Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq39 159 4e-34
seq6 84.2 3e-11
>seq39
Length=2831396
Score = 159 bits (176), Expect = 4e-34
Identities = 457/700 (65%), Gaps = 16/700 (2%)
Strand=Plus/Plus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
|| ||||| | ||||||||||| || || |||||||||||||| ||||| | ||| ||
Sbjct 2507925 TAAATATTTGAAGTGTATGGCTCGAAACATTCATTGTTACCCAAAATTTGTGATGTAGAA 2507984
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301
|| || ||||| || |||| | | | ||| | | ||| | || || |||
Sbjct 2507985 GCAGTAGGCATTGGAGCCACCAACAAGGAGTTTCTCATACCGTGTTTGGCAAGCTTTTCT 2508044
Query 118302 TTGAGAGCGTCCCAGTCGTAG--TTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGA 118359
|| | | ||||| || | || || ||| || | | ||||| || | || |
Sbjct 2508045 TTCAATTCATCCCAATCCCACAATTCAG--TTGGCTTTCTGTTCCACAAGTCGTATTGCA 2508102
Query 118360 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCA 118419
| |||||| || ||||| || || | | || ||||| || || || || |||| |
Sbjct 2508103 ACAAACCTTGCGATGCTGGTGAGCCTTGGTAAGTTTCATAGGGACCTTCTTCCGCCGCTA 2508162
Query 118420 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTG 118479
|||| || || | || || ||||| |||||||||||||| || ||||| |
Sbjct 2508163 ATTCAATTGATGCTTCAACAGCAGCATGATAGATTGTTTCAAAAATTTGAATATTCAATT 2508222
Query 118480 CCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTT 118539
|| | || || | ||||||||| ||| || | | |||||| |||| || | ||||
Sbjct 2508223 CCCTAGCTTCTTGGGAATCAAATCCGATTCTCAAAACCATAAATGCATCAGCCAAGCCTT 2508282
Query 118540 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGAT 118599
||||||| | | ||||||| | |||||||| || || || ||| || || |
Sbjct 2508283 GGACACCCAAGGCAATTGGTCTGTGTCTCATGTTTGATCTCTCAGCTTCAGGAACTGGGT 2508342
Query 118600 AAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAA 118659
| | || | ||| || || ||||| | ||| || ||||| || |||| ||||| |
Sbjct 2508343 AGTAGTTTCGATCAATGACTCTATTCAAATTACGTGTAACAACTTTGGTGACGTCATGCA 2508402
Query 118660 GCTTTTC---GT------AATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGG 118710
||| || || || || | | | || ||| | | | | ||| | |
Sbjct 2508403 ACTTGTCAAAGTTGTACCAAGCATGCTTACCATCCTGCTCAATAAAAGA---AGGTAAAG 2508459
Query 118711 CGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCG 118770
| || || |||| ||||| |||| ||||| | | || || | ||||||
Sbjct 2508460 CAATCGAAGCCAAGTTACAAACAGCAACTTCATCTGGTGCCGAATATTCAACAATTTCAC 2508519
Query 118771 TGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACG 118830
|||||||| ||| ||||| ||||| || ||||| || ||||| |||||||| |
Sbjct 2508520 AACACAAGTTGGAAGATTTAATAACACCCAAATTTTTTTGGTTGGACTTGGTGTTACAAG 2508579
Query 118831 CATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 118870
|||||||||| | |||| |||| || || ||||| |||||
Sbjct 2508580 CATCCTTGTACAACATGAATGGGGTACCAGTCTCAGTTTG 2508619
Score = 84.2 bits (92), Expect = 3e-11
Identities = 364/564 (65%), Gaps = 29/564 (5%)
Strand=Plus/Minus
Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075
||||| || ||| | ||| || ||||| | || | |||||| || ||| || |||
Sbjct 2634269 GCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCT 2634210
Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135
||||| | || | |||||||||||||||||| | | ||| || ||| ||| |||||
Sbjct 2634209 GGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATA 2634150
Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAA----GGAGCGGGACTTTGTATC 130191
||||| ||| || || |||| | | ||||||||| | | ||| | |||
Sbjct 2634149 CCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTG---- 2634094
Query 130192 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TT 130250
|| ||| | || ||||| | ||||| || | || |||| ||| | || || ||
Sbjct 2634093 AATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATT 2634034
Query 130251 CA--AAGAGTTC--CTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAA 130306
| |||| || |||| || |||||| ||||| || | || || | | ||||
Sbjct 2634033 GAATAAGAAATCGGCTTCCTT-----TGGATCCTTGATATAAGTTTCAATCAATAATGAA 2633979
Query 130307 TATGTTTCGCCATGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTC 130365
|| ||||| ||| | ||| ||| ||| || || | || || || |||||
Sbjct 2633978 TAAGTTTCTGAATGAATGTTTTCCATCATGATTTGGAAAC-CATAAAATGATTTGGCTTC 2633920
Query 130366 GCTTATCTGTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGA 130425
|| || || ||| | | ||| || | | || ||| |||||| ||||| ||
Sbjct 2633919 AGGAATTTGAACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGA 2633860
Query 130426 CCCAGCAAAAAACGCCAGGATATACTT--TATGAATTTCTGTTCATTCTCGTTCAGGGTC 130483
|||| ||||| |||| | || ||| ||||| | |||||| || |||| ||
Sbjct 2633859 GGCAGCGAAAAAGGCCA--AGATTCTTCCAATGAAAAACCTTTCATTGTCATTCAATTTC 2633802
Query 130484 T---TCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA-ATTGCTCAT 130539
| |||| || | |||||| || | ||| | || || |||||||| | || |
Sbjct 2633801 TCTCTCCAATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGAT-GC 2633743
Query 130540 TTGAGCCTTCTTATAGAGTTCCCA 130563
|| ||||||||| || | || |||
Sbjct 2633742 TTCAGCCTTCTTGTACATTTGCCA 2633719
>seq6
Length=960076
Score = 84.2 bits (92), Expect = 3e-11
Identities = 212/320 (66%), Gaps = 2/320 (1%)
Strand=Plus/Plus
Query 14148 TATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCG 14207
||||||| || ||||| ||| ||| | |||||| | ||| | ||| || ||||||||
Sbjct 730965 TATCAAACCCGTCCATTTCAACCAATAATTGATTCAAGGTGTTTTCACGCTCATCATTGC 731024
Query 14208 CAGGCATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGA 14267
|| ||||| ||| || | || ||||| | || ||||| ||||| | |||| ||
Sbjct 731025 CACCCATACGACCATTACCTCTTTCTTTACCAATAGCATCAATCTCATCAACAAAAATGA 731084
Query 14268 TACATGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACAC 14327
| ||| | || | || || || | ||| || || | | ||||| ||||
Sbjct 731085 TTGCTGGGGCCATATCCCTTGCCGTTTTGAATAAATCACGTACACGCGATGCACCAACAC 731144
Query 14328 CCACAAACATCTCCACAAAATTGGCGGCGG-AACATTGGATGAAGGGGACGTTAGATTCA 14386
| ||||||||||| ||||| | | ||| |||| | || || || || | ||||
Sbjct 731145 CAACAAACATCTCAACAAATTCCGATCCGGAAACACT-GAGAAAAGGTACACCTGCTTCA 731203
Query 14387 CCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCA 14446
|| || | ||| || | | |||||| || || || || ||| | | || |||
Sbjct 731204 CCAGCAGTTGCTTTTGCCAACAAGGTCTTACCTGTACCAGGAGGCCCCGACAAAATTGCA 731263
Query 14447 CCACGTGGGATCCTGGCACC 14466
||||| |||||| |||||||
Sbjct 731264 CCACGAGGGATCTTGGCACC 731283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434898512840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |