Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq6 134 2e-26 seq39 132 5e-26 seq15 105 8e-18 >seq6 Length=960076 Score = 134 bits (148), Expect = 2e-26 Identities = 149/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||||||||||||||| || ||||| || || || || ||| | || ||||||||| Sbjct 21802 AATGCAAATCTTTGTCAAAACCCTTACGGGTAAAACCATCACTTTAGAAGTTGAGTCATC 21861 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | ||||| ||| | ||| | || || || |||||||| ||||| || ||||| || Sbjct 21862 TGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCAGATCA 21921 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || | | || ||||||||||| ||| | || |||| | | || | | ||||| || Sbjct 21922 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 21981 Query 27585 TGTCCAAAAGGAATCCACT 27603 ||||||||||||| ||| Sbjct 21982 CATCCAAAAGGAATCTACT 22000 >seq39 Length=2831396 Score = 132 bits (146), Expect = 5e-26 Identities = 662/1043 (63%), Gaps = 35/1043 (3%) Strand=Plus/Plus Query 80725 TCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCC 80784 ||||||| ||| || || || | ||| || || | ||| | | |||| |||| ||| || Sbjct 2508270 TCAGCCAAGCCTTGGACACCCAAGGCAATTGGTCTGTGTCTCATGTTTGATCTCTCAGCT 2508329 Query 80785 TCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGT 80844 || |||| |||||| |||| ||| ||||| | |||| || ||||||||||| Sbjct 2508330 TCAGGAACTGGGTAGTAGTTTCGATCAATGACTCTATTCAAATTACGTGTAACAACTTTG 2508389 Query 80845 GTAACATCATGAAGTTTCTGAAAGTCGAAT------TGGTTCCCCTTC------ACAAAT 80892 || || ||||| | || | ||||| | | || || || | | | ||| Sbjct 2508390 GTGACGTCATGCAACTTGTCAAAGTTGTACCAAGCATGCTTACCATCCTGCTCAATAAAA 2508449 Query 80893 GCCGG-AAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTC 80951 | || || || | || |||| || || || || || || || | | | | | || Sbjct 2508450 GAAGGTAAAGCA-ATCGAAGCCAAGTTACAAACAGCAACTTCATCTGGTGCCGAATATTC 2508508 Query 80952 GACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTT 81011 || ||||| ||||| || ||||| ||||| ||||| ||||| ||||| ||||| Sbjct 2508509 AACAATTTCACAACACAAGTTGGAAGATTTAATAACACCCAAATTTTTTTGGTTGGACTT 2508568 Query 81012 GGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAG 81071 || ||| ||||| |||||||| ||||| | |||||||| ||||| |||| || | Sbjct 2508569 GGTGTTACAAGCATCCTTGTACAACATGAATGGGGTACCAGTCTCAGTTTGTGCCTCCAA 2508628 Query 81072 GATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATA 81131 ||||| | ||| | | | || |||| ||| | ||||| | | || Sbjct 2508629 GATGGAATACCACAATTTTTGAGCTTTGATTGTCTTTCTACCACGACCTTCTTTCTCGTA 2508688 Query 81132 CTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGT-TCAGTGAGGTCTGGGCACTCGT 81190 || | || || | || | | |||| | |||| |||| | || ||| || | Sbjct 2508689 TTTCTCATACAACTCAACAAATTCGTCACCAT-AAGTATCAGCCAAGTTTGGAGCTTCAT 2508747 Query 81191 TAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGA 81250 | || | | || ||| || | | ||| || ||||| || || |||| Sbjct 2508748 TTGGAGAGAACAATGTCCAATCACCATTTTGCTCAACTCTTTTCATAAACAAATCTGGGA 2508807 Query 81251 TCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCT--CCTCATCACCCTGGTTGAGGCG 81308 |||| | || | ||||| ||| | ||| | | | || | ||| ||||| | Sbjct 2508808 TCCACAAAGCTGGGAACAAGTCTCT--AGCTCTAATTTCTTCCTTACCATGGTTCTTTCT 2508865 Query 81309 CAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCC 81368 | || | ||||| | ||| || || |||||||| || ||||| | || | | || Sbjct 2508866 AATTTCAATGAAGTCAAAGATATCAGCGTGCCATGGTTCAAGATATAAAGCAAAAGCACC 2508925 Query 81369 ------CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAA 81422 |||| || |||| || | || ||||| ||||| ||| || ||||| | Sbjct 2508926 TGGTCTCTTGTTAC---CACCTTGATCCACATAACGAGCAGTGTTGTTGAAAACACGAAC 2508982 Query 81423 CATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCG 81482 ||| || || ||||||| ||| |||||| ||||| |||| | || ||| || Sbjct 2508983 CATTGGAATAATACCATTTGAAGTACCGTTGGTACCAGCGATGTAGGCACCAGTGGAACG 2509042 Query 81483 CACCTTGCTGAT-TGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGT 81541 | ||| ||| || || || || ||||| | | ||||||||| ||||| | Sbjct 2509043 AATGTTGTGGATATGCAAT-CCAATACCACCAGCACTTTTTGAAATCAAGGCACATGTCT 2509101 Query 81542 TCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTG 81601 | | || |||||||| || || || ||||| |||||| ||| ||||||||| || Sbjct 2509102 TTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAACAAGATG 2509161 Query 81602 ACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATA 81659 |||| || || |||| ||| ||||||||||||| ||| | | ||| | || || Sbjct 2509162 ACATTTGTGG--TTTTGGAGTACCGGCATTGAACAAACATGGAGAACCATGAGTAAAGTA 2509219 Query 81660 ACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACC 81719 | | ||||||| | || || || | || | ||| ||||| || || ||||| Sbjct 2509220 TCTTTGAGACATCAAATTGTAAGTCTCAATAACTCTTGGGATATCTCTTCCATGGATACC 2509279 Query 81720 GATAGCTACACGCATAAACATGT 81742 ||||| || | ||||| || || Sbjct 2509280 AATAGCAACTCTCATAATCAAGT 2509302 >seq15 Length=2091020 Score = 105 bits (116), Expect = 8e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| || ||||| || | ||||| ||||| || || | |||||||||||| Sbjct 2075698 AATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAGTCATC 2075639 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| ||| | || | || || || ||||| || || ||||| ||||| || Sbjct 2075638 AGACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCA 2075579 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || | | |||||||||||||| ||| | || |||| | | || | | ||||| || Sbjct 2075578 ACAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 2075519 Query 27585 TGTCCAAAAGGAATCCAC 27602 | ||||| |||||||| Sbjct 2075518 CATTCAAAAAGAATCCAC 2075501 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || ||||| || | ||||| ||||| || || | |||||||| ||| Sbjct 2075013 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2074954 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | || | || || || ||||| || || ||||| ||||| || Sbjct 2074953 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2074894 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | |||||||||||||| ||| | || |||| | | || | | ||||| || Sbjct 2074893 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2074834 Query 27586 GTCCAAAAGGAATCCAC 27602 | ||||| |||||||| Sbjct 2074833 ATTCAAAAAGAATCCAC 2074817 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || ||||| || | ||||| ||||| || || | |||||||| ||| Sbjct 2075241 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075182 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | || | || || || ||||| || || ||||| ||||| || Sbjct 2075181 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075122 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | |||||||||||||| ||| | || |||| | | || | | ||||| || Sbjct 2075121 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075062 Query 27586 GTCCAAAAGGAATCCAC 27602 | ||||| |||||||| Sbjct 2075061 ATTCAAAAAGAATCCAC 2075045 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || ||||| || | ||||| ||||| || || | |||||||| ||| Sbjct 2075469 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075410 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | || | || || || ||||| || || ||||| ||||| || Sbjct 2075409 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075350 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | |||||||||||||| ||| | || |||| | | || | | ||||| || Sbjct 2075349 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075290 Query 27586 GTCCAAAAGGAATCCAC 27602 | ||||| |||||||| Sbjct 2075289 ATTCAAAAAGAATCCAC 2075273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310121973680