Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq14 89.7 6e-13 seq39 87.8 2e-12 >seq14 Length=365783 Score = 89.7 bits (98), Expect = 6e-13 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 50440 TATAATGCTGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCAATCATATGGAGCT 50499 |||||||| ||||||||||||||||||||||||||||||||||||||| || | | |||| Sbjct 309863 TATAATGCCGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCAAACAGAAGAAGCT 309922 Query 50500 ACTGCTGAA 50508 | || ||| Sbjct 309923 AGAGCCGAA 309931 >seq39 Length=2831396 Score = 87.8 bits (96), Expect = 2e-12 Identities = 172/248 (69%), Gaps = 6/248 (2%) Strand=Plus/Plus Query 193356 GGGCCAACTTATTACCATCGTCTTAAACACATGGTTAAGGATAAAATGCATGCTAGAAGT 193415 || || | ||||||||| | || |||||||| ||| || |||||||| ||| | Sbjct 928397 GGTCCCATTTATTACCAAAAATTGAAGCACATGGTGTTGGACAAGATGCATGCCAGA-GC 928455 Query 193416 CATGGGC--AAGTGACTACTTTACATCGACAACCAAATTGTGGTCGTTCTCAAGGTGGAG 193473 | |||| ||| | | || ||| |||| |||| | ||| | || || ||| | Sbjct 928456 AAGGGGCCCAAGGGCCGTGTTGACAA-GACAGCCAACTGAAGGTAGATCCAGAGATGGTG 928514 Query 193474 GTTTAAGATTTGGAGAAATGGAAAAAGACTGTATTTTAGTCCATGGTGCTACTCA-ATTC 193532 |||||||||| ||||||||||| | ||| ||| || | | |||||||| | || ||| Sbjct 928515 GTTTAAGATTGGGAGAAATGGAGAGAGATTGTGTTATCGCTTATGGTGCTTCCCAGCTTC 928574 Query 193533 TTAAATGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCGATGTTTGCACAGAATGT 193592 || | |||||| || | | | ||| ||| ||||| | || |||||||| | ||||| Sbjct 928575 TTCTA-GAAAGATTGATGATATCTTCAGATGCTTTTGAGGTTGATGTTTGTAACAAATGT 928633 Query 193593 GGTATGAT 193600 || |||| Sbjct 928634 GGGTTGAT 928641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628530893591040