Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq6 123 6e-23 seq15 89.7 1e-12 >seq6 Length=960076 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| |||||| || || || ||||| |||||||| ||||| || |||||| Sbjct 21806 CAAATCTTTGTCAAAACCCTTACGGGTAAAACCATCACTTTAGAAGTTGAGTCATCTGAC 21865 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||| ||||| || |||||||| || || ||| Sbjct 21866 ACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCAGATCAACAA 21925 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | ||||| || || || || ||||||||||| || |||||| |||| |||||| || Sbjct 21926 AGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATC 21985 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || || || |||||| | ||| | || |||||| Sbjct 21986 CAAAAGGAATCTACTTTGCACTTGGTGTTGAGA 22018 >seq15 Length=2091020 Score = 89.7 bits (98), Expect = 1e-12 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | || || || || ||||| || || || ||| || ||||| | || Sbjct 2074999 CAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCAGACACTATTGACAA 2074940 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || || ||||| ||||| |||||||| ||| || || |||||| | || || Sbjct 2074939 TGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAACAAAGATTGATTTT 2074880 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || || || ||||||||||| || |||||| |||| |||||| | || ||||| || Sbjct 2074879 TGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATTCAAAAAGAATC 2074820 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 || | ||| | || |||||| Sbjct 2074819 CACATTACACTTGGTGTTGAGA 2074798 Score = 89.7 bits (98), Expect = 1e-12 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | || || || || ||||| || || || ||| || ||||| | || Sbjct 2075227 CAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCAGACACTATTGACAA 2075168 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || || ||||| ||||| |||||||| ||| || || |||||| | || || Sbjct 2075167 TGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAACAAAGATTGATTTT 2075108 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || || || ||||||||||| || |||||| |||| |||||| | || ||||| || Sbjct 2075107 TGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATTCAAAAAGAATC 2075048 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 || | ||| | || |||||| Sbjct 2075047 CACATTGCACTTGGTGTTGAGA 2075026 Score = 89.7 bits (98), Expect = 1e-12 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | || || || || ||||| || || || ||| || ||||| | || Sbjct 2075455 CAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCAGACACTATTGACAA 2075396 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || || ||||| ||||| |||||||| ||| || || |||||| | || || Sbjct 2075395 TGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAACAAAGATTGATTTT 2075336 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || || || ||||||||||| || |||||| |||| |||||| | || ||||| || Sbjct 2075335 TGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATTCAAAAAGAATC 2075276 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 || | ||| | || |||||| Sbjct 2075275 CACATTGCACTTGGTGTTGAGA 2075254 Score = 86.0 bits (94), Expect = 1e-11 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| |||||||| ||| || || |||||| | || || || || || Sbjct 2075613 AAGATCCAAGACAAAGAAGGTATTCCACCAGATCAACAAAGATTGATTTTTGCTGGTAAA 2075554 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || ||||||||||| || |||||| |||| |||||| | || ||||| || || | ||| Sbjct 2075553 CAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATTCAAAAAGAATCCACATTGCAC 2075494 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 2075493 TTGGTGTTGAGA 2075482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820209458919