Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq39 361 8e-95 >seq39 Length=2831396 Score = 361 bits (400), Expect = 8e-95 Identities = 1190/1838 (65%), Gaps = 29/1838 (2%) Strand=Plus/Plus Query 68413 TAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTG 68472 ||||||||||| || || | ||| ||||||| || || ||||| ||||| | ||| Sbjct 2507586 TAGTACATACCTGTCTTTAATCCTTTCTTCCATCCATAAAAGTGCATGCTTGTCAATTTA 2507645 Query 68473 GAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCT 68532 ||||||| || ||||| || | ||||| ||| |||||||| || || Sbjct 2507646 CCCATGGTTGGATCTTTGATGTGAATGTTTAATGATTGTGATTGGTCGATGAATGCAGCT 2507705 Query 68533 CTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATC 68592 ||||| | ||||| | ||||| |||||| | |||||||||| ||| || | | Sbjct 2507706 CTATCAGAAGCCATATCAATAATGTGCTTTTGCGAGATTTCCCAAACAGTTTTGTACAAT 2507765 Query 68593 TGTTTGATATCATCTGGAAGGCTCGT---ATTTTGAATGGATCCACCATCGGATATAATT 68649 ||||| || ||||||| | | | | ||||||||| ||| | || ||||| Sbjct 2507766 GCCTTGATTTCGTCTGGAATGTTTGGCAAAGCTTGAATGGAACCATTGTTTGAAATAATG 2507825 Query 68650 ATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGA 68709 || |||| || | |||||||| | | | || ||| || | | | | ||| Sbjct 2507826 CTACTCTTCATAGCGTCATTCCAAATTCCTAAATCAACCAAATCTTTCAACAAGTATGGA 2507885 Query 68710 TTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGT 68769 ||||| |||||||| || |||| |||||||| | || ||||||||| || ||||| Sbjct 2507886 TTAACAATTTGAAACTCACCAGCCAACACTCTTCTAGAGTAAATATTTGAAGTGTATGGC 2507945 Query 68770 TCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACC 68829 || | | ||||||| || |||| |||||| | || || ||||| ||||| || |||||| Sbjct 2507946 TCGAAACATTCATTGTTACCCAAAATTTGTGATGTAGAAGCAGTAGGCATTGGAGCCACC 2508005 Query 68830 AATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAA 68889 || || ||||| | ||| ||| | | || ||||| | | | ||||||||| Sbjct 2508006 AACAAGGAGTTTCTCATACCGTGTTTGGCAAGCTTTTCTTTCAATTCATCCCAATCCCAC 2508065 Query 68890 AGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGAT 68949 | |||| ||| ||||| | |||||||| | | || | ||| ||| Sbjct 2508066 AATTCAGTTGGCTTTCTGTTCCACAAGTCGTATTGCAACAAACCTTGCGATGCTGGTGAG 2508125 Query 68950 CCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCA 69009 || | || |||||||| || ||||| | | |||| |||| ||| || | ||| Sbjct 2508126 CCTTGGTAAGTTTCATAGGGACCTTCTTCCGCCGCTAATTCAATTGATGCTTCAACAGCA 2508185 Query 69010 CCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAAT 69069 | | ||| |||||||| ||||| | |||| | || |||||| | ||| ||| Sbjct 2508186 GCATGATAGATTGTTTCAAAAATTTGAATATTCAATTCCCTAGCTTCTTGGGAATCAAAT 2508245 Query 69070 G-GATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCT 69128 ||| | |||| ||||||||||| ||||| || || || || | | || ||||| Sbjct 2508246 CCGATTCTC-AAAACCATAAATGCATCAGCCAAGCCTTGGACACCCAAGGCAATTGGTCT 2508304 Query 69129 ATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTT 69188 |||||| | ||||| || |||||||| |||| || || || || ||| || | | | Sbjct 2508305 GTGTCTCATGTTTGATCTCTCAGCTTCAGGAACTGGGTAGTAGTTTCGATCAATGACTCT 2508364 Query 69189 ATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAAT----CAAATC 69244 ||| | ||| || || ||||| ||||| | | ||| ||| | | || | Sbjct 2508365 ATTCAAATTACGTGTAACAACTTTGGTGACGTCATGCAACTTGTCAAAGTTGTACCAAGC 2508424 Query 69245 GT-----CCATC---TATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGC 69296 | ||||| || ||| | | || | || || | |||||||| || Sbjct 2508425 ATGCTTACCATCCTGCTCAATAAAAGAAGGTAAAGCAATCGAAGCCAAGTTACAAACAGC 2508484 Query 69297 TACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGT 69356 || |||| | | ||||| | || || ||| | || | |||| ||| Sbjct 2508485 AACTTCATCTGGTGCCGAATATTCAACAATTTCACAACACAAGTTGGAAGATTTAATAAC 2508544 Query 69357 CCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGT 69416 |||| ||||| || || ||| ||||||| || |||||||| | || || || || Sbjct 2508545 ACCCAAATTTTTTTGGTTGGACTTGGTGTTACAAGCATCCTTGTACAACATGAATGGGGT 2508604 Query 69417 ACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGT 69476 |||||| ||| | || | || | || || | ||| | ||| || ||| || Sbjct 2508605 ACCAGTCTCAGTTTGTGCCTCCAAGATGGAATACCACAATTTTTGAGCTTTGATT---GT 2508661 Query 69477 C-TTGTA--ACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCA 69533 | || || ||| ||||| || |||| ||| | | | ||||| || || | Sbjct 2508662 CTTTCTACCACGACCTTCTTTCTCGTATTTCTCATACAACTCAACAAATTCGTCACCATA 2508721 Query 69534 AACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTT 69593 | |||| |||| ||| |||||||||| | | ||||| ||| || ||| | || Sbjct 2508722 AGTATCAGCCAAGTTTGGAGCTTCATTTGGAGAGAACAATGTCCAATCACCATTTTGCTC 2508781 Query 69594 AACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATT 69653 ||||| ||||||||| | ||| || ||||| | |||| || | ||||| | |||| | Sbjct 2508782 AACTCTTTTCATAAACAAATCTGGGATCCACAAAGCTGGGAACAAGTCTCTAGCTCTAAT 2508841 Query 69654 TTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGG 69713 |||||| || || || ||| ||| || | || || | ||||||| |||||||| Sbjct 2508842 TTCTTCCTTACCATGGTTCTTTCTAATTTCAATGAAGTCAAAGATATCAGCGTGCCATGG 2508901 Query 69714 TTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGC 69773 ||| ||||||| || | | || |||| || || || || ||||| | || | || Sbjct 2508902 TTCAAGATATAAAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCCACATAACGAGC 2508961 Query 69774 AGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGA 69833 |||||| || | || | | ||| |||||||||||||| || |||| || || |||| Sbjct 2508962 AGTGTTGTTGAAAACACGAACCATTGGAATAATACCATTTGAAGTACCGTTGGTACCAGC 2509021 Query 69834 AATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTT 69893 || || || | | ||||| || ||| | || || || || || |||| Sbjct 2509022 GATGTAGGCACCAGTGGAACGAATGTTGTGGATATGCAATCCAATACCACCAGCACTTTT 2509081 Query 69894 AGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCA- 69952 || || | ||||| || || |||||||| ||||| || || ||| ||| ||| Sbjct 2509082 TGAAATCAAGGCACATGTCTTTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCAT 2509141 Query 69953 TGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAG 70012 || | |||||| || | |||||||| | | | ||| || ||||| || || | Sbjct 2509142 TGCAACCAAGAAACAAGAT-GACATTTGTGGTTTTGGAGTACCGGCATTGAACAAACATG 2509200 Query 70013 GAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTA 70072 |||| | ||||| || || ||| ||| | || |||||| || |||||| || | | Sbjct 2509201 GAGAACCATGAGTAAAGTATCTTTGAGACATCAAATTGTAAGTCTCAATAACTCTTGGGA 2509260 Query 70073 TATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCG 70132 |||| | ||| || || || || || | ||| | || || || |||| ||| | Sbjct 2509261 TATCTCTTCCATGGATACCAATAGCAACTCTCATAATCAAGTGTTGTGGTCTTTCAGCAA 2509320 Query 70133 TTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGT 70192 ||| ||| || |||| |||||| | |||| |||||| || ||||| || |||| Sbjct 2509321 CTTTTCCATTAATACGTAACAAATATGATCTCTCCAAAGTTTTGAATCCAAAGTAATTGT 2509380 Query 70193 A--TGAAAAGTCTCTTTCGTAAATAATAACAGAATTTA 70228 | ||||| || | || |||| ||| | || |||| Sbjct 2509381 AGTTGAAA--TCACGGTCATAAACAATTGCTGAGTTTA 2509416 Score = 315 bits (348), Expect = 1e-80 Identities = 607/885 (69%), Gaps = 24/885 (3%) Strand=Plus/Minus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 |||||||| ||| ||| | ||| || || ||||| || || || |||| || ||||| Sbjct 2634563 TTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTC 2634504 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATA---tttttttttAAATCCTAATTCTGAA 39442 ||||| |||||||| ||||| || |||| || |||||| ||| || || | Sbjct 2634503 TCCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTTTGTTAC--CCAAAGCAACCA 2634446 Query 39443 ATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATG 39502 || ||||| || ||||||||||| | ||| ||||| | |||||||||||| | Sbjct 2634445 AT-AATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAAC 2634387 Query 39503 AGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATT 39562 | ||||||| | || || || | || |||||||| || || || || || || || Sbjct 2634386 AAACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATA 2634327 Query 39563 ATCGATGTTACTACCTCATCACTCGGT--GG---ATGCAATAAATGTTTAAACATTAAGC 39617 || | || | || ||| | ||| || ||| |||||| ||||| |||| Sbjct 2634326 AT---TCTTTCAACA--ATCTTTGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGC 2634272 Query 39618 AGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTC 39677 | || || ||| |||| || ||||| | || ||| ||||| || ||||| || | || Sbjct 2634271 ATGCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATC 2634212 Query 39678 CAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGA 39737 | ||||||| || | ||| || | ||| || |||| |||||| |||||| || |||| Sbjct 2634211 CTGGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGA 2634152 Query 39738 TGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATC---ATTATGTA 39794 | || || || || ||||| ||||| | |||||| | | || ||| || || | Sbjct 2634151 TACCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTGAA 2634092 Query 39795 TCCA-CTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 39853 |||| || || ||||||||||| ||||| || | ||| || ||||| |||||||| Sbjct 2634091 TCCATCTGATG-GCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTG 2634033 Query 39854 AAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATT 39913 || | ||| ||| | ||| || | ||| || || || || | ||| || Sbjct 2634032 AATAAGAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAGTT 2633973 Query 39914 TCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATT 39973 |||||||| |||||||| ||| || || || || ||||| || | ||||||| |||| Sbjct 2633972 TCTGAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATT 2633913 Query 39974 TGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCA 40033 || || || | | |||| ||||| |||| |||||||| || || |||||| || || Sbjct 2633912 TGAACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCG 2633853 Query 40034 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTAT---TCCAG 40090 ||||| ||||| | | ||| ||| | |||||| | ||||||| | |||| Sbjct 2633852 AAAAAGGCCAAGATTCTTCCAATGAAAAACCTTTCATTGTCATTCAATTTCTCTCTCCAA 2633793 Query 40091 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTT 40150 |||| | |||||| || ||| | |||||| || ||||| || || || || ||||| Sbjct 2633792 TCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTTC 2633733 Query 40151 TTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACA 40195 |||||||| | ||| || ||| | ||| || ||||| || ||| Sbjct 2633732 TTGTACATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACA 2633688 Score = 118 bits (130), Expect = 1e-21 Identities = 518/803 (65%), Gaps = 19/803 (2%) Strand=Plus/Minus Query 68362 TCCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATA 68421 |||||||| | || || || |||| | | || | || ||| |||| || ||||| Sbjct 923413 TCCTTATCAACAGTGAATTGGATGGCTCTCGCAGCAGCTTGTGTTCGTAAGTAATACATG 923354 Query 68422 CCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTT 68481 || ||||||| |||| ||| | | ||||| || || ||||| || Sbjct 923353 CCCGTTTTCAAACCTTTTTCCCAGGCATGAAAATGACAGCTGGTGAGTTTACCTATGGTT 923294 Query 68482 GGAT-CGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGC 68540 |||| | || |||| ||||||||| ||| ||| |||||||| |||||||||||| Sbjct 923293 GGATTCAGC-ATATAAATATTCATGCTTTGCAGTTGGTCGATGAACTTTCCTCTATCTGC 923235 Query 68541 CGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGAT 68600 ||||| | ||| ||| |||||| | ||||||| || ||| | | | || Sbjct 923234 AGCCATATCTATGATATCCTTTTGTTTCAACTCCCAAACTGTTCGGTAAAGTTTTCTAAT 923175 Query 68601 ATCATCTGG-AAGGCTCG--TATTTTGAATGGATCCACCATCGGATATAATTAT-ATTCT 68656 ||| | || | || | ||||||| || ||||||||||| || ||| | | || Sbjct 923174 ATCCCCAGGTATCACTGGTATATTTTGGATTGATCCACCATCTTGAATGATTTTGCTCCT 923115 Query 68657 TGAT-CTCATCATTCCACAATTTTC-TCTCCGTTAAAACTCTAAGGAGATGCGGATTAAC 68714 | || || | |||||| |||| | ||| ||| | || | ||||| | || || Sbjct 923114 TAATGCTGA--ATTCCA-AATTCCCAAATCCACCAAATCCCTTATGAGATACTTGTTCAC 923058 Query 68715 TATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCAC 68774 | ||||||||| || |||| ||||| |||||| || | || ||| |||||||| | Sbjct 923057 CACTTGAAATTCGCCTGATATCACTCGACGAGTATACAAGTTGGAGGTGTATGGTTCGAA 922998 Query 68775 AGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAA 68834 | | ||||| || | ||||||| ||||| ||||| ||||| || || || || | Sbjct 922997 ACACTCATTGAACCCTAAGATTTGAGATGTTGAAGCAGTAGGCATGGGAGCTACTAAAAG 922938 Query 68835 ACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATC-CCAAAGA- 68892 ||||| | ||||| | | | |||||||||| || | ||| || || ||| Sbjct 922937 TGAGTTTCTCAACCCATGACTCCTCACATTATCTTTTAACTGATCCCAGTCATCATAGAA 922878 Query 68893 -TCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCC 68951 || |||| |||||| | ||| |||| | ||| || | || ||||| Sbjct 922877 TTC---TGGTTTTTGATTCCACATATCAAATTGCAAAATGCCTTGCGAAGCTGGAGATCC 922821 Query 68952 ATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACC 69011 | | | ||| ||||| || || || || || |||| ||||||| ||| | Sbjct 922820 AGCAAAGGTTGAGTAAGGACCCTCAAGTATAGATAATTCAAGTGAGGCCTCTACAGCAGC 922761 Query 69012 GTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGG 69071 | ||| || ||||| || || | | |||||| | || || |||||| || ||||| Sbjct 922760 ATGATAGATGGTTTCAAAGATTTGCGAATTGAGTTTTTTAGCCTCTAGAGAGTCAAATGG 922701 Query 69072 ATAATGT-AAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTAT 69130 ||| | || | |||| ||| || | || || || || ||| | || |||| || Sbjct 922700 -TAACCTCAATTCGAGAAATAAATCAGCTAGACCTTGTACGCCTATAGCTATTGGTCGAT 922642 Query 69131 GTCTCTTATTTGAACTTTCAGCT 69153 | || ||||| ||||| ||| Sbjct 922641 TCTTTTTGTTTGATCTTTCCGCT 922619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908465131960