Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq39 361 8e-95
>seq39
Length=2831396
Score = 361 bits (400), Expect = 8e-95
Identities = 1190/1838 (65%), Gaps = 29/1838 (2%)
Strand=Plus/Plus
Query 68413 TAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTG 68472
||||||||||| || || | ||| ||||||| || || ||||| ||||| | |||
Sbjct 2507586 TAGTACATACCTGTCTTTAATCCTTTCTTCCATCCATAAAAGTGCATGCTTGTCAATTTA 2507645
Query 68473 GAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCT 68532
||||||| || ||||| || | ||||| ||| |||||||| || ||
Sbjct 2507646 CCCATGGTTGGATCTTTGATGTGAATGTTTAATGATTGTGATTGGTCGATGAATGCAGCT 2507705
Query 68533 CTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATC 68592
||||| | ||||| | ||||| |||||| | |||||||||| ||| || | |
Sbjct 2507706 CTATCAGAAGCCATATCAATAATGTGCTTTTGCGAGATTTCCCAAACAGTTTTGTACAAT 2507765
Query 68593 TGTTTGATATCATCTGGAAGGCTCGT---ATTTTGAATGGATCCACCATCGGATATAATT 68649
||||| || ||||||| | | | | ||||||||| ||| | || |||||
Sbjct 2507766 GCCTTGATTTCGTCTGGAATGTTTGGCAAAGCTTGAATGGAACCATTGTTTGAAATAATG 2507825
Query 68650 ATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGA 68709
|| |||| || | |||||||| | | | || ||| || | | | | |||
Sbjct 2507826 CTACTCTTCATAGCGTCATTCCAAATTCCTAAATCAACCAAATCTTTCAACAAGTATGGA 2507885
Query 68710 TTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGT 68769
||||| |||||||| || |||| |||||||| | || ||||||||| || |||||
Sbjct 2507886 TTAACAATTTGAAACTCACCAGCCAACACTCTTCTAGAGTAAATATTTGAAGTGTATGGC 2507945
Query 68770 TCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACC 68829
|| | | ||||||| || |||| |||||| | || || ||||| ||||| || ||||||
Sbjct 2507946 TCGAAACATTCATTGTTACCCAAAATTTGTGATGTAGAAGCAGTAGGCATTGGAGCCACC 2508005
Query 68830 AATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAA 68889
|| || ||||| | ||| ||| | | || ||||| | | | |||||||||
Sbjct 2508006 AACAAGGAGTTTCTCATACCGTGTTTGGCAAGCTTTTCTTTCAATTCATCCCAATCCCAC 2508065
Query 68890 AGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGAT 68949
| |||| ||| ||||| | |||||||| | | || | ||| |||
Sbjct 2508066 AATTCAGTTGGCTTTCTGTTCCACAAGTCGTATTGCAACAAACCTTGCGATGCTGGTGAG 2508125
Query 68950 CCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCA 69009
|| | || |||||||| || ||||| | | |||| |||| ||| || | |||
Sbjct 2508126 CCTTGGTAAGTTTCATAGGGACCTTCTTCCGCCGCTAATTCAATTGATGCTTCAACAGCA 2508185
Query 69010 CCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAAT 69069
| | ||| |||||||| ||||| | |||| | || |||||| | ||| |||
Sbjct 2508186 GCATGATAGATTGTTTCAAAAATTTGAATATTCAATTCCCTAGCTTCTTGGGAATCAAAT 2508245
Query 69070 G-GATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCT 69128
||| | |||| ||||||||||| ||||| || || || || | | || |||||
Sbjct 2508246 CCGATTCTC-AAAACCATAAATGCATCAGCCAAGCCTTGGACACCCAAGGCAATTGGTCT 2508304
Query 69129 ATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTT 69188
|||||| | ||||| || |||||||| |||| || || || || ||| || | | |
Sbjct 2508305 GTGTCTCATGTTTGATCTCTCAGCTTCAGGAACTGGGTAGTAGTTTCGATCAATGACTCT 2508364
Query 69189 ATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAAT----CAAATC 69244
||| | ||| || || ||||| ||||| | | ||| ||| | | || |
Sbjct 2508365 ATTCAAATTACGTGTAACAACTTTGGTGACGTCATGCAACTTGTCAAAGTTGTACCAAGC 2508424
Query 69245 GT-----CCATC---TATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGC 69296
| ||||| || ||| | | || | || || | |||||||| ||
Sbjct 2508425 ATGCTTACCATCCTGCTCAATAAAAGAAGGTAAAGCAATCGAAGCCAAGTTACAAACAGC 2508484
Query 69297 TACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGT 69356
|| |||| | | ||||| | || || ||| | || | |||| |||
Sbjct 2508485 AACTTCATCTGGTGCCGAATATTCAACAATTTCACAACACAAGTTGGAAGATTTAATAAC 2508544
Query 69357 CCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGT 69416
|||| ||||| || || ||| ||||||| || |||||||| | || || || ||
Sbjct 2508545 ACCCAAATTTTTTTGGTTGGACTTGGTGTTACAAGCATCCTTGTACAACATGAATGGGGT 2508604
Query 69417 ACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGT 69476
|||||| ||| | || | || | || || | ||| | ||| || ||| ||
Sbjct 2508605 ACCAGTCTCAGTTTGTGCCTCCAAGATGGAATACCACAATTTTTGAGCTTTGATT---GT 2508661
Query 69477 C-TTGTA--ACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCA 69533
| || || ||| ||||| || |||| ||| | | | ||||| || || |
Sbjct 2508662 CTTTCTACCACGACCTTCTTTCTCGTATTTCTCATACAACTCAACAAATTCGTCACCATA 2508721
Query 69534 AACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTT 69593
| |||| |||| ||| |||||||||| | | ||||| ||| || ||| | ||
Sbjct 2508722 AGTATCAGCCAAGTTTGGAGCTTCATTTGGAGAGAACAATGTCCAATCACCATTTTGCTC 2508781
Query 69594 AACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATT 69653
||||| ||||||||| | ||| || ||||| | |||| || | ||||| | |||| |
Sbjct 2508782 AACTCTTTTCATAAACAAATCTGGGATCCACAAAGCTGGGAACAAGTCTCTAGCTCTAAT 2508841
Query 69654 TTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGG 69713
|||||| || || || ||| ||| || | || || | ||||||| ||||||||
Sbjct 2508842 TTCTTCCTTACCATGGTTCTTTCTAATTTCAATGAAGTCAAAGATATCAGCGTGCCATGG 2508901
Query 69714 TTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGC 69773
||| ||||||| || | | || |||| || || || || ||||| | || | ||
Sbjct 2508902 TTCAAGATATAAAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCCACATAACGAGC 2508961
Query 69774 AGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGA 69833
|||||| || | || | | ||| |||||||||||||| || |||| || || ||||
Sbjct 2508962 AGTGTTGTTGAAAACACGAACCATTGGAATAATACCATTTGAAGTACCGTTGGTACCAGC 2509021
Query 69834 AATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTT 69893
|| || || | | ||||| || ||| | || || || || || ||||
Sbjct 2509022 GATGTAGGCACCAGTGGAACGAATGTTGTGGATATGCAATCCAATACCACCAGCACTTTT 2509081
Query 69894 AGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCA- 69952
|| || | ||||| || || |||||||| ||||| || || ||| ||| |||
Sbjct 2509082 TGAAATCAAGGCACATGTCTTTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCAT 2509141
Query 69953 TGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAG 70012
|| | |||||| || | |||||||| | | | ||| || ||||| || || |
Sbjct 2509142 TGCAACCAAGAAACAAGAT-GACATTTGTGGTTTTGGAGTACCGGCATTGAACAAACATG 2509200
Query 70013 GAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTA 70072
|||| | ||||| || || ||| ||| | || |||||| || |||||| || | |
Sbjct 2509201 GAGAACCATGAGTAAAGTATCTTTGAGACATCAAATTGTAAGTCTCAATAACTCTTGGGA 2509260
Query 70073 TATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCG 70132
|||| | ||| || || || || || | ||| | || || || |||| ||| |
Sbjct 2509261 TATCTCTTCCATGGATACCAATAGCAACTCTCATAATCAAGTGTTGTGGTCTTTCAGCAA 2509320
Query 70133 TTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGT 70192
||| ||| || |||| |||||| | |||| |||||| || ||||| || ||||
Sbjct 2509321 CTTTTCCATTAATACGTAACAAATATGATCTCTCCAAAGTTTTGAATCCAAAGTAATTGT 2509380
Query 70193 A--TGAAAAGTCTCTTTCGTAAATAATAACAGAATTTA 70228
| ||||| || | || |||| ||| | || ||||
Sbjct 2509381 AGTTGAAA--TCACGGTCATAAACAATTGCTGAGTTTA 2509416
Score = 315 bits (348), Expect = 1e-80
Identities = 607/885 (69%), Gaps = 24/885 (3%)
Strand=Plus/Minus
Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385
|||||||| ||| ||| | ||| || || ||||| || || || |||| || |||||
Sbjct 2634563 TTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTC 2634504
Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATA---tttttttttAAATCCTAATTCTGAA 39442
||||| |||||||| ||||| || |||| || |||||| ||| || || |
Sbjct 2634503 TCCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTTTGTTAC--CCAAAGCAACCA 2634446
Query 39443 ATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATG 39502
|| ||||| || ||||||||||| | ||| ||||| | |||||||||||| |
Sbjct 2634445 AT-AATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAAC 2634387
Query 39503 AGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATT 39562
| ||||||| | || || || | || |||||||| || || || || || || ||
Sbjct 2634386 AAACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATA 2634327
Query 39563 ATCGATGTTACTACCTCATCACTCGGT--GG---ATGCAATAAATGTTTAAACATTAAGC 39617
|| | || | || ||| | ||| || ||| |||||| ||||| ||||
Sbjct 2634326 AT---TCTTTCAACA--ATCTTTGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGC 2634272
Query 39618 AGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTC 39677
| || || ||| |||| || ||||| | || ||| ||||| || ||||| || | ||
Sbjct 2634271 ATGCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATC 2634212
Query 39678 CAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGA 39737
| ||||||| || | ||| || | ||| || |||| |||||| |||||| || ||||
Sbjct 2634211 CTGGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGA 2634152
Query 39738 TGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATC---ATTATGTA 39794
| || || || || ||||| ||||| | |||||| | | || ||| || || |
Sbjct 2634151 TACCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTGAA 2634092
Query 39795 TCCA-CTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 39853
|||| || || ||||||||||| ||||| || | ||| || ||||| ||||||||
Sbjct 2634091 TCCATCTGATG-GCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTG 2634033
Query 39854 AAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATT 39913
|| | ||| ||| | ||| || | ||| || || || || | ||| ||
Sbjct 2634032 AATAAGAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAGTT 2633973
Query 39914 TCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATT 39973
|||||||| |||||||| ||| || || || || ||||| || | ||||||| ||||
Sbjct 2633972 TCTGAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATT 2633913
Query 39974 TGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCA 40033
|| || || | | |||| ||||| |||| |||||||| || || |||||| || ||
Sbjct 2633912 TGAACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCG 2633853
Query 40034 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTAT---TCCAG 40090
||||| ||||| | | ||| ||| | |||||| | ||||||| | ||||
Sbjct 2633852 AAAAAGGCCAAGATTCTTCCAATGAAAAACCTTTCATTGTCATTCAATTTCTCTCTCCAA 2633793
Query 40091 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTT 40150
|||| | |||||| || ||| | |||||| || ||||| || || || || |||||
Sbjct 2633792 TCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTTC 2633733
Query 40151 TTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACA 40195
|||||||| | ||| || ||| | ||| || ||||| || |||
Sbjct 2633732 TTGTACATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACA 2633688
Score = 118 bits (130), Expect = 1e-21
Identities = 518/803 (65%), Gaps = 19/803 (2%)
Strand=Plus/Minus
Query 68362 TCCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATA 68421
|||||||| | || || || |||| | | || | || ||| |||| || |||||
Sbjct 923413 TCCTTATCAACAGTGAATTGGATGGCTCTCGCAGCAGCTTGTGTTCGTAAGTAATACATG 923354
Query 68422 CCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTT 68481
|| ||||||| |||| ||| | | ||||| || || ||||| ||
Sbjct 923353 CCCGTTTTCAAACCTTTTTCCCAGGCATGAAAATGACAGCTGGTGAGTTTACCTATGGTT 923294
Query 68482 GGAT-CGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGC 68540
|||| | || |||| ||||||||| ||| ||| |||||||| ||||||||||||
Sbjct 923293 GGATTCAGC-ATATAAATATTCATGCTTTGCAGTTGGTCGATGAACTTTCCTCTATCTGC 923235
Query 68541 CGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGAT 68600
||||| | ||| ||| |||||| | ||||||| || ||| | | | ||
Sbjct 923234 AGCCATATCTATGATATCCTTTTGTTTCAACTCCCAAACTGTTCGGTAAAGTTTTCTAAT 923175
Query 68601 ATCATCTGG-AAGGCTCG--TATTTTGAATGGATCCACCATCGGATATAATTAT-ATTCT 68656
||| | || | || | ||||||| || ||||||||||| || ||| | | ||
Sbjct 923174 ATCCCCAGGTATCACTGGTATATTTTGGATTGATCCACCATCTTGAATGATTTTGCTCCT 923115
Query 68657 TGAT-CTCATCATTCCACAATTTTC-TCTCCGTTAAAACTCTAAGGAGATGCGGATTAAC 68714
| || || | |||||| |||| | ||| ||| | || | ||||| | || ||
Sbjct 923114 TAATGCTGA--ATTCCA-AATTCCCAAATCCACCAAATCCCTTATGAGATACTTGTTCAC 923058
Query 68715 TATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCAC 68774
| ||||||||| || |||| ||||| |||||| || | || ||| |||||||| |
Sbjct 923057 CACTTGAAATTCGCCTGATATCACTCGACGAGTATACAAGTTGGAGGTGTATGGTTCGAA 922998
Query 68775 AGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAA 68834
| | ||||| || | ||||||| ||||| ||||| ||||| || || || || |
Sbjct 922997 ACACTCATTGAACCCTAAGATTTGAGATGTTGAAGCAGTAGGCATGGGAGCTACTAAAAG 922938
Query 68835 ACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATC-CCAAAGA- 68892
||||| | ||||| | | | |||||||||| || | ||| || || |||
Sbjct 922937 TGAGTTTCTCAACCCATGACTCCTCACATTATCTTTTAACTGATCCCAGTCATCATAGAA 922878
Query 68893 -TCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCC 68951
|| |||| |||||| | ||| |||| | ||| || | || |||||
Sbjct 922877 TTC---TGGTTTTTGATTCCACATATCAAATTGCAAAATGCCTTGCGAAGCTGGAGATCC 922821
Query 68952 ATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACC 69011
| | | ||| ||||| || || || || || |||| ||||||| ||| |
Sbjct 922820 AGCAAAGGTTGAGTAAGGACCCTCAAGTATAGATAATTCAAGTGAGGCCTCTACAGCAGC 922761
Query 69012 GTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGG 69071
| ||| || ||||| || || | | |||||| | || || |||||| || |||||
Sbjct 922760 ATGATAGATGGTTTCAAAGATTTGCGAATTGAGTTTTTTAGCCTCTAGAGAGTCAAATGG 922701
Query 69072 ATAATGT-AAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTAT 69130
||| | || | |||| ||| || | || || || || ||| | || |||| ||
Sbjct 922700 -TAACCTCAATTCGAGAAATAAATCAGCTAGACCTTGTACGCCTATAGCTATTGGTCGAT 922642
Query 69131 GTCTCTTATTTGAACTTTCAGCT 69153
| || ||||| ||||| |||
Sbjct 922641 TCTTTTTGTTTGATCTTTCCGCT 922619
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908465131960
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