Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq103 174 2e-38
>seq103
Length=904190
Score = 174 bits (192), Expect = 2e-38
Identities = 569/874 (65%), Gaps = 20/874 (2%)
Strand=Plus/Plus
Query 15914 TGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTTCC 15973
||||||||||| || | |||||||||||||| || || || ||||||| || ||||||
Sbjct 561374 TGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCTAAAGAAATGTTTTCC 561433
Query 15974 ATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAGAGTACCCCAGTTCCGTAAC---T 16030
|| ||||| || || ||||| | | | ||| || || || || ||| |
Sbjct 561434 ATGAAATCGAATGGGTTAGTGACGTTGTAGACCTTTTTGTTACCTAG---CGCAACCAAT 561490
Query 16031 AATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCT-ATAAG 16089
|||||||| || |||||||| | ||||||||||||||||| || || || ||| |||||
Sbjct 561491 AATCTATCAGCAACAAATTCAACATATTGACACATTAAGTTACAGTTCATACCTAATAAG 561550
Query 16090 TCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGAT 16149
| | || | ||| | || |||| | ||| ||| |||| ||||| |||| ||
Sbjct 561551 GAG-ATTGGTAAAGCGTCGACAAAGAATTCCTTTTCGATCTCAACAGCTTCAGTAATAAT 561609
Query 16150 ATCGGTGGCTCGTGTTTCAG---ACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGC 16206
|| | | | ||| ||| | | | || || |||| || ||||||
Sbjct 561610 -TC--TTTCAACAATAACAGCATCTGGTCTGTTTTGTAAATGAGAGAACAATAAACACGC 561666
Query 16207 GAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGG 16266
|| || |||| |||||||| | | || | |||||| || || ||||| || ||
Sbjct 561667 AAAATCAGTGTGTAAACCTTCGTCACGACATATCAATTCGTTAGAGAAGGTTAAACCAGG 561726
Query 16267 CATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACC 16326
||| |||| ||||| |||||||| || | ||||| || || ||||| |||||
Sbjct 561727 CATCAAACCTCTCTTCTTCAACCAGAAAATGGAGGCAAACGAACCACTGAAGAAGATACC 561786
Query 16327 CTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCA 16386
|| |||| || ||||| | ||||| ||| | | ||| || | | |||||
Sbjct 561787 TTCGACAGCAGCGAAAGCAACTAATCTTTCACCAAATAAAGCGTCGTCGTCGTTGATCCA 561846
Query 16387 TTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAA 16446
| | |||| ||||| || | || |||||| || | || || || ||||| ||
Sbjct 561847 TCTTAAAGCCCAGTCGGCCTTCTTCTTGATACAAGGAATGTTATCGATAGCATTAAATAA 561906
Query 16447 TTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGA 16506
|| ||||| ||| | || || || || || ||||| ||| | || ||
Sbjct 561907 GAAATCGGCTTCCTTTGGATCTTTGATGTAAGTGTCGATAAGTAACGAGTAAGTCTCAGA 561966
Query 16507 GTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTAC 16566
||| ||||| || || || || || |||||||| || || || | |||| ||
Sbjct 561967 GTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCTGGGGTTTGGAC 562026
Query 16567 TTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAA 16626
||| | | || ||| ||| ||| || || || ||||||||| |||||||||||
Sbjct 562027 TTCAGCAGAGAAATTTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGCAGCAAAAAA 562086
Query 16627 CGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAAT----ATGCCAATCTT 16682
|||||| || |||||| ||| |||| | | ||| | | | ||| ||||
Sbjct 562087 CGCCAAGATTCTGGAAATGAAGTATCTTTCAT-TGTTGTTCAATTTTTCGTTCCAGTCTT 562145
Query 16683 TTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTAT 16742
| ||| || | || | |||||| | ||||| ||| || | || || || |
Sbjct 562146 GTGTATCCTTACCCAAGTCGATTTCTTCGGCGGTCCAGAAGGACGCTTCGGCTTTCTTGT 562205
Query 16743 ACATTTTCCAAATATCATTGTA-TTGTATGGGAA 16775
|||||| |||||| || | ||| ||| ||||||
Sbjct 562206 ACATTTGCCAAATTTCGTGGTACTTGATTGGGAA 562239
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511413166212760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |