Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq6 104 2e-17 seq15 89.7 4e-13 >seq6 Length=960076 Score = 104 bits (114), Expect = 2e-17 Identities = 164/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||||| ||||||||||| ||| | || ||||||||||||||||| |||| Sbjct 22029 CCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 21970 Query 44171 A--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | ||| | | || |||| || || || ||||||||||| | || ||||||| | Sbjct 21969 AAAGTT--CTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTG 21912 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286 | | |||||||| || ||||| ||| || ||| | |||||||| | || || Sbjct 21911 GGATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGT--CAATGGTGTCAGATGACTC 21854 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | || || || || ||||| ||||| || || ||||||||||| Sbjct 21853 AACTTCTAAAGTGATGGTTTTACCCGTAAGGGTTTTGACAAAGATTTGCAT 21803 >seq15 Length=2091020 Score = 89.7 bits (98), Expect = 4e-13 Identities = 165/238 (69%), Gaps = 8/238 (3%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| ||||||||||| ||| | ||| || ||||| |||||||| Sbjct 2075008 TTGCATACCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTA 2075067 Query 44164 ATCGG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 |||| |||| | | || |||| || || || ||||| ||||| | || ||| Sbjct 2075068 GTCGGACAAAGTT--CTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGA 2075125 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGG 44279 |||| || | |||||| || || ||||| || || ||| | || ||||| | Sbjct 2075126 TCTGGTGGAATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGT--CAATAGTGTCTG 2075183 Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| ||||| | || || ||||| || || | || || ||||| |||||||| Sbjct 2075184 ATGATTCAACCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2075241 Score = 89.7 bits (98), Expect = 4e-13 Identities = 165/238 (69%), Gaps = 8/238 (3%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| ||||||||||| ||| | ||| || ||||| |||||||| Sbjct 2075236 TTGCATACCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTA 2075295 Query 44164 ATCGG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 |||| |||| | | || |||| || || || ||||| ||||| | || ||| Sbjct 2075296 GTCGGACAAAGTT--CTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGA 2075353 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGG 44279 |||| || | |||||| || || ||||| || || ||| | || ||||| | Sbjct 2075354 TCTGGTGGAATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGT--CAATAGTGTCTG 2075411 Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| ||||| | || || ||||| || || | || || ||||| |||||||| Sbjct 2075412 ATGATTCAACCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2075469 Score = 86.0 bits (94), Expect = 5e-12 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-- 44168 || ||||||| ||||||||||| ||| | ||| || ||||| |||||||| |||| Sbjct 2074787 CCACCTCTCAATCTCAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 2074846 Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 |||| | | || |||| || || || ||||| ||||| | || ||||||| | Sbjct 2074847 AAAGTT--CTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTG 2074904 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286 | | |||||| || || ||||| || || ||| | || ||||| | ||||| Sbjct 2074905 GAATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGT--CAATAGTGTCTGATGATTC 2074962 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | || || ||||| || || | || || ||||| |||||||| Sbjct 2074963 AACCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2075013 Score = 86.0 bits (94), Expect = 5e-12 Identities = 169/245 (69%), Gaps = 10/245 (4%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| ||||||||||| ||| | ||| || ||||| |||||||| Sbjct 2075464 TTGCATACCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTA 2075523 Query 44164 ATCGG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 |||| |||| | | || |||| || || || ||||| ||||| | || ||| Sbjct 2075524 GTCGGACAAAGTT--CTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGA 2075581 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGG 44279 |||| || | |||||| || || ||||| || || ||| | || ||||| | Sbjct 2075582 TCTGGTGGAATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGT--CAATAGTGTCTG 2075639 Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGA 44339 || || ||||| | || || ||||| || || | || || ||||| |||||||| Sbjct 2075640 ATGACTCAACCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT-- 2075697 Query 44340 TGTGA 44344 ||||| Sbjct 2075698 TGTGA 2075702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990228892063