Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq15 132 3e-26 seq6 114 8e-21 >seq15 Length=2091020 Score = 132 bits (146), Expect = 3e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | |||||||| |||| ||| |||||||| |||||||| ||||| Sbjct 2074786 ACCACCTCTCAATCTCAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGA 2074845 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | | || ||||||||||| || ||||||||||| | || |||||| | || Sbjct 2074846 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 2074905 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||||||| || || | || |||| ||| | ||||| |||||| | Sbjct 2074906 AATACCTTCTTTGTCTTGGATCTT-GGATTTGACATTGTCAATAGTGTCTGATGATTCAA 2074964 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || ||||| || || ||||| || || || |||||| Sbjct 2074965 CCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCATA 2075014 Score = 129 bits (142), Expect = 4e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | |||||||| || | ||| |||||||| |||||||| ||||| Sbjct 2075014 ACCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGA 2075073 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | | || ||||||||||| || ||||||||||| | || |||||| | || Sbjct 2075074 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 2075133 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||||||| || || | || |||| ||| | ||||| |||||| | Sbjct 2075134 AATACCTTCTTTGTCTTGGATCTT-GGATTTGACATTGTCAATAGTGTCTGATGATTCAA 2075192 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || ||||| || || ||||| || || || |||||| Sbjct 2075193 CCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCATA 2075242 Score = 129 bits (142), Expect = 4e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | |||||||| || | ||| |||||||| |||||||| ||||| Sbjct 2075242 ACCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGA 2075301 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | | || ||||||||||| || ||||||||||| | || |||||| | || Sbjct 2075302 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 2075361 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||||||| || || | || |||| ||| | ||||| |||||| | Sbjct 2075362 AATACCTTCTTTGTCTTGGATCTT-GGATTTGACATTGTCAATAGTGTCTGATGATTCAA 2075420 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || ||||| || || ||||| || || || |||||| Sbjct 2075421 CCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCATA 2075470 Score = 123 bits (136), Expect = 2e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | |||||||| || | ||| |||||||| |||||||| ||||| Sbjct 2075470 ACCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGA 2075529 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | | || ||||||||||| || ||||||||||| | || |||||| | || Sbjct 2075530 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 2075589 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||||||| || || | || |||| ||| | ||||| ||| || | Sbjct 2075590 AATACCTTCTTTGTCTTGGATCTT-GGATTTGACATTGTCAATAGTGTCTGATGACTCAA 2075648 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752 | || | ||||| || ||||| || || ||||| || || || ||||| || Sbjct 2075649 CCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCATTGT 2075700 >seq6 Length=960076 Score = 114 bits (126), Expect = 8e-21 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||||||||| | |||||||| || | ||| || ||||| |||||||| |||| Sbjct 22031 CACCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCGG 21972 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | | || | | || ||||||||||| || ||||| ||||| | || |||||| | | Sbjct 21971 ACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTG 21912 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | ||||| ||||| || || | | |||| ||| | |||||| ||| || Sbjct 21911 GGATTCCTTCCTTGTCTTGGATCTT-GGACTTGACATTGTCAATGGTGTCAGATGACTCA 21853 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | ||||| |||||||| || | ||||| |||||||| ||||| Sbjct 21852 ACTTCTAAAGTGATGGTTTTACCCGTAAGGGTTTTGACAAAGATTTGCAT 21803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703843762880