Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq15 143 2e-29 seq6 131 1e-25 >seq15 Length=2091020 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| ||||||| ||| | || || | || || ||| | || Sbjct 2075013 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2074954 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | |||||| || || |||||||||||||| || ||||| |||||| Sbjct 2074953 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2074894 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || |||||||||||||| || || | ||||| |||||| Sbjct 2074893 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2074834 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||||||| || || || ||||| ||||| ||| | ||| | ||||| Sbjct 2074833 ATTCAAAAAGAATCCACATTACACTTGGTGTTGAGATTGAGAGGTGG 2074787 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| ||||||| ||| | || || | || || ||| | || Sbjct 2075241 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075182 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | |||||| || || |||||||||||||| || ||||| |||||| Sbjct 2075181 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075122 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || |||||||||||||| || || | ||||| |||||| Sbjct 2075121 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075062 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| || || || || || ||||| ||| | ||| | ||||| || Sbjct 2075061 ATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGGTAT 2075012 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| ||||||| ||| | || || | || || ||| | || Sbjct 2075469 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075410 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | |||||| || || |||||||||||||| || ||||| |||||| Sbjct 2075409 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075350 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || |||||||||||||| || || | ||||| |||||| Sbjct 2075349 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075290 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| || || || || || ||||| ||| | ||| | ||||| || Sbjct 2075289 ATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGGTAT 2075240 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| ||||||| ||| | || || | || || || | || Sbjct 2075697 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAGTCATCA 2075638 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | |||||| || || |||||||||||||| || ||||| |||||| Sbjct 2075637 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075578 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || |||||||||||||| || || | ||||| |||||| Sbjct 2075577 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075518 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| || || || || || ||||| ||| | ||| | ||||| || Sbjct 2075517 ATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGGTAT 2075468 >seq6 Length=960076 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| || || || || | || ||| | ||||| || | || Sbjct 21803 ATGCAAATCTTTGTCAAAACCCTTACGGGTAAAACCATCACTTTAGAAGTTGAGTCATCT 21862 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || |||||||| ||||| || ||||| |||||| Sbjct 21863 GACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCAGATCAA 21922 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || |||||||||||||| || || | ||||| |||||| Sbjct 21923 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 21982 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || |||||||| || || || || ||||| ||| | ||| | ||||| Sbjct 21983 ATCCAAAAGGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 22029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918187977280