Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq79 111 1e-19 >seq79 Length=395449 Score = 111 bits (122), Expect = 1e-19 Identities = 269/402 (67%), Gaps = 4/402 (1%) Strand=Plus/Plus Query 101866 GACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAAC 101925 |||||||||||| | ||||| || || || || || ||||||| | || |||| Sbjct 378873 GACATAAAATTGGCAGAATACGTGGCATGGGGGTAATGCCATTTTGGCAAAATCTGGCGG 378932 Query 101926 ATTCCAAGCACACATTAACATCCTTCTATCTGTA-GGGTTTGTTTTTATAGTATCAATCA 101984 ||||| || |||| | || |||||||| ||| ||||||||||| | | | || | Sbjct 378933 GTTCCACGCTGACATGATAATTCTTCTATC-GTATGGGTTTGTTTTCAATTTTTTGATAA 378991 Query 101985 ACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTG 102044 | || ||| || || | || | || |||||| || |||| ||||||| Sbjct 378992 CATCTTGTAACTGATCGAAACCATGGCCAGAATAATCTGTATCACAGTCTTTGTATTCTG 379051 Query 102045 CTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCAT 102104 |||| |||||||||||||| || ||||| || ||||| | || |||||| | ||| Sbjct 379052 CTCCAAAATGCCTCCACTGGAACCCATATACTGGTCCCAAGTCACCTTCACGACGGTCTG 379111 Query 102105 AAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAG 102164 || || | | ||| ||| || || || ||||| | ||||| || | || || Sbjct 379112 TCAACCCGATTGAATCCAAATATCCCCTCGACCCATTGCCTTCCCAGATCTTGACCCCTT 379171 Query 102165 CTGCTGATAGC-TCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACA 102223 |||||| | ||||||| |||||| ||||| | |||||| | || || | || | Sbjct 379172 TATCTGATAACTTCTTTGC-ATCAGTACATCCTTGTACAAACCATAGCAACTCATGAATA 379230 Query 102224 ACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAAT 102265 | ||||| | || || |||| ||||| | | |||||| Sbjct 379231 ATTGCTCTCGAGAAAACCTTCTTTGTAGTAAGTAAAGGAAAT 379272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361250350269443