Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq15 134 1e-26 seq6 93.3 4e-14 >seq15 Length=2091020 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||||||||| |||||||| |||||||| || ||||| ||| | || ||| | Sbjct 2075013 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2074954 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || || ||| | | || ||| || || ||||||||||| |||| |||||| Sbjct 2074953 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2074894 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||| | |||| ||| || ||||||||||||||| || |||| || |||| || || Sbjct 2074893 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2074834 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || ||||||||||| ||| |||| || |||||| | || | ||||| Sbjct 2074833 ATTCAAAAAGAATCCACATTACACTTGGTGTTGAGATTGAGAGGTGG 2074787 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||||||||| |||||||| |||||||| || ||||| ||| | || ||| | Sbjct 2075241 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075182 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || || ||| | | || ||| || || ||||||||||| |||| |||||| Sbjct 2075181 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075122 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||| | |||| ||| || ||||||||||||||| || |||| || |||| || || Sbjct 2075121 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075062 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || ||||||||||| ||| | || || |||||| | || | ||||| Sbjct 2075061 ATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGG 2075015 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||||||||| |||||||| |||||||| || ||||| ||| | || ||| | Sbjct 2075469 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075410 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || || ||| | | || ||| || || ||||||||||| |||| |||||| Sbjct 2075409 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075350 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||| | |||| ||| || ||||||||||||||| || |||| || |||| || || Sbjct 2075349 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075290 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || ||||||||||| ||| | || || |||||| | || | ||||| Sbjct 2075289 ATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGG 2075243 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||||||||| |||||||| |||||||| || ||||| ||| | || || | Sbjct 2075698 AATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAGTCATC 2075639 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 || || ||| | | || ||| || || ||||||||||| |||| ||||| Sbjct 2075638 AGACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCA 2075579 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 |||||| | |||| ||| || ||||||||||||||| || |||| || |||| || || Sbjct 2075578 ACAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 2075519 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || ||||||||||| ||| | || || |||||| | || | ||||| Sbjct 2075518 CATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGG 2075471 >seq6 Length=960076 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 111096 AAAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACC 111155 || ||||||||| ||||||||||| | || || |||||||| || | ||| || | Sbjct 21799 AAGAATGCAAATCTTTGTCAAAACCCTTACGGGTAAAACCATCACTTTAGAAGTTGAGTC 21858 Query 111156 CAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGA 111215 || | ||| | | || || || || ||||| ||||| | || || Sbjct 21859 ATCTGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCAGA 21918 Query 111216 TCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 111275 ||||||||| | || | ||| || ||||||||||||||| || |||| || |||| || Sbjct 21919 TCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTA 21978 Query 111276 TAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || ||||| |||||||| | || || |||||| | || | ||||| Sbjct 21979 CAACATCCAAAAGGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 22029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421810999507864