Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_023611.1
Length=198533
Score E
Sequences producing significant alignments: (Bits) Value
seq39 95.1 2e-14
seq14 89.7 7e-13
>seq39
Length=2831396
Score = 95.1 bits (104), Expect = 2e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 168528 GAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTT 168587
||||| || ||| |||| || || || ||| | ||| || | ||| | ||| |||
Sbjct 1392650 GAACTCTTGTGGTTTATTGCTGGATCCACGGATGCCAAAATCTTGAGTGAAAAAGGAGTT 1392591
Query 168588 AAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTACCGAAAGA 168647
||| | ||| | | |||||| || ||||||||||| ||| || ||| | |
Sbjct 1392590 AAAATATGGGAGGGCAATGGTCTGCGAGAATTTTTAGACAATCTTGGATTGACCCATCGT 1392531
Query 168648 AAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATAT 168707
||||||||||| || ||| ||||||| ||||||||||| ||| || ||| |||||
Sbjct 1392530 CGTGAAGGTGATTTGGGACCAGTTTATGGGTTTCAATGGAGGCATTTTGGTGCTGAATAT 1392471
Query 168708 ATTGACTGTGATACAGATTACACCGGACAAGG 168739
| || || ||||| || || || || |||||
Sbjct 1392470 AAAGATTGCGATACTGACTATACTGGCCAAGG 1392439
Score = 86.0 bits (94), Expect = 8e-12
Identities = 102/136 (75%), Gaps = 2/136 (1%)
Strand=Plus/Plus
Query 193913 AGGTGGAGGTTTAAGATTTGGAGAAATGGAGAAAGACTGTATTTTAGTTCATGGTGCTAC 193972
|| ||| ||||||||||| ||||||||||||| ||| ||| || | | | |||||||| |
Sbjct 928507 AGATGGTGGTTTAAGATTGGGAGAAATGGAGAGAGATTGTGTTATCGCTTATGGTGCTTC 928566
Query 193973 TCA-ATTCTTGAATGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCGATGTTTGCA 194031
|| ||||| | |||||| || | | | ||| ||| ||||| | || |||||||| |
Sbjct 928567 CCAGCTTCTTCTA-GAAAGATTGATGATATCTTCAGATGCTTTTGAGGTTGATGTTTGTA 928625
Query 194032 CAGAATGTGGTATGAT 194047
||||||| ||||
Sbjct 928626 ACAAATGTGGGTTGAT 928641
>seq14
Length=365783
Score = 89.7 bits (98), Expect = 7e-13
Identities = 61/69 (88%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 51990 TATAATGCTGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCAATCATATGGAGCT 52049
|||||||| ||||||||||||||||||||||||||||||||||||||| || | | ||||
Sbjct 309863 TATAATGCCGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCAAACAGAAGAAGCT 309922
Query 52050 ACTGCTGAA 52058
| || |||
Sbjct 309923 AGAGCCGAA 309931
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635177290350920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |