Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq103 192 6e-44
>seq103
Length=904190
Score = 192 bits (212), Expect = 6e-44
Identities = 576/877 (66%), Gaps = 13/877 (1%)
Strand=Plus/Plus
Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735
|||||||| || || | |||||||| ||||| || || || ||| ||| || || |||
Sbjct 561374 TGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCTAAAGAAATGTTTTCC 561433
Query 16736 ATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793
|||||||| || || ||||| | || | | |||| | |||| || | | | ||
Sbjct 561434 ATGAAATCGAATGGGTTAGTGACGTTGTAGACCTTTTTGT-TACCT-AGCGCAACCAATA 561491
Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTA-TAAGA 16852
||||||| || |||||||| | |||||| |||||||| | |||||||| |||| ||||
Sbjct 561492 ATCTATCAGCAACAAATTCAACATATTGACACATTAAGTTACAGTTCATACCTAATAAGG 561551
Query 16853 CGTACCGGAAGAGCTTCCGTCAAA-AATCGTTGCTCTATAACAACCGCTTCCTTAATAAT 16911
| | || | ||| || | |||| ||| | || || |||| ||||| |||||||
Sbjct 561552 AG-ATTGGTAAAGCGTC-GACAAAGAATTCCTTTTCGATCTCAACAGCTTCAGTAATAAT 561609
Query 16912 ACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAA 16971
|| |||| | | ||| | | || | ||| |||| | ||| || ||
Sbjct 561610 TCTTTCAACAATAACAGCATCTGGTCTGTTTTGTAAATGAGAGAACAATAAACACGCAAA 561669
Query 16972 ATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCAT 17031
||| ||||| || ||||| | | || | ||||||||| || || || || |||||
Sbjct 561670 ATCAGTGTGTAAACCTTCGTCACGACATATCAATTCGTTAGAGAAGGTTAAACCAGGCAT 561729
Query 17032 CTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTC 17091
| |||| ||||| ||||| || || | ||| ||||| ||| ||||| ||||| ||
Sbjct 561730 CAAACCTCTCTTCTTCAACCAGAAAATGGAGGCAAACGAACCACTGAAGAAGATACCTTC 561789
Query 17092 GACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTT 17151
||| | || || || | ||||| ||| | | ||||| | || |||||| |
Sbjct 561790 GACAGCAGCGAAAGCAACTAATCTTTCACCAAATAAAGCGTCGTCGTCGTTGATCCATCT 561849
Query 17152 CTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTT 17211
|||| ||||| || | ||| || ||| || | || || || ||||||||
Sbjct 561850 TAAAGCCCAGTCGGCCTTCTTCTTGATACAAGGAATGTTATCGATAGCATTAAATAAGAA 561909
Query 17212 CTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTG 17271
|| ||||| | | || | || || || ||||| |||| ||| | || |||||
Sbjct 561910 ATCGGCTTCCTTTGGATCTTTGATGTAAGTGTCGATAAGTAACGAGTAAGTCTCAGAGTG 561969
Query 17272 TATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTC 17331
||||| ||||| || || || || || || || |||||| | |||| |||||
Sbjct 561970 AATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCTGGGGTTTGGACTTC 562029
Query 17332 CACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391
| |||| ||| | | |||||||| || || ||||| || || ||||||||
Sbjct 562030 AGCAGAGAAATTTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGCAGCAAAAAACGC 562089
Query 17392 CAATATATGCTTAATGAAATATTTTTCGTCCGGTGT--AA--GAACGCGCCAGTCCTTTA 17447
||| || |||||| ||| |||| | | ||| || || |||||| | |
Sbjct 562090 CAAGATTCTGGAAATGAAGTATCTTTCAT-TGTTGTTCAATTTTTCGTTCCAGTCTTGTG 562148
Query 17448 AATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACA 17507
||| || | || | |||||||| |||||| || || | || || || ||||
Sbjct 562149 TATCCTTACCCAAGTCGATTTCTTCGGCGGTCCAGAAGGACGCTTCGGCTTTCTTGTACA 562208
Query 17508 TATTCCAAATATCATTGTATTGTATGGGGAATACAAC 17544
| | |||||| || | ||| | || ||||| | |||
Sbjct 562209 TTTGCCAAATTTCGTGGTACTTGATTGGGAACAAAAC 562245
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517544351421240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |