Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq15 98.7 6e-16 >seq15 Length=2091020 Score = 98.7 bits (108), Expect = 6e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | ||||||||| || | ||| || ||||||||||| || || || Sbjct 2075471 CCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 2075530 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | |||| | ||||| | ||||||||| ||||| || || | ||||| || || || Sbjct 2075531 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 2075590 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || || |||||| |||| || | ||| || | ||| |||||| ||| || Sbjct 2075591 ATACCTTCTTTGTCTTGGATC-TTGGATTTGACATTGTCAATAGTGTCTGATGACTCAAC 2075649 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | ||| || || |||||||| || ||||| || ||||| ||||| Sbjct 2075650 CTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2075697 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | ||||||||| || | ||| || ||||||||||| || || || Sbjct 2074787 CCACCTCTCAATCTCAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 2074846 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | |||| | ||||| | ||||||||| ||||| || || | ||||| || || || Sbjct 2074847 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 2074906 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || || |||||| |||| || | ||| || | ||| |||||| || || Sbjct 2074907 ATACCTTCTTTGTCTTGGATC-TTGGATTTGACATTGTCAATAGTGTCTGATGATTCAAC 2074965 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | ||| || || |||||||| || ||||| || ||||| ||||| Sbjct 2074966 CTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2075013 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | ||||||||| || | ||| || ||||||||||| || || || Sbjct 2075015 CCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 2075074 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | |||| | ||||| | ||||||||| ||||| || || | ||||| || || || Sbjct 2075075 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 2075134 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || || |||||| |||| || | ||| || | ||| |||||| || || Sbjct 2075135 ATACCTTCTTTGTCTTGGATC-TTGGATTTGACATTGTCAATAGTGTCTGATGATTCAAC 2075193 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | ||| || || |||||||| || ||||| || ||||| ||||| Sbjct 2075194 CTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2075241 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | ||||||||| || | ||| || ||||||||||| || || || Sbjct 2075243 CCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 2075302 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | |||| | ||||| | ||||||||| ||||| || || | ||||| || || || Sbjct 2075303 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 2075362 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || || |||||| |||| || | ||| || | ||| |||||| || || Sbjct 2075363 ATACCTTCTTTGTCTTGGATC-TTGGATTTGACATTGTCAATAGTGTCTGATGATTCAAC 2075421 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | ||| || || |||||||| || ||||| || ||||| ||||| Sbjct 2075422 CTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2075469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729450405087