
Sbjct 2814485 ACCTGTTCCCGGCGGCCC 2814502
>seq6
Length=960076
Score = 89.7 bits (98), Expect = 2e-12
Identities = 144/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 289021 CtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTC 289080
|||| |||||||| ||||||||| || |||| ||||| | || | | | ||
Sbjct 731045 CTTTCTTTACCAATAGCATCAATCTCATCAACAAAAATGATTGCTGGGGCCATATCCCTT 731104
Query 289081 GCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAAT 289140
|| || ||||| || | |||||| ||||| |||| ||||||| |||| || ||||||
Sbjct 731105 GCCGTTTTGAATAAATCACGTACACGCGATGCACCAACACCAACAAACATCTCAACAAAT 731164
Query 289141 TCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGA 289200
|| || |||| || | || | |||| |||||| || || ||| | ||||
Sbjct 731165 TCCGATCCGGAAACACTGAGAAAAGGTACACCTGCTTCACCAGCAGTTGCTTTTGCCAAC 731224
Query 289201 AGTGTCTTACCTGTTCCAGGTGGTCCC 289227
| ||||||||||| ||||| || |||
Sbjct 731225 AAGGTCTTACCTGTACCAGGAGGCCCC 731251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816864551143
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |