Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq103 174 2e-38 >seq103 Length=904190 Score = 174 bits (192), Expect = 2e-38 Identities = 569/874 (65%), Gaps = 20/874 (2%) Strand=Plus/Plus Query 15914 TGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTTCC 15973 ||||||||||| || | |||||||||||||| || || || ||||||| || |||||| Sbjct 561374 TGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCTAAAGAAATGTTTTCC 561433 Query 15974 ATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAGAGTACCCCAGTTCCGTAAC---T 16030 || ||||| || || ||||| | | | ||| || || || || ||| | Sbjct 561434 ATGAAATCGAATGGGTTAGTGACGTTGTAGACCTTTTTGTTACCTAG---CGCAACCAAT 561490 Query 16031 AATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCT-ATAAG 16089 |||||||| || |||||||| | ||||||||||||||||| || || || ||| ||||| Sbjct 561491 AATCTATCAGCAACAAATTCAACATATTGACACATTAAGTTACAGTTCATACCTAATAAG 561550 Query 16090 TCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGAT 16149 | | || | ||| | || |||| | ||| ||| |||| ||||| |||| || Sbjct 561551 GAG-ATTGGTAAAGCGTCGACAAAGAATTCCTTTTCGATCTCAACAGCTTCAGTAATAAT 561609 Query 16150 ATCGGTGGCTCGTGTTTCAG---ACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGC 16206 || | | | ||| ||| | | | || || |||| || |||||| Sbjct 561610 -TC--TTTCAACAATAACAGCATCTGGTCTGTTTTGTAAATGAGAGAACAATAAACACGC 561666 Query 16207 GAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGG 16266 || || |||| |||||||| | | || | |||||| || || ||||| || || Sbjct 561667 AAAATCAGTGTGTAAACCTTCGTCACGACATATCAATTCGTTAGAGAAGGTTAAACCAGG 561726 Query 16267 CATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACC 16326 ||| |||| ||||| |||||||| || | ||||| || || ||||| ||||| Sbjct 561727 CATCAAACCTCTCTTCTTCAACCAGAAAATGGAGGCAAACGAACCACTGAAGAAGATACC 561786 Query 16327 CTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCA 16386 || |||| || ||||| | ||||| ||| | | ||| || | | ||||| Sbjct 561787 TTCGACAGCAGCGAAAGCAACTAATCTTTCACCAAATAAAGCGTCGTCGTCGTTGATCCA 561846 Query 16387 TTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAA 16446 | | |||| ||||| || | || |||||| || | || || || ||||| || Sbjct 561847 TCTTAAAGCCCAGTCGGCCTTCTTCTTGATACAAGGAATGTTATCGATAGCATTAAATAA 561906 Query 16447 TTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGA 16506 || ||||| ||| | || || || || || ||||| ||| | || || Sbjct 561907 GAAATCGGCTTCCTTTGGATCTTTGATGTAAGTGTCGATAAGTAACGAGTAAGTCTCAGA 561966 Query 16507 GTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTAC 16566 ||| ||||| || || || || || |||||||| || || || | |||| || Sbjct 561967 GTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCTGGGGTTTGGAC 562026 Query 16567 TTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAA 16626 ||| | | || ||| ||| ||| || || || ||||||||| ||||||||||| Sbjct 562027 TTCAGCAGAGAAATTTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGCAGCAAAAAA 562086 Query 16627 CGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAAT----ATGCCAATCTT 16682 |||||| || |||||| ||| |||| | | ||| | | | ||| |||| Sbjct 562087 CGCCAAGATTCTGGAAATGAAGTATCTTTCAT-TGTTGTTCAATTTTTCGTTCCAGTCTT 562145 Query 16683 TTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTAT 16742 | ||| || | || | |||||| | ||||| ||| || | || || || | Sbjct 562146 GTGTATCCTTACCCAAGTCGATTTCTTCGGCGGTCCAGAAGGACGCTTCGGCTTTCTTGT 562205 Query 16743 ACATTTTCCAAATATCATTGTA-TTGTATGGGAA 16775 |||||| |||||| || | ||| ||| |||||| Sbjct 562206 ACATTTGCCAAATTTCGTGGTACTTGATTGGGAA 562239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511413166212760