Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq39 262 3e-65
>seq39
Length=2831396
Score = 262 bits (290), Expect = 3e-65
Identities = 594/878 (68%), Gaps = 35/878 (4%)
Strand=Plus/Plus
Query 43702 TGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTC 43761
|||| ||||||| ||| ||| ||||| || |||||||||||||| || || | || ||
Sbjct 2633688 TGTCATGTTTCCTATTAGATACCATGAAATTTGGCAAATGTACAAGAAGGCTGAAGCATC 2633747
Query 43762 ATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGA-CTTAGCAC-ATTGGATTGC--AT 43817
||| ||||| ||||||||| ||||||| |||||| ||| || |||||| | |
Sbjct 2633748 ATTCTGGACTGCAGAAGAAATTGATTTAGGTAAAGATCTT--CATGATTGGAGAGAGAAA 2633805
Query 43818 TAAAACCACAAGAAAAACATTTTATATCTTTGG-----TTTTGGCGTTTTTTGCTGCGAG 43872
| || |||| ||| |||| | |||| | ||||| ||||| |||||
Sbjct 2633806 TTGAATGACAATGAAAGGTTTTT----CATTGGAAGAATCTTGGCCTTTTTCGCTGCCTC 2633861
Query 43873 CGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGA 43932
|| || || || |||||||| ||||| ||| | ||||||||| | || ||
Sbjct 2633862 TGATGGTATTGTTAATGAAAACTTGGTGGAAAACTTTTCTGCTGAAGTTCAAATTCCTGA 2633921
Query 43933 AGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTA--C 43990
||| || |||||||| || ||||| || ||||| |||||||| |||| || |
Sbjct 2633922 AGCCAAATCATTTTATGGTTTCCAAATCATGATGGAAAACATTCATTCAGAAACTTATTC 2633981
Query 43991 AGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGC--ATCGATTGTTTAATG 44048
| | || ||| || || || ||||| ||| || ||||| || || || ||||
Sbjct 2633982 ATTATT--GATTGAAACTTATATCAAGGATC--CAAAGGAAGCCGATTTCTTATTCAATG 2634037
Query 44049 CGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT---AA 44105
| || ||||| | ||| |||||| | || || || |||||| | | |||||| |
Sbjct 2634038 CTATTGAAACCATCCCTCAAATTAAAAAGAAGGCTGATTGGGCCATCAGATGGATTCAAG 2634097
Query 44106 ATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCT 44165
|||| ||| | |||| || || | || || ||||| | ||| || || || ||
Sbjct 2634098 ATTCCGATGCATTGTTTGCTGAGAGATTGGTTGCTTTTGCTGCTGTTGAGGGTATCTT-- 2634155
Query 44166 TTTCAG--GATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTT 44223
|||||| |||||||||| |||| || ||||| ||||| |||| || ||||| || ||
Sbjct 2634156 TTTCAGTGGATCGTTTGCTTCCATTTTCTGGTTGAAGAAGAGAGGATTAATGCCAGGATT 2634215
Query 44224 GACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTT 44283
||| ||||| ||||| || || ||||||||||||| ||||| |||||||| |||||
Sbjct 2634216 GACCTTTTCCAATGAATTGATTTGTCGTGATGAAGGTTTACACACTGATTTTGCATGCTT 2634275
Query 44284 GTTACTTGGATATCTAGGAGACGATAAGCCTTCATGTAAGACAATT-ACAGATATTGTTG 44342
||| ||| || | | | ||| ||| |||| || | ||| ||| ||
Sbjct 2634276 GTTGTTTGCTCATTT---ACAACATAGACCTGACCCAAAGATTGTTGAAAGA-ATTATTA 2634331
Query 44343 TAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAG 44402
|| ||||| | || ||| ||||||| | || ||||| || || | ||| | |
Sbjct 2634332 CTGAAGCAGTTGAAATTGAAAAAGAATTCTTTACTGATGCATTGCCAGTTAGTTTGTTGG 2634391
Query 44403 GAATGAATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGG 44462
|||||||| |||||| |||||| |||||| |||| || | ||| | | |
Sbjct 2634392 GAATGAATTGTAAGTTGATGTGTCAATATGTTGAATTTGTTGCCGACAGATTATTGGTTG 2634451
Query 44463 AACTGGGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTT 44522
||||| | | ||| || | ||| || || |||||||||||||| ||||| |
Sbjct 2634452 CTTTGGGTAACAAAAAAGTTTACAATGTCACCAATCCATTTGATTTTATGGAGAATATCT 2634511
Query 44523 CGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTT 44560
| |||| || || || || || ||||||||| | |||
Sbjct 2634512 CCTTGGCTGGTAAGACCAATTTCTTTGAAAAAAGAGTT 2634549
Score = 156 bits (172), Expect = 3e-33
Identities = 303/445 (68%), Gaps = 12/445 (3%)
Strand=Plus/Minus
Query 19430 CCAAA-ATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488
||||| ||||| ||||| || ||||| || | |||||| || ||| || |||||||||
Sbjct 534512 CCAAAGATTGTTAATGGACCCGAAATGTTGAGTAAATACGTTGGTGCGTCTGAAGAAAAT 534453
Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGG-GCGCAAAAGTTC 19547
| || |||||| |||||||||| ||| | |||| | ||| | | | | |
Sbjct 534452 ATTCGTAATTTGTTCAAGGACGCTGAAGCTGAATATAAACTTAAAGGTGAGGACTCGGAC 534393
Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGG--- 19604
|| |||| |||| || | |||||||| || | | | ||| || |||||||||||
Sbjct 534392 TT-GCACGTTATTATTTTTGATGAATTAGATTCCGTTTTTAAACAGAGAGGTTCTGGAAA 534334
Query 19605 ------TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGG 19658
| || || || ||||| |||||| |||||| | ||||||| | || ||
Sbjct 534333 GAGTGACGGAACAGGGGTTGGTGACAATGTTGTGAATCAATTGTTGTCAAAGATGGATGG 534274
Query 19659 TGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGA 19718
|||| | || |||| |||||| | || ||||| ||||| |||||||| || || || ||
Sbjct 534273 TGTTGATCAGTTGAACAATATTCTTGTCATTGGTATGACCAATAGACTCGACTTGATTGA 534214
Query 19719 CAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGA 19778
| || || || |||| ||| | || ||||| |||| || ||| ||||| |||||
Sbjct 534213 TACTGCATTGTTGAGACCTGGTAGATTTGAAATTCAGATTGAGATTGCTTTACCAGATGA 534154
Query 19779 ATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAAAATAACCTTTT 19838
| || | ||| || || | ||||||||| || || || ||||| | | ||
Sbjct 534153 AAAAGGTAGAAAGGATATCTTTATGATACATACAAAAAAGTTGAGAGAAAATGGCTTGTT 534094
Query 19839 AAATGACGATGTAGATCTAGAAGAA 19863
|| | | ||||| |||| || |||
Sbjct 534093 AACTAAGGATGTCAATCTTGATGAA 534069
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455811084195
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |