Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq39 313 3e-80 >seq39 Length=2831396 Score = 313 bits (346), Expect = 3e-80 Identities = 634/932 (68%), Gaps = 28/932 (3%) Strand=Plus/Minus Query 23156 ttttttAAAAATCTTCATCTAAAGTGAATTTCACTG----CTTTAT---CACTATT---C 23205 ||||||| ||||||||||| || | || | || || |||||| |||| || | Sbjct 2634634 TTTTTTAGAAATCTTCATCAAATGCAAAAT-CATTGGCATCTTTATTTTCACTCTTGGCC 2634576 Query 23206 ATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCT 23265 || ||||| ||||| || || ||| | | |||| || ||||| |||||||| | Sbjct 2634575 ATGACACCAGCCTTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCC 2634516 Query 23266 AATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGAT 23325 || || ||||| |||||||||||||||||||| | ||| || || ||| Sbjct 2634515 AAGGAGATATTCTCCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTTTGTTACCC 2634456 Query 23326 AATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTT 23385 || | || | || || || |||||||||| ||||||||||||||| | | | || Sbjct 2634455 AAAGCAACCAATAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTC 2634396 Query 23386 ATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCA 23445 || || | | | ||||| | |||||| |||||| ||||||||| ||| || Sbjct 2634395 ATTCCCAACAAACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCT 2634336 Query 23446 TCTTTAATTATT---TGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAAC 23502 || |||| ||| | |||||| | ||| ||| || || ||||| |||| Sbjct 2634335 TCAGTAATAATTCTTTCAACAATCTTTGGGTCA---GGTCTATGTTGTAAATGAGCAAAC 2634279 Query 23503 AATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAAT 23562 || || |||||||||||| |||| |||||||| | || |||||||||||| ||||| Sbjct 2634278 AACAAGCATGCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAG 2634219 Query 23563 GTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAA 23622 || ||||||||||||||||||| || || | ||| || || | |||||| ||||| Sbjct 2634218 GTCAATCCTGGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTG 2634159 Query 23623 AAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAA 23682 || || |||||||||||||| ||||| || || | | | |||| ||||| || Sbjct 2634158 AAAAAGATACCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAA 2634099 Query 23683 TCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATT 23742 || ||||||| | | | ||||| ||||||| ||| | || |||||||| Sbjct 2634098 TCTTGAATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATA 2634039 Query 23743 GCTTTTAAGAGAAAAGTTTTTTCTTCATT---ATCTGTTATATATGTATCAATTAGTAAA 23799 || || || | ||| | |||| || ||| | ||||| || ||||| | ||| Sbjct 2634038 GCATTGAATAAGAAA---TCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAAT 2633982 Query 23800 CTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCT 23859 ||| |||| |||||||| ||||| || || || || |||||||| || | ||| Sbjct 2633981 GAATAAGTTTCTGAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCT 2633922 Query 23860 TCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCA 23919 |||| | |||||| ||| | |||| ||| | || ||||| ||||||||||||||| Sbjct 2633921 TCAGGAATTTGAACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCA 2633862 Query 23920 CTAGCAGCAAAGAAAG-CAAGAACATATTTTATAAAATGTCTTTCA---TCAGTTGATAA 23975 ||||| || || | ||||| | | || ||| |||||| ||| | || Sbjct 2633861 GAGGCAGCGAAAAAGGCCAAGATTCT-TCCAATGAAAAACCTTTCATTGTCATTCAATTT 2633803 Query 23976 TTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGC 24035 | | ||||||||| || |||||| |||||||| ||| || | ||||| || ||| Sbjct 2633802 CTCTCTCCAATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGC 2633743 Query 24036 CAAGGCACGCTTATACATTAGCCAAATATCAT 24067 || ||| |||||| ||||||| |||| Sbjct 2633742 TTCAGCCTTCTTGTACATTTGCCAAATTTCAT 2633711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487745774600