Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq6 104 2e-17
seq15 89.7 4e-13
>seq6
Length=960076
Score = 104 bits (114), Expect = 2e-17
Identities = 164/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| ||||||| ||||||||||| ||| | || ||||||||||||||||| ||||
Sbjct 22029 CCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 21970
Query 44171 A--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
| ||| | | || |||| || || || ||||||||||| | || ||||||| |
Sbjct 21969 AAAGTT--CTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTG 21912
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286
| | |||||||| || ||||| ||| || ||| | |||||||| | || ||
Sbjct 21911 GGATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGT--CAATGGTGTCAGATGACTC 21854
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | || || || || ||||| ||||| || || |||||||||||
Sbjct 21853 AACTTCTAAAGTGATGGTTTTACCCGTAAGGGTTTTGACAAAGATTTGCAT 21803
>seq15
Length=2091020
Score = 89.7 bits (98), Expect = 4e-13
Identities = 165/238 (69%), Gaps = 8/238 (3%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| ||||||||||| ||| | ||| || ||||| ||||||||
Sbjct 2075008 TTGCATACCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTA 2075067
Query 44164 ATCGG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221
|||| |||| | | || |||| || || || ||||| ||||| | || |||
Sbjct 2075068 GTCGGACAAAGTT--CTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGA 2075125
Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGG 44279
|||| || | |||||| || || ||||| || || ||| | || ||||| |
Sbjct 2075126 TCTGGTGGAATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGT--CAATAGTGTCTG 2075183
Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| ||||| | || || ||||| || || | || || ||||| ||||||||
Sbjct 2075184 ATGATTCAACCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2075241
Score = 89.7 bits (98), Expect = 4e-13
Identities = 165/238 (69%), Gaps = 8/238 (3%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| ||||||||||| ||| | ||| || ||||| ||||||||
Sbjct 2075236 TTGCATACCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTA 2075295
Query 44164 ATCGG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221
|||| |||| | | || |||| || || || ||||| ||||| | || |||
Sbjct 2075296 GTCGGACAAAGTT--CTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGA 2075353
Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGG 44279
|||| || | |||||| || || ||||| || || ||| | || ||||| |
Sbjct 2075354 TCTGGTGGAATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGT--CAATAGTGTCTG 2075411
Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| ||||| | || || ||||| || || | || || ||||| ||||||||
Sbjct 2075412 ATGATTCAACCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2075469
Score = 86.0 bits (94), Expect = 5e-12
Identities = 160/231 (69%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-- 44168
|| ||||||| ||||||||||| ||| | ||| || ||||| |||||||| ||||
Sbjct 2074787 CCACCTCTCAATCTCAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 2074846
Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
|||| | | || |||| || || || ||||| ||||| | || ||||||| |
Sbjct 2074847 AAAGTT--CTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTG 2074904
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286
| | |||||| || || ||||| || || ||| | || ||||| | |||||
Sbjct 2074905 GAATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGT--CAATAGTGTCTGATGATTC 2074962
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| | || || ||||| || || | || || ||||| ||||||||
Sbjct 2074963 AACCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2075013
Score = 86.0 bits (94), Expect = 5e-12
Identities = 169/245 (69%), Gaps = 10/245 (4%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| ||||||||||| ||| | ||| || ||||| ||||||||
Sbjct 2075464 TTGCATACCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTA 2075523
Query 44164 ATCGG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221
|||| |||| | | || |||| || || || ||||| ||||| | || |||
Sbjct 2075524 GTCGGACAAAGTT--CTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGA 2075581
Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGG 44279
|||| || | |||||| || || ||||| || || ||| | || ||||| |
Sbjct 2075582 TCTGGTGGAATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGT--CAATAGTGTCTG 2075639
Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGA 44339
|| || ||||| | || || ||||| || || | || || ||||| ||||||||
Sbjct 2075640 ATGACTCAACCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT-- 2075697
Query 44340 TGTGA 44344
|||||
Sbjct 2075698 TGTGA 2075702
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990228892063
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |