Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq39 271 7e-68
>seq39
Length=2831396
Score = 271 bits (300), Expect = 7e-68
Identities = 605/897 (67%), Gaps = 27/897 (3%)
Strand=Plus/Minus
Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307
|||||| |||||||| || || |||| ||||| |||||||| || || || | ||
Sbjct 2634572 ACACCAGCCTTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAG 2634513
Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAA---TGTTTTTCACACTTT 4364
|| ||||| |||||||||||||| ||||| || | |||||| | ||| | || |
Sbjct 2634512 GAGATATTCTCCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTTTGTTACCC--- 2634456
Query 4365 AGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTA 4424
| ||| || | |||| ||| || |||||||| | ||| || | ||| | | || ||
Sbjct 2634455 AAAGCAACCAATAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTC 2634396
Query 4425 ATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCT 4484
||||| | || || || || | || | || || || |||| ||| || || |||
Sbjct 2634395 ATTCCCAACAAACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCT 2634336
Query 4485 TCTGTGATTATATCTTTTATTTTATCTTTAGAT--GGTTTATTTACTAAGTATCCAAACA 4542
|| || || || ||||| | |||||| | | ||| ||| | ||| | ||||||
Sbjct 2634335 TCAGTAATAAT-TCTTTCA-ACAATCTTTGGGTCAGGTCTATGTTGTAAATGAGCAAACA 2634278
Query 4543 ATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACG 4602
| || || ||||||||| || |||||||| || | | ||||| ||| || ||||| |
Sbjct 2634277 ACAAGCATGCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGG 2634218
Query 4603 TTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAA 4662
| ||||| |||||||| |||||||| || | ||| || || | ||||| || ||| |
Sbjct 2634217 TCAATCCTGGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGA 2634158
Query 4663 AGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTG- 4721
| || || || || || || ||||| || || |||| | ||| | || | |
Sbjct 2634157 AAAAGATACCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAA--TGCATCGGA 2634100
Query 4722 -TCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATAT 4780
|||| ||||||| | | ||||| | ||| || || |||| || || || | ||
Sbjct 2634099 ATCTTGAATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAAT 2634040
Query 4781 AGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCT 4840
||| || ||||| | ||| ||| || | |||||||| || || | ||
Sbjct 2634039 AGCATTGAATAAGAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGA 2633980
Query 4841 ATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTC 4900
||| |||| ||||| || ||||| || || || || || ||||| || | |||||
Sbjct 2633979 ATAAGTTTCTGAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTC 2633920
Query 4901 TGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACT 4960
| | ||||||||| | |||| |||| || |||||||| || || ||||| |||
Sbjct 2633919 AGGAATTTGAACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGA 2633860
Query 4961 GGCTGCAAAAAACGCCAAAA--CATGAGATATAAAGTACTGTTC---GTCAGGCTTAAGT 5015
||| || ||||| ||||| | | | || ||| || ||| |||| || | |
Sbjct 2633859 GGCAGCGAAAAAGGCCAAGATTCTTCCAATGAAAA--ACCTTTCATTGTCA---TTCAAT 2633805
Query 5016 TT---TTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGAC 5072
|| | |||| | | | ||||||| |||||||| |||||| ||||||| || ||
Sbjct 2633804 TTCTCTCTCCAATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGAT 2633745
Query 5073 GCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACA 5129
||||| || || |||||||| |||||| ||| | || ||| |||| ||||||
Sbjct 2633744 GCTTCAGCCTTCTTGTACATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACA 2633688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049397017987
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |