Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq39 194 4e-44 seq14 93.3 1e-13 seq3 93.3 1e-13 >seq39 Length=2831396 Score = 194 bits (214), Expect = 4e-44 Identities = 563/861 (65%), Gaps = 7/861 (1%) Strand=Plus/Minus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 || ||||| ||||||||| | || | | ||||| | ||| | ||||| | | | Sbjct 2509375 TACTTTGGATTCAAAACTTTGGAGAGATCATATTTGTTACGTATTAATGGAAAAGTTGCT 2509316 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 ||| | || |||||| || || | | ||||| |||||||| |||||| ||||| | Sbjct 2509315 GAAAGACCACAACACTTGATTATGAGAGTTGCTATTGGTATCCATGGAAGAGATATCCCA 2509256 Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483 |||||||| ||| || | | | ||| | || ||||| | |||| Sbjct 2509255 AGAGTTATTGAGACTTACAATTTGATGTCTCAAAGATACTTTACTCATGGTTCTCCATGT 2509196 Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAATTAA 110542 | || || || || ||| | |||| || | ||||| |||||| | | ||| || Sbjct 2509195 TTGTTCAATGCCGGTACTCCAAAACCACAAATGTCATCTTG-TTTCTTGGTTGCAATGAA 2509137 Query 110543 CGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC-TGCTCTTATTTCTAAAA 110601 || ||||||||||||||||||||||| || ||||||| | ||| | ||||| |||| Sbjct 2509136 AGAAGATTCTATTGAAGGTATTTATGACACT-TTAAAGACATGTGCCTTGATTTCAAAAA 2509078 Query 110602 ACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAA 110661 |||| || ||||| | || | || | ||||| || | || || | ||||| Sbjct 2509077 GTGCTGGTGGTATTGGATTGCATATCCACAACATTCGTTCCACTGGTGCCTACATCGCTG 2509018 Query 110662 CAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAA 110721 | || ||| |||||| ||| || |||||||| | | || |||||| ||||||| Sbjct 2509017 GTACCAACGGTACTTCAAATGGTATTATTCCAATGGTTCGTGTTTTCAACAACACTGCTC 2508958 Query 110722 AATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTT 110778 |||||| ||||||||||| |||||| || | |||||| | ||||| ||||| | Sbjct 2508957 GTTATGTGGATCAAGGTGGTAACAAGAGACCAGGTGCTTTTGCTTTATATCTTGAACCAT 2508898 Query 110779 GGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA 110838 |||| | ||||| ||||| ||| | ||| || | || || || || |||||| | Sbjct 2508897 GGCACGCTGATATCTTTGACTTCATTGAAATTAGAAAGAACCATGGTAAGGAAGAAATTA 2508838 Query 110839 GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAG 110898 |||| | || || || || ||||||| ||||||| || |||||| | ||| | Sbjct 2508837 GAGCTAGAGACTTGTTCCCAGCTTTGTGGATCCCAGATTTGTTTATGAAAAGAGTTGAGC 2508778 Query 110899 AAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATG 110958 ||||||| ||| | | | | ||| || |||| | ||||| |||| Sbjct 2508777 AAAATGGTGATTGGACATTGTTCTCTCCAAATGAAGCTCCAAACTTGGCTGATACTTATG 2508718 Query 110959 GAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACAAA 111018 | | || |||| || | || || ||||| || |||||||| | | || || Sbjct 2508717 GTGACGAATTTGTTGAGTTGTATGAGAAATACGAGAAAGAAGGTCGTGGTAGAAAGACAA 2508658 Query 111019 TTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTT 111078 | ||||||| || | |||| ||| | || ||||| ||| ||||| || || | Sbjct 2508657 TCAAAGCTCAAAAATTGTGGTATTCCATCTTGGAGGCACAAACTGAGACTGGTACCCCAT 2508598 Query 111079 ATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTA 111138 || ||||| || ||| | ||| ||| || || |||| ||||| || |||| Sbjct 2508597 TCATGTTGTACAAGGATGCTTGTAACACCAAGTCCAACCAAAAAAATTTGGGTGTTATTA 2508538 Query 111139 AGTCTAGTAATTTGTGCTGTG 111159 | ||| || ||||| |||| Sbjct 2508537 AATCTTCCAACTTGTGTTGTG 2508517 Score = 152 bits (168), Expect = 1e-31 Identities = 495/753 (66%), Gaps = 23/753 (3%) Strand=Plus/Plus Query 131435 TTTCCAATTAAACATCACGATGTTTTCGATATGTATAAGAAATCTGTTGCGGCCTTCTGG 131494 ||||| |||| | | || || ||| | ||||| ||||| ||| || | |||||| Sbjct 2633695 TTTCCTATTAGATACCATGAAATTTGGCAAATGTACAAGAAGGCTGAAGCATCATTCTGG 2633754 Query 131495 ACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGG---GAAAAATTAACCTTG 131551 |||| ||||| || ||| | |||||| || |||||||| || ||||| | Sbjct 2633755 ACTGCAGAAGAAATTGATTTAGGTAAAGATCTTCATGATTGGAGAGAGAAATTGAATGAC 2633814 Query 131552 AATGAAAAAGATTTTGTTTCCAAAGTTCTTG-CATTCTTCGCCGGAAGTGATGGCATTGT 131610 ||||||| | |||| || || ||||| | || ||||| | |||||| ||||| Sbjct 2633815 AATGAAAG-GTTTTTCATTGGAAGAATCTTGGCCTTTTTCGCTGCCTCTGATGGTATTGT 2633873 Query 131611 TATTGAAAATCTTGTTATTAA--TTTCATTCAAGAAATTGATATTCCTGAAGTAACATCG 131668 || |||||| |||| | || ||| | | ||| || | |||||||||| | ||| Sbjct 2633874 TAATGAAAA-CTTGGTGGAAAACTTTTCTGCT-GAAGTTCAAATTCCTGAAGCCAAATCA 2633931 Query 131669 TTCTACACATTTCAAGCCGCTGTTGAATCTATTCATAGCGAGATGTATTCATTATTGATT 131728 || || || ||| | | ||| |||||| || | ||||||||||||||| Sbjct 2633932 TTTTATGGTTTCCAAATCATGATGGAAAACATTCATTCAGAAACTTATTCATTATTGATT 2633991 Query 131729 GAGAGTCTTGTTAAAAATGAAGATGATAAAAATAAATTATTTGATGCTGTAAATAAATTT 131788 || | | | | || || | | || || ||||| ||||| | | | | Sbjct 2633992 GAAACTTATATCAAGGATCCAAAGGAAGCCGATTTCTTATTCAATGCTATTGAAACCATC 2634051 Query 131789 CCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCT-AA 131847 ||| |||||||||||| || || ||||| || | |||||||||| ||||||| | | Sbjct 2634052 CCTCAAATTAAAAAGAAGGCTGATTGGGCCATCAGATGGATTCAA---GATTCCGATGCA 2634108 Query 131848 T--TTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCT 131905 | ||| || ||| | || ||||||||| |||||| ||||| | |||||| ||| Sbjct 2634109 TTGTTTGCTGAGAGATTGGTTGCTTTTGCTGCTGTTGAGGGTATCT--TTTTCA-GTGGA 2634165 Query 131906 TTCTGTGCT---ATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCC 131962 | | |||| || || ||| | |||||| | ||||| ||||| ||| | | || ||| Sbjct 2634166 TCGTTTGCTTCCATTTTCTGGTTGAAGAAGAGAGGATTAATGCCAGGATTGACCTTTTCC 2634225 Query 131963 AATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGCTATATTAATCTATAGA 132022 ||| |||| || | | ||||||| || || ||||| ||||| || | | | | Sbjct 2634226 AATGAATTGATTTGTCGTGATGAAGGTTTACACACTGATTTTGC-ATGCTTGTTGTTTGC 2634284 Query 132023 AAATTTGC-TGATAAACTTGATGAAAATAATATTAAACAACTTATAAGCGAAGCAGTTGA 132081 |||| | ||| || ||| ||| | | || || | |||| | ||||||||||| Sbjct 2634285 TCATTTACAACATAGACCTGACCCAAAGATTGTTGAAAGAATTATTACTGAAGCAGTTGA 2634344 Query 132082 TATCGAGAAGGAGTTTATTACAGAAGCTTTGCCTTGCAATTTGATTGGGATGAATGCTGA 132141 || || || || || |||| || || ||||| | |||| | || |||||| | | Sbjct 2634345 AATTGAAAAAGAATTCTTTACTGATGCATTGCCAGTTAGTTTGTTGGGAATGAATTGTAA 2634404 Query 132142 CTCTATGAAGGAGTACATTGAATTCGTTGCTGA 132174 | ||| | || ||||||| ||||| || Sbjct 2634405 GTTGATGTGTCAATATGTTGAATTTGTTGCCGA 2634437 Score = 120 bits (132), Expect = 7e-22 Identities = 141/184 (77%), Gaps = 10/184 (5%) Strand=Plus/Minus Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368 ||||||| ||| ||||| || ||||||| | ||||||||| |||||||||||||| Sbjct 18741 CATTTGATGGACGATGATCCAGTCTTGTTCAACCGTCAACCATCATTGCATAAAATGTCT 18682 Query 305369 ATGATGGCTCATAAAGTCAAAGTATTAT-CTGGATT-GACATTTCGATTAAA--TGTAAG 305424 |||||||| || | ||| || | |||| | ||| ||||| ||||||| ||| || Sbjct 18681 ATGATGGCGCACAGAGTGAAGG--TTATGCCATATTCTACATTCAGATTAAACTTGTCAG 18624 Query 305425 T-GCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTC 305483 | ||| | || |||||||| ||||| ||||| || |||||||| |||||||||||| Sbjct 18623 TAACTT---CACCGTATAATGCCGATTTCGATGGTGACGAAATGAACTTGCATGTACCTC 18567 Query 305484 AATC 305487 |||| Sbjct 18566 AATC 18563 >seq14 Length=365783 Score = 93.3 bits (102), Expect = 1e-13 Identities = 117/156 (75%), Gaps = 6/156 (4%) Strand=Plus/Plus Query 305336 TTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTA 305395 |||||| | || || ||| |||||| | | || || |||| ||| | | |||||| | Sbjct 309761 TTCAATCGTCAGCCTTCATTGCATAGATTATCCATTTTGGCGCATTATGCCAAAGT-TCG 309819 Query 305396 TC--TGGATTGACATTTC-GATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTT 305452 || |||| || |||| |||| |||| ||| || || ||||||||||| |||||| Sbjct 309820 TCCTTGGA--GAACTTTCAGATTGAATGAGTGTGTATGCACACCTTATAATGCCGATTTT 309877 Query 305453 GATGGAGATGAAATGAATATGCATGTACCTCAATCA 305488 ||||| |||||||||||| | ||||| |||||| || Sbjct 309878 GATGGGGATGAAATGAATTTACATGTTCCTCAAACA 309913 >seq3 Length=625561 Score = 93.3 bits (102), Expect = 1e-13 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 167248 CACCAGCATTATCGAATTCATTCGCATAATTTGGTGCTGAAAATACAGTAACTAATTTAC 167307 ||||||||||||| || ||| |||||| || |||||||||| ||||| |||| || Sbjct 372386 CACCAGCATTATCAAACTCACCACAATAATTGGGAGCTGAAAATAATGTAACCAATTGAC 372327 Query 167308 GATTGAAAAATAATTCATAACCATCTTCAACAACTTCATGGGCACG 167353 | || || |||||||| |||||||||||||||| ||| ||||| Sbjct 372326 GTTTACTGAAAAATTCATATCCATCTTCAACAACTTGATGAGCACG 372281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812206964479