Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq15 147 5e-30
seq6 123 5e-23
>seq15
Length=2091020
Score = 147 bits (162), Expect = 5e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| ||||| ||| ||||||||| ||||||||||| | | || | ||||| ||
Sbjct 2074805 ACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 2074864
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| |||||| || ||||| ||||| | |||||| || |||||||| || |||||||||
Sbjct 2074865 AATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGG 2074924
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | ||| || | || |||||||| || | ||| || || | ||||| ||||||
Sbjct 2074925 ATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGTCTTA 2074984
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| ||||| || || ||||| || |||||
Sbjct 2074985 CCGGTCAATGTTTTGACGAAAATTTGCAT 2075013
Score = 143 bits (158), Expect = 6e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| || || ||| ||||||||| ||||||||||| | | || | ||||| ||
Sbjct 2075033 ACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 2075092
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| |||||| || ||||| ||||| | |||||| || |||||||| || |||||||||
Sbjct 2075093 AATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGG 2075152
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | ||| || | || |||||||| || | ||| || || | ||||| ||||||
Sbjct 2075153 ATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGTCTTA 2075212
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| ||||| || || ||||| || |||||
Sbjct 2075213 CCGGTCAATGTTTTGACGAAAATTTGCAT 2075241
Score = 143 bits (158), Expect = 6e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| || || ||| ||||||||| ||||||||||| | | || | ||||| ||
Sbjct 2075261 ACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 2075320
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| |||||| || ||||| ||||| | |||||| || |||||||| || |||||||||
Sbjct 2075321 AATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGG 2075380
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | ||| || | || |||||||| || | ||| || || | ||||| ||||||
Sbjct 2075381 ATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGTCTTA 2075440
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| ||||| || || ||||| || |||||
Sbjct 2075441 CCGGTCAATGTTTTGACGAAAATTTGCAT 2075469
Score = 140 bits (154), Expect = 7e-28
Identities = 157/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| || || ||| ||||||||| ||||||||||| | | || | ||||| ||
Sbjct 2075489 ACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 2075548
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| |||||| || ||||| ||||| | |||||| || |||||||| || |||||||||
Sbjct 2075549 AATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGG 2075608
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | ||| || | || |||||||| || | || || || | ||||| ||||||
Sbjct 2075609 ATCTTGGATTTGACATTGTCAATAGTGTCTGATGACTCAACCTCTAAGGTGATGGTCTTA 2075668
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATT 283100
|| ||||| || || ||||| || ||||||
Sbjct 2075669 CCGGTCAATGTTTTGACGAAAATTTGCATT 2075698
>seq6
Length=960076
Score = 123 bits (136), Expect = 5e-23
Identities = 143/193 (74%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||| | | || | ||||| || | |||||| || |||||
Sbjct 21994 TTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAA 21935
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | |||||| || || || || ||||||||||||||||| | || || |
Sbjct 21934 GATCAATCTTTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTGACATT 21875
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || ||||| || | || ||||| | |||||| || |||||||| | || || ||
Sbjct 21874 GTCAATGGTGTCAGATGACTCAACTTCTAAAGTGATGGTTTTACCCGTAAGGGTTTTGAC 21815
Query 283088 GAATATCTGCATT 283100
|| || ||||||
Sbjct 21814 AAAGATTTGCATT 21802
Score = 93.3 bits (102), Expect = 9e-14
Identities = 127/176 (72%), Gaps = 6/176 (3%)
Strand=Plus/Plus
Query 317029 GGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCA 317088
||||| ||||| | ||||| || |||| || ||||||| || || || |||||||||
Sbjct 406594 GGGAAACCTTCAACTTGACCATTGGCAATGGCTCTCATCAAGGTGGATTTACCAGCACCA 406653
Query 317089 TTGGGGCCGCAAAGACCATA---CCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTC 317145
|| || || || | |||||| | |||| |||| | |||| |||| ||||||
Sbjct 406654 TTTGGACCACACAAACCATATCTTCTGTTTC---TCTTTAATCTAAATTGGGTCTTGTTC 406710
Query 317146 AGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201
| | ||||| ||||||| |||| ||||||||||| | ||||| ||| || ||
Sbjct 406711 AACAAGATCTTGGCACCATAAGCCAACGAGAACTCACAGTTACACAAGTCTTCACC 406766
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738676957506
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |