Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq6 123 6e-23
seq15 89.7 1e-12
>seq6
Length=960076
Score = 123 bits (136), Expect = 6e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|| || ||| |||||| || || || ||||| |||||||| ||||| || ||||||
Sbjct 21806 CAAATCTTTGTCAAAACCCTTACGGGTAAAACCATCACTTTAGAAGTTGAGTCATCTGAC 21865
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||| ||||| || |||||||| || || |||
Sbjct 21866 ACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCAGATCAACAA 21925
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||| | ||||| || || || || ||||||||||| || |||||| |||| |||||| ||
Sbjct 21926 AGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATC 21985
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
|| || || |||||| | ||| | || ||||||
Sbjct 21986 CAAAAGGAATCTACTTTGCACTTGGTGTTGAGA 22018
>seq15
Length=2091020
Score = 89.7 bits (98), Expect = 1e-12
Identities = 141/202 (70%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
|||||| | || || || || ||||| || || || ||| || ||||| | ||
Sbjct 2074999 CAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCAGACACTATTGACAA 2074940
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| || ||||| ||||| |||||||| ||| || || |||||| | || ||
Sbjct 2074939 TGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAACAAAGATTGATTTT 2074880
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|| || || || ||||||||||| || |||||| |||| |||||| | || ||||| ||
Sbjct 2074879 TGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATTCAAAAAGAATC 2074820
Query 206364 TACTCTTCACCTTGTTTTGAGA 206385
|| | ||| | || ||||||
Sbjct 2074819 CACATTACACTTGGTGTTGAGA 2074798
Score = 89.7 bits (98), Expect = 1e-12
Identities = 141/202 (70%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
|||||| | || || || || ||||| || || || ||| || ||||| | ||
Sbjct 2075227 CAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCAGACACTATTGACAA 2075168
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| || ||||| ||||| |||||||| ||| || || |||||| | || ||
Sbjct 2075167 TGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAACAAAGATTGATTTT 2075108
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|| || || || ||||||||||| || |||||| |||| |||||| | || ||||| ||
Sbjct 2075107 TGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATTCAAAAAGAATC 2075048
Query 206364 TACTCTTCACCTTGTTTTGAGA 206385
|| | ||| | || ||||||
Sbjct 2075047 CACATTGCACTTGGTGTTGAGA 2075026
Score = 89.7 bits (98), Expect = 1e-12
Identities = 141/202 (70%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
|||||| | || || || || ||||| || || || ||| || ||||| | ||
Sbjct 2075455 CAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCAGACACTATTGACAA 2075396
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| || ||||| ||||| |||||||| ||| || || |||||| | || ||
Sbjct 2075395 TGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAACAAAGATTGATTTT 2075336
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|| || || || ||||||||||| || |||||| |||| |||||| | || ||||| ||
Sbjct 2075335 TGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATTCAAAAAGAATC 2075276
Query 206364 TACTCTTCACCTTGTTTTGAGA 206385
|| | ||| | || ||||||
Sbjct 2075275 CACATTGCACTTGGTGTTGAGA 2075254
Score = 86.0 bits (94), Expect = 1e-11
Identities = 98/132 (74%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| |||||||| ||| || || |||||| | || || || || ||
Sbjct 2075613 AAGATCCAAGACAAAGAAGGTATTCCACCAGATCAACAAAGATTGATTTTTGCTGGTAAA 2075554
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| ||||||||||| || |||||| |||| |||||| | || ||||| || || | |||
Sbjct 2075553 CAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATTCAAAAAGAATCCACATTGCAC 2075494
Query 206374 CTTGTTTTGAGA 206385
| || ||||||
Sbjct 2075493 TTGGTGTTGAGA 2075482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181820209458919
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |