Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq39 95.1 2e-14 seq14 89.7 7e-13 >seq39 Length=2831396 Score = 95.1 bits (104), Expect = 2e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 168528 GAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTT 168587 ||||| || ||| |||| || || || ||| | ||| || | ||| | ||| ||| Sbjct 1392650 GAACTCTTGTGGTTTATTGCTGGATCCACGGATGCCAAAATCTTGAGTGAAAAAGGAGTT 1392591 Query 168588 AAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTACCGAAAGA 168647 ||| | ||| | | |||||| || ||||||||||| ||| || ||| | | Sbjct 1392590 AAAATATGGGAGGGCAATGGTCTGCGAGAATTTTTAGACAATCTTGGATTGACCCATCGT 1392531 Query 168648 AAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATAT 168707 ||||||||||| || ||| ||||||| ||||||||||| ||| || ||| ||||| Sbjct 1392530 CGTGAAGGTGATTTGGGACCAGTTTATGGGTTTCAATGGAGGCATTTTGGTGCTGAATAT 1392471 Query 168708 ATTGACTGTGATACAGATTACACCGGACAAGG 168739 | || || ||||| || || || || ||||| Sbjct 1392470 AAAGATTGCGATACTGACTATACTGGCCAAGG 1392439 Score = 86.0 bits (94), Expect = 8e-12 Identities = 102/136 (75%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 193913 AGGTGGAGGTTTAAGATTTGGAGAAATGGAGAAAGACTGTATTTTAGTTCATGGTGCTAC 193972 || ||| ||||||||||| ||||||||||||| ||| ||| || | | | |||||||| | Sbjct 928507 AGATGGTGGTTTAAGATTGGGAGAAATGGAGAGAGATTGTGTTATCGCTTATGGTGCTTC 928566 Query 193973 TCA-ATTCTTGAATGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCGATGTTTGCA 194031 || ||||| | |||||| || | | | ||| ||| ||||| | || |||||||| | Sbjct 928567 CCAGCTTCTTCTA-GAAAGATTGATGATATCTTCAGATGCTTTTGAGGTTGATGTTTGTA 928625 Query 194032 CAGAATGTGGTATGAT 194047 ||||||| |||| Sbjct 928626 ACAAATGTGGGTTGAT 928641 >seq14 Length=365783 Score = 89.7 bits (98), Expect = 7e-13 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 51990 TATAATGCTGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCAATCATATGGAGCT 52049 |||||||| ||||||||||||||||||||||||||||||||||||||| || | | |||| Sbjct 309863 TATAATGCCGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCAAACAGAAGAAGCT 309922 Query 52050 ACTGCTGAA 52058 | || ||| Sbjct 309923 AGAGCCGAA 309931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635177290350920