Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq6 134 2e-26
seq39 132 5e-26
seq15 105 8e-18
>seq6
Length=960076
Score = 134 bits (148), Expect = 2e-26
Identities = 149/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||||||||||||||| || ||||| || || || || ||| | || |||||||||
Sbjct 21802 AATGCAAATCTTTGTCAAAACCCTTACGGGTAAAACCATCACTTTAGAAGTTGAGTCATC 21861
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||| | ||||| ||| | ||| | || || || |||||||| ||||| || ||||| ||
Sbjct 21862 TGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCAGATCA 21921
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| | | || ||||||||||| ||| | || |||| | | || | | ||||| ||
Sbjct 21922 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 21981
Query 27585 TGTCCAAAAGGAATCCACT 27603
||||||||||||| |||
Sbjct 21982 CATCCAAAAGGAATCTACT 22000
>seq39
Length=2831396
Score = 132 bits (146), Expect = 5e-26
Identities = 662/1043 (63%), Gaps = 35/1043 (3%)
Strand=Plus/Plus
Query 80725 TCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCC 80784
||||||| ||| || || || | ||| || || | ||| | | |||| |||| ||| ||
Sbjct 2508270 TCAGCCAAGCCTTGGACACCCAAGGCAATTGGTCTGTGTCTCATGTTTGATCTCTCAGCT 2508329
Query 80785 TCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGT 80844
|| |||| |||||| |||| ||| ||||| | |||| || |||||||||||
Sbjct 2508330 TCAGGAACTGGGTAGTAGTTTCGATCAATGACTCTATTCAAATTACGTGTAACAACTTTG 2508389
Query 80845 GTAACATCATGAAGTTTCTGAAAGTCGAAT------TGGTTCCCCTTC------ACAAAT 80892
|| || ||||| | || | ||||| | | || || || | | | |||
Sbjct 2508390 GTGACGTCATGCAACTTGTCAAAGTTGTACCAAGCATGCTTACCATCCTGCTCAATAAAA 2508449
Query 80893 GCCGG-AAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTC 80951
| || || || | || |||| || || || || || || || | | | | | ||
Sbjct 2508450 GAAGGTAAAGCA-ATCGAAGCCAAGTTACAAACAGCAACTTCATCTGGTGCCGAATATTC 2508508
Query 80952 GACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTT 81011
|| ||||| ||||| || ||||| ||||| ||||| ||||| ||||| |||||
Sbjct 2508509 AACAATTTCACAACACAAGTTGGAAGATTTAATAACACCCAAATTTTTTTGGTTGGACTT 2508568
Query 81012 GGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAG 81071
|| ||| ||||| |||||||| ||||| | |||||||| ||||| |||| || |
Sbjct 2508569 GGTGTTACAAGCATCCTTGTACAACATGAATGGGGTACCAGTCTCAGTTTGTGCCTCCAA 2508628
Query 81072 GATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATA 81131
||||| | ||| | | | || |||| ||| | ||||| | | ||
Sbjct 2508629 GATGGAATACCACAATTTTTGAGCTTTGATTGTCTTTCTACCACGACCTTCTTTCTCGTA 2508688
Query 81132 CTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGT-TCAGTGAGGTCTGGGCACTCGT 81190
|| | || || | || | | |||| | |||| |||| | || ||| || |
Sbjct 2508689 TTTCTCATACAACTCAACAAATTCGTCACCAT-AAGTATCAGCCAAGTTTGGAGCTTCAT 2508747
Query 81191 TAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGA 81250
| || | | || ||| || | | ||| || ||||| || || ||||
Sbjct 2508748 TTGGAGAGAACAATGTCCAATCACCATTTTGCTCAACTCTTTTCATAAACAAATCTGGGA 2508807
Query 81251 TCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCT--CCTCATCACCCTGGTTGAGGCG 81308
|||| | || | ||||| ||| | ||| | | | || | ||| ||||| |
Sbjct 2508808 TCCACAAAGCTGGGAACAAGTCTCT--AGCTCTAATTTCTTCCTTACCATGGTTCTTTCT 2508865
Query 81309 CAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCC 81368
| || | ||||| | ||| || || |||||||| || ||||| | || | | ||
Sbjct 2508866 AATTTCAATGAAGTCAAAGATATCAGCGTGCCATGGTTCAAGATATAAAGCAAAAGCACC 2508925
Query 81369 ------CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAA 81422
|||| || |||| || | || ||||| ||||| ||| || ||||| |
Sbjct 2508926 TGGTCTCTTGTTAC---CACCTTGATCCACATAACGAGCAGTGTTGTTGAAAACACGAAC 2508982
Query 81423 CATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCG 81482
||| || || ||||||| ||| |||||| ||||| |||| | || ||| ||
Sbjct 2508983 CATTGGAATAATACCATTTGAAGTACCGTTGGTACCAGCGATGTAGGCACCAGTGGAACG 2509042
Query 81483 CACCTTGCTGAT-TGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGT 81541
| ||| ||| || || || || ||||| | | ||||||||| ||||| |
Sbjct 2509043 AATGTTGTGGATATGCAAT-CCAATACCACCAGCACTTTTTGAAATCAAGGCACATGTCT 2509101
Query 81542 TCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTG 81601
| | || |||||||| || || || ||||| |||||| ||| ||||||||| ||
Sbjct 2509102 TTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAACAAGATG 2509161
Query 81602 ACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATA 81659
|||| || || |||| ||| ||||||||||||| ||| | | ||| | || ||
Sbjct 2509162 ACATTTGTGG--TTTTGGAGTACCGGCATTGAACAAACATGGAGAACCATGAGTAAAGTA 2509219
Query 81660 ACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACC 81719
| | ||||||| | || || || | || | ||| ||||| || || |||||
Sbjct 2509220 TCTTTGAGACATCAAATTGTAAGTCTCAATAACTCTTGGGATATCTCTTCCATGGATACC 2509279
Query 81720 GATAGCTACACGCATAAACATGT 81742
||||| || | ||||| || ||
Sbjct 2509280 AATAGCAACTCTCATAATCAAGT 2509302
>seq15
Length=2091020
Score = 105 bits (116), Expect = 8e-18
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| || ||||| || | ||||| ||||| || || | ||||||||||||
Sbjct 2075698 AATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAGTCATC 2075639
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | |||| ||| | || | || || || ||||| || || ||||| ||||| ||
Sbjct 2075638 AGACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCA 2075579
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| | | |||||||||||||| ||| | || |||| | | || | | ||||| ||
Sbjct 2075578 ACAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 2075519
Query 27585 TGTCCAAAAGGAATCCAC 27602
| ||||| ||||||||
Sbjct 2075518 CATTCAAAAAGAATCCAC 2075501
Score = 98.7 bits (108), Expect = 1e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || ||||| || | ||||| ||||| || || | |||||||| |||
Sbjct 2075013 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2074954
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | || | || || || ||||| || || ||||| ||||| ||
Sbjct 2074953 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2074894
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | |||||||||||||| ||| | || |||| | | || | | ||||| ||
Sbjct 2074893 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2074834
Query 27586 GTCCAAAAGGAATCCAC 27602
| ||||| ||||||||
Sbjct 2074833 ATTCAAAAAGAATCCAC 2074817
Score = 98.7 bits (108), Expect = 1e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || ||||| || | ||||| ||||| || || | |||||||| |||
Sbjct 2075241 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075182
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | || | || || || ||||| || || ||||| ||||| ||
Sbjct 2075181 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075122
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | |||||||||||||| ||| | || |||| | | || | | ||||| ||
Sbjct 2075121 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075062
Query 27586 GTCCAAAAGGAATCCAC 27602
| ||||| ||||||||
Sbjct 2075061 ATTCAAAAAGAATCCAC 2075045
Score = 98.7 bits (108), Expect = 1e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || ||||| || | ||||| ||||| || || | |||||||| |||
Sbjct 2075469 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075410
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | || | || || || ||||| || || ||||| ||||| ||
Sbjct 2075409 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075350
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | |||||||||||||| ||| | || |||| | | || | | ||||| ||
Sbjct 2075349 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075290
Query 27586 GTCCAAAAGGAATCCAC 27602
| ||||| ||||||||
Sbjct 2075289 ATTCAAAAAGAATCCAC 2075273
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310121973680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |