Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq39 271 7e-68 >seq39 Length=2831396 Score = 271 bits (300), Expect = 7e-68 Identities = 605/897 (67%), Gaps = 27/897 (3%) Strand=Plus/Minus Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307 |||||| |||||||| || || |||| ||||| |||||||| || || || | || Sbjct 2634572 ACACCAGCCTTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAG 2634513 Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAA---TGTTTTTCACACTTT 4364 || ||||| |||||||||||||| ||||| || | |||||| | ||| | || | Sbjct 2634512 GAGATATTCTCCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTTTGTTACCC--- 2634456 Query 4365 AGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTA 4424 | ||| || | |||| ||| || |||||||| | ||| || | ||| | | || || Sbjct 2634455 AAAGCAACCAATAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTC 2634396 Query 4425 ATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCT 4484 ||||| | || || || || | || | || || || |||| ||| || || ||| Sbjct 2634395 ATTCCCAACAAACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCT 2634336 Query 4485 TCTGTGATTATATCTTTTATTTTATCTTTAGAT--GGTTTATTTACTAAGTATCCAAACA 4542 || || || || ||||| | |||||| | | ||| ||| | ||| | |||||| Sbjct 2634335 TCAGTAATAAT-TCTTTCA-ACAATCTTTGGGTCAGGTCTATGTTGTAAATGAGCAAACA 2634278 Query 4543 ATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACG 4602 | || || ||||||||| || |||||||| || | | ||||| ||| || ||||| | Sbjct 2634277 ACAAGCATGCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGG 2634218 Query 4603 TTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAA 4662 | ||||| |||||||| |||||||| || | ||| || || | ||||| || ||| | Sbjct 2634217 TCAATCCTGGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGA 2634158 Query 4663 AGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTG- 4721 | || || || || || || ||||| || || |||| | ||| | || | | Sbjct 2634157 AAAAGATACCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAA--TGCATCGGA 2634100 Query 4722 -TCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATAT 4780 |||| ||||||| | | ||||| | ||| || || |||| || || || | || Sbjct 2634099 ATCTTGAATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAAT 2634040 Query 4781 AGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCT 4840 ||| || ||||| | ||| ||| || | |||||||| || || | || Sbjct 2634039 AGCATTGAATAAGAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGA 2633980 Query 4841 ATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTC 4900 ||| |||| ||||| || ||||| || || || || || ||||| || | ||||| Sbjct 2633979 ATAAGTTTCTGAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTC 2633920 Query 4901 TGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACT 4960 | | ||||||||| | |||| |||| || |||||||| || || ||||| ||| Sbjct 2633919 AGGAATTTGAACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGA 2633860 Query 4961 GGCTGCAAAAAACGCCAAAA--CATGAGATATAAAGTACTGTTC---GTCAGGCTTAAGT 5015 ||| || ||||| ||||| | | | || ||| || ||| |||| || | | Sbjct 2633859 GGCAGCGAAAAAGGCCAAGATTCTTCCAATGAAAA--ACCTTTCATTGTCA---TTCAAT 2633805 Query 5016 TT---TTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGAC 5072 || | |||| | | | ||||||| |||||||| |||||| ||||||| || || Sbjct 2633804 TTCTCTCTCCAATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGAT 2633745 Query 5073 GCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACA 5129 ||||| || || |||||||| |||||| ||| | || ||| |||| |||||| Sbjct 2633744 GCTTCAGCCTTCTTGTACATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACA 2633688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049397017987