Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq39 426 2e-114 >seq39 Length=2831396 Score = 426 bits (472), Expect = 2e-114 Identities = 1459/2246 (65%), Gaps = 51/2246 (2%) Strand=Plus/Plus Query 76773 TTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCA 76832 ||||| | || ||||| || | || ||| || | || || | | ||||||||||| Sbjct 2507538 TTATCAATGGTGAACTGGATAGCAGCAGAAGCAGCTTGCGTCCTCAAGTAGTACATACCT 2507597 Query 76833 GTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGA 76892 || |||| || ||||||| || || ||||||||||||| ||| | ||| Sbjct 2507598 GTCTTTAATCCTTTCTTCCATCCATAAAAGTGCATGCTTGTCAATTTACCCATGGTTGGA 2507657 Query 76893 TCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCC 76952 || || ||||| || | || || ||| |||||||| || ||||||||| ||| Sbjct 2507658 TCTTTGATGTGAATGTTTAATGATTGTGATTGGTCGATGAATGCAGCTCTATCAGAAGCC 2507717 Query 76953 ATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCA 77012 || | |||||| |||||| | |||||||||| ||||||| | | | ||||| || Sbjct 2507718 ATATCAATAATGTGCTTTTGCGAGATTTCCCAAACAGTTTTGTACAATGCCTTGATTTCG 2507777 Query 77013 TCTGGAAGGTTTGT---ATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATA 77069 ||||||| ||||| | ||||||||||||| | ||| ||||| || |||| ||| Sbjct 2507778 TCTGGAATGTTTGGCAAAGCTTGAATGGAACCATTGTTTGAAATAATGCTACTCTTCATA 2507837 Query 77070 TCATCATTCCACAATTTCCTC--TCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTT 77127 | |||||||| | ||||| || ||| || | | | | |||||||| |||| Sbjct 2507838 GCGTCATTCCAAA--TTCCTAAATCAACCAAATCTTTCAACAAGTATGGATTAACAATTT 2507895 Query 77128 GAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATT 77187 |||| || |||| ||| ||||| | || ||||||||| || ||||| || | | ||| Sbjct 2507896 GAAACTCACCAGCCAACACTCTTCTAGAGTAAATATTTGAAGTGTATGGCTCGAAACATT 2507955 Query 77188 CATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTAT 77247 ||||||| ||||||||||| | ||||||||||| ||||| || |||||||| || | Sbjct 2507956 CATTGTTACCCAAAATTTGTGATGTAGAAGCAGTAGGCATTGGAGCCACCAACAAGGAGT 2508015 Query 77248 TTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAG 77307 |||| | ||| ||| | | || ||||| | | | ||||||||| | || | | Sbjct 2508016 TTCTCATACCGTGTTTGGCAAGCTTTTCTTTCAATTCATCCCAATCCCACAATTCAGTTG 2508075 Query 77308 GTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTA-GCATATGATCCATTATAT 77366 | | ||| | |||||||| | | || || | | || ||| || | || Sbjct 2508076 GCTTTCTGTTCCACAAGTCGTATTGCAACAAACC-TTGCGATGCTGGTGAGCCTTGGTAA 2508134 Query 77367 GTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAA 77426 |||||||| || |||||| | |||| |||| ||||| | || | | ||| Sbjct 2508135 GTTTCATAGGGACCTTCTTCCGCCGCTAATTCAATTGATGCTTCAACAGCAGCATGATAG 2508194 Query 77427 ATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAA-CGGATAATG 77485 |||||||| ||||| | |||| | || ||||| |||||| | ||| | Sbjct 2508195 ATTGTTTCAAAAATTTGAATATTCAATTCCCTAGCTTCTTGGGAATCAAATCCGATTCT- 2508253 Query 77486 TAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTT 77545 |||| ||||| ||||| || || || || || || | |||| ||||| |||||| | Sbjct 2508254 CAAAACCATAAATGCATCAGCCAAGCCTTGGACACCCAAGGCAATTGGTCTGTGTCTCAT 2508313 Query 77546 ATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATT 77605 || || | | |||||| |||| || || || || || || | | |||| | ||| Sbjct 2508314 GTTTGATCTCTCAGCTTCAGGAACTGGGTAGTAGTTTCGATCAATGACTCTATTCAAATT 2508373 Query 77606 TCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAA-----ATCAA--AT-CTT-CC 77656 | ||| ||||| ||||| | | || ||| | ||| || ||| || Sbjct 2508374 ACGTGTAACAACTTTGGTGACGTCATGCAACTTGTCAAAGTTGTACCAAGCATGCTTACC 2508433 Query 77657 AT----CTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCAT 77712 || || | ||| | | | ||||| || || || | |||||||| || || |||| Sbjct 2508434 ATCCTGCTCAATAAAAGAAGGT-AAAGCAATCGAAGCCAAGTTACAAACAGCAACTTCAT 2508492 Query 77713 TAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGAT 77772 | | ||||| | || || ||| | || | |||| ||| |||| || Sbjct 2508493 CTGGTGCCGAATATTCAACAATTTCACAACACAAGTTGGAAGATTTAATAACACCCAAAT 2508552 Query 77773 TTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTT 77832 ||| ||||||| ||| | || || | ||||| || | || || || || || || | Sbjct 2508553 TTTTTTGGTTGGACTTGGTGTTACAAGCATCCTTGTACAACATGAATGGGGTACCAGTCT 2508612 Query 77833 CAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTTGTA-- 77890 || | |||| || | || || | ||| | | |||||| || | ||| || Sbjct 2508613 CAGTTTGTGCCTCCAAGATGGAATACCACAATTTTTGAGCTTTGAT--TGTCTTTCTACC 2508670 Query 77891 TCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATC 77950 || | ||| | || |||| ||| | | ||||||| || || || |||| | Sbjct 2508671 ACGACCTTCTTTCTCGTATTTCTCATACAACTCAACAAATTCGTCACCATAAGTATCAGC 2508730 Query 77951 CAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTT 78010 ||| || ||||||||| | | ||||| ||| ||||||| || || ||||| ||| Sbjct 2508731 CAAGTTTGGAGCTTCATTTGGAGAGAACAATGTCCAATCACCATTTTGCTCAACTCTTTT 2508790 Query 78011 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATT 78070 |||||| | ||| || ||||| | ||| || | |||| | |||| |||||| || Sbjct 2508791 CATAAACAAATCTGGGATCCACAAAGCTGGGAACAAGTCTCTAGCTCTAATTTCTTCCTT 2508850 Query 78071 TCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATA 78130 || |||||| ||| || | || || | ||||||| ||||||||||| ||||| Sbjct 2508851 ACCATGGTTCTTTCTAATTTCAATGAAGTCAAAGATATCAGCGTGCCATGGTTCAAGATA 2508910 Query 78131 TATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATT 78190 || || | | | || |||| || ||||| || ||||| | ||| | || ||||| || Sbjct 2508911 TAAAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCCACATAACGAGCAGTGTTGTT 2508970 Query 78191 ATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACT 78250 |||| | | ||||||||||||||| || || || || || || |||| || || Sbjct 2508971 GAAAACACGAACCATTGGAATAATACCATTTGAAGTACCGTTGGTACCAGCGATGTAGGC 2509030 Query 78251 TCCACTTGCGCGAATATTACTAATGGATAT----CCCTATTCCTCCTGCCATCTTAGATA 78306 ||| | | ||||| || ||||||| || || || || || | || || | Sbjct 2509031 ACCAGTGGAACGAATGTT----GTGGATATGCAATCCAATACCACCAGCACTTTTTGAAA 2509086 Query 78307 TTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCA-TGTTA 78365 | | || || || || || || || ||||| || ||| || || ||| || | Sbjct 2509087 TCAAGGCACATGTCTTTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAA 2509146 Query 78366 AGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGAT 78425 |||||| || | |||||||| | | ||| || ||||| || || ||||| Sbjct 2509147 CCAAGAAACAAGAT-GACATTTGTGGTTTTGGAGTACCGGCATTGAACAAACATGGAGAA 2509205 Query 78426 GCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCC 78485 |||| ||||| || ||| ||| | | |||||| || |||||| || | || || Sbjct 2509206 CCATGAGTAAAGTATCTTTGAGACATCAAATTGTAAGTCTCAATAACTCTTGGGATATCT 2509265 Query 78486 CATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTA 78545 | | ||| || || | || || | ||| | || || || ||||||||| | || Sbjct 2509266 CTTCCATGGATACCAATAGCAACTCTCATAATCAAGTGTTGTGGTCTTTCAGCAACTTTT 2509325 Query 78546 TTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TG 78603 ||| || ||||| |||||| | ||||||||||| || ||||| || ||||| || Sbjct 2509326 CCATTAATACGTAACAAATATGATCTCTCCAAAGTTTTGAATCCAAAGTAATTGTAGTTG 2509385 Query 78604 AAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGT--AACAAT 78661 ||| || | || |||| ||| | || |||| | ||| | |||| | || ||| Sbjct 2509386 AAA--TCACGGTCATAAACAATTGCTGAGTTTAACTCATC--AGCATTTTCTTGAATAAT 2509441 Query 78662 ATCCATGACAGT-AGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGT 78720 | ||| | | ||||||| ||||| | | | | ||| || || | || | Sbjct 2509442 GT-CATAAGTTTCCTTTGAAATCATAGGCGCGTGAAGATTCGTTTCTGGGTTGATGTACT 2509500 Query 78721 TAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATA 78780 | || |||| || | | | | ||| | |||| || || | ||||||| Sbjct 2509501 CGTACAAGTCTTTTGAAACTTGGGAATACAATTTGATGGTTTGTTTATGCAAGTTAGATA 2509560 Query 78781 CAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTA 78840 | || ||||||||||||| || ||||| || ||||| || || ||| || || Sbjct 2509561 CCGCGATTCTTGCAGCTAAAACCGCATAGTCTGGATGAATGGTGGTCATAGTTGCAGCAG 2509620 Query 78841 TTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAA 78900 |||| || || ||| | |||||||| |||||||| ||||| | |||| || ||| | Sbjct 2509621 TTTCAGCAGCCAAATTGTCTAACTCAATAGTTGTAACCCCCTGGTATACACCAGCAATGA 2509680 Query 78901 CTTTCATGGCGATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAACATAAT-TTT 78959 |||| || || ||||| || || | | || || ||||| |||||| ||| Sbjct 2509681 CTTTTTGGGTAATAGCAACAGGTTCAACGTGATTTGAGTCTAACCCATAGCATAATCTTT 2509740 Query 78960 CTAATACGAGATGTGATTTTATCAAA 78985 || | | || ||||||||| ||||| Sbjct 2509741 GTACT-CTAGCTGTGATTTTGTCAAA 2509765 Score = 215 bits (238), Expect = 7e-51 Identities = 579/880 (66%), Gaps = 14/880 (2%) Strand=Plus/Minus Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909 ||||| || ||| || | ||| || || ||||| || || || |||| || ||||| Sbjct 2634563 TTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTC 2634504 Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATC 47969 |||||||||||||||||||| |||| |||| |||||| || || | | Sbjct 2634503 TCCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTTTGTTACCCAAAGCAACCAAT 2634444 Query 47970 AGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGT 48029 | ||| || ||||| ||||| | |||| ||||| | |||||||||||| | | Sbjct 2634443 AATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAACAAA 2634384 Query 48030 TTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATC 48089 ||||||| | || || |||| || |||| ||| || || || || || || Sbjct 2634383 CTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATAATT 2634324 Query 48090 GATGTTAC---CGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCA 48146 | || | || ||| ||| || ||||| ||||| || |||||| Sbjct 2634323 CTTTCAACAATCTTTGGGTCA---GGTCTATGTTGTAAATGAGCAAACAACAAGCATGCA 2634267 Query 48147 AAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGC 48206 |||||| || | ||||||||| | || ||| ||||| || ||||| || | || ||| Sbjct 2634266 AAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCTGGC 2634207 Query 48207 ATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCT 48266 |||| ||| | || || | ||| || || | || || |||||| || || || || Sbjct 2634206 ATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATACCC 2634147 Query 48267 TCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCG---TTGTGTATCCAC 48323 || || || ||||| || | |||||| | | || ||| | || ||||| Sbjct 2634146 TCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTGAATCCAT 2634087 Query 48324 C-GTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 48382 | | || ||||||||||||||||| || | ||| || ||||| |||||||| || | Sbjct 2634086 CTGATG-GCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAATAA 2634028 Query 48383 AAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGA 48442 || | ||| || ||| || | ||||| || || || | ||| |||| || Sbjct 2634027 GAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAGTTTCTGA 2633968 Query 48443 GTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTAC 48502 ||||| ||||| || || || || || ||||| || | ||||| | || || || Sbjct 2633967 ATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTGAAC 2633908 Query 48503 CTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAA 48562 || | | |||| ||| |||| || ||||| || || |||||| ||||| ||||| Sbjct 2633907 TTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAAAAA 2633848 Query 48563 TGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTAT---TCCAGTCATT 48619 || || | | ||| ||| | |||| ||| | ||| ||| | |||| |||| Sbjct 2633847 GGCCAAGATTCTTCCAATGAAAAACCTTTCATTGTCATTCAATTTCTCTCTCCAATCATG 2633788 Query 48620 GATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATA 48679 | |||||| || ||| | |||||| || ||||| |||||||| || || || || || Sbjct 2633787 AAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTTCTTGTA 2633728 Query 48680 CATATTCCATATATCACTGTATTGGATTGGGAAAATAACA 48719 ||| | ||| || ||| |||| || || || || ||| Sbjct 2633727 CATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACA 2633688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668461348960