Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq103 419 3e-112 seq138 87.8 2e-12 >seq103 Length=904190 Score = 419 bits (464), Expect = 3e-112 Identities = 1153/1748 (66%), Gaps = 33/1748 (2%) Strand=Plus/Plus Query 52925 ATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTT 52984 || || ||||| | ||||| |||||| ||||| || | || || |||||||| | Sbjct 447908 ATGTGAATATTTAACGATTGTGATTGATCAATGAATGCCGCTCTATCAGCAGCCATATCG 447967 Query 52985 ATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGG 53043 || || |||||| | ||||||||||| || ||||| || | | ||| || || || Sbjct 447968 ATAATATGCTTTTGAGAAATTTCCCAAACGGTCTTATATAAGGCTTTCAAT-TCATCGGG 448026 Query 53044 AAGGTTTG-TAT--TCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATC 53100 || ||| | || | |||||||| || | ||||| | ||||| || ||||| Sbjct 448027 AATGTTAGGTAAGGTTTGAATAGAACCGTTGTTGGAGATAATGTTGTTCTTCATATCATC 448086 Query 53101 ATTCCATAATTTTCTCTCGGTTAAAACTC-TAAGGAGATGCGGATTAACTACTTGAAATT 53159 ||||| | | || ||| | | ||| || | || || || | |||||||| Sbjct 448087 GTTCCAGATACCTAAATCCACCAAATCACGTAATAAG-TATGGGTTGACAATTTGAAATT 448145 Query 53160 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTAT 53219 | |||| ||| ||||| | || ||||||||| || || ||||| | | | ||||| | Sbjct 448146 CACCAGCCAAAACTCTTCTAGAGTAAATATTTGAAGTGTATGGTTCGAAACATTCATTGT 448205 Query 53220 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 53279 | || |||||||||| ||| || ||||| ||||| || || || ||||| ||||| | Sbjct 448206 TCCCTAAAATTTGAGAAGTGGAAGCAGTTGGCATCGGAGCAACTAATAAGGAGTTTCTGA 448265 Query 53280 GACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAA 53339 ||||| | | | || | || | || ||||| | ||| | || | || Sbjct 448266 TACCGTGTTTGGCCAAGTTTTGCTTCAAAGTATCCCAGTCCCATAATTCAGTTGGCTTTC 448325 Query 53340 CNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGT 53399 ||||| | ||| ||| || || ||| ||||||| | || Sbjct 448326 TTTCCCACAAGTCAAATTGTAAGACACCCTTAGATGCTGGAGAACCTTCATATGTTTGGT 448385 Query 53400 ATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTT 53459 | || ||||| | ||||| | |||| || || | ||||||| |||||||||| Sbjct 448386 ACGGGCCTTCGATTTCAGCCAATTCAATGGATGCTTCCACAGCACCGTGGTAAATGGTTT 448445 Query 53460 CGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGA- 53518 | || || | | |||| |||| ||||| | |||||||| |||| | | | Sbjct 448446 CAAAAATTTGGGTGTTTAATTCTTTAGCTTCTTGAGAGTCAAATGG-TAATCTCAATGCC 448504 Query 53519 ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 53578 ||||| || || ||||| ||||||||||| | | || ||||| | |||| | || ||| Sbjct 448505 ATAAAAGCATCGGCTAAACCTTGAACACCTAAGGCAATTGGTCTGTTTCTCATGTTCGAG 448564 Query 53579 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTC---TG 53635 | ||||||||||| || || || ||| || |||||| |||| | ||| | | Sbjct 448565 TTCCTAGCTTCTGGAACTGGGTAGTAGTTACGGTCGATAATTCTATTTAAGTTACGCGTC 448624 Query 53636 ACAATTACTTTGACCACATCCT-TCAGTTTGAGAAA----ATCAAATTGT----CCATCT 53686 |||| ||| | || || | | | ||| |||| | ||| | | | ||| Sbjct 448625 ACAAC--CTTAGTA-ACTTCATGTAACTTTTCGAAATCGTACCAACTGGAGGTACTGTCT 448681 Query 53687 ATTACAA-ACATGTTC--AATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCA 53743 || ||| | ||| | || |||||||| |||| |||||||| || || |||| || Sbjct 448682 CTTTCAACAAATGATGGTAAGGCAATAGAAGCCAAGTTACAAACAGCAACTTCATCAGGC 448741 Query 53744 TCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGT 53803 | | |||| | |||||| || | ||| | |||||| | ||||| || | | Sbjct 448742 GCAGAGTATTCAACAATCTCACAACACAAGTTAGATGATTTGATGATACCTAAGTTCTTT 448801 Query 53804 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATC 53863 ||||| |||| |||||||| ||||||||||| | || ||||| ||||| |||||| | Sbjct 448802 TGATTGGTCTTCTTGTTACAAGCATCCTTATATAACATAAATGGAGTACCGGTTTCAGTT 448861 Query 53864 TGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTT 53923 || | || | ||||| | ||| | ||||||| || | |||| | | ||| Sbjct 448862 TGTGCATCCAAGATCGCGTACCATAATTTTTGAGCCTTAATAACAGATCTACCACGGTTT 448921 Query 53924 TCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCA 53983 ||| |||||||| | || ||| ||| || || || || | |||| || || Sbjct 448922 TCTTTTTCGTATTTGGAGTATAATTCTTCGAATTCATCACCATAGACATCTGATAAACCT 448981 Query 53984 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 54043 ||| ||| | ||| | | || | ||| || |||| | | |||| ||||| || Sbjct 448982 GGAGCTTCGTTTGGAGAGAATAATGTCCAGTCACCGTTTTGTTCAACTCTCTTCATGAAT 449041 Query 54044 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTA 54103 | |||||||||||| | || |||| |||||| | ||||| ||| || || || | Sbjct 449042 AAATCAGGAATCCATAAGGCCGGGAATAAATCTCTAGCTCTATTTTCTTCTTTGCCGTGA 449101 Query 54104 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTC 54163 |||||| | | ||| | ||| | | ||||| | |||||| ||||||||||| | | Sbjct 449102 TTCTTTCTGATATCTATGAAGTCGAATATATCCGCATGCCAAGGTTCCAAGTAAAGAGCA 449161 Query 54164 ATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 54223 | | ||||| | ||||| || || ||||| | || | ||||||||| ||| |||| Sbjct 449162 AAGGCACCAGGTCTCTTGTTACCACCTTGATCCACATAACGAGCGGTGTTGTTAAAAACA 449221 Query 54224 CTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTG 54283 | | ||||||||| |||||||| || | ||| ||||| |||| ||| || | ||| || Sbjct 449222 CGAACCATTGGAATGATACCATTAGAAGTACCGTTGGTACCGGCGATGTAAGTACCAGTG 449281 Query 54284 GCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCAT 54343 | |||||| || ||| || ||| || || ||||| | || || || || || || Sbjct 449282 GAACGAATGTTGTGAATGTGTAAACCAATGCCACCTGCACTCTTGGAAATCAAAGCACA- 449340 Query 54344 CGT-TTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACA 54402 ||| || || || || ||||| || || || |||||| |||| || || ||||| Sbjct 449341 CGTCTTCAAGGTGTCGTAGATACCGTCAATGGAGTCATCCTTCATAGCAACTAAGAAACA 449400 Query 54403 GCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAA 54462 ||||||||| | | | || || |||||||||||||| || ||| |||| || || Sbjct 449401 AGAAGACATTTGTGGGCTAGGGGTACCAGCATTAAATAAGGTTGGCGAACCGTGGGTGAA 449460 Query 54463 CCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATC-CCATTGATGAA 54521 || ||| || | | ||||||| |||| || || ||||| || | || | Sbjct 449461 GTATCTTTGGGACATCATGTTGTACGATTCGACGACTCTCTCGATATCGTCACCG-TGTA 449519 Query 54522 TTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTT 54581 | || || || || | ||| | || || || |||||||| | | ||| ||| ||| Sbjct 449520 TACCAACAGCAACTCTCATAATCAAATGTTGTGGTCTTTCGGCAACCTTACCGTTGATTC 449579 Query 54582 TCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTT 54641 ||| |||||| ||| |||||||||| || || || || |||||||| ||| || || | Sbjct 449580 TCAACAAGTAAGATCTTTCCAAAGTCTTGAATCCGAAGTAGTTGTAATTAAAATCACGGT 449639 Query 54642 CGTAAATA 54649 | ||||| Sbjct 449640 C--AAATA 449645 Score = 196 bits (216), Expect = 6e-45 Identities = 583/888 (66%), Gaps = 26/888 (3%) Strand=Plus/Plus Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903 || ||||| |||| || | |||||||| || || || ||||| |||| || || ||| Sbjct 561371 TTCTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCTAAAGAAATGTTT 561430 Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATC 23963 |||||||||||| |||| || || || || |||| |||| || | || | Sbjct 561431 TCCATGAAATCGAATGGGTTAGTGACGTTGTAGACCTTTTTGTTACCTAGCGCAACCAAT 561490 Query 23964 AATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTA-TAAG 24022 |||||||| || ||||| || | |||| ||| | | ||| ||||| |||| |||| Sbjct 561491 AATCTATCAGCAACAAATTCAACATATTGACACATTAAGTTACAGTTCATACCTAATAAG 561550 Query 24023 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 24082 | ||| | ||| | || ||||| | ||| || || || || || ||||| Sbjct 561551 GAGAT-TGGTAAAGCGTCGACAAAGAATTCCTTTTCGATCTCAACAGCTTCAGTAATAAT 561609 Query 24083 AGATCTT---ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 24139 |||| || | | || ||| | |||||| |||| ||||| || Sbjct 561610 ---TCTTTCAACAATAACAGCATCTGGTCTGTTTTGTAAATGAGAGAACAATAAACACGC 561666 Query 24140 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 24199 ||||| ||||| ||| ||||| | || || |||||||| || || || | || || Sbjct 561667 AAAATCAGTGTGTAAACCTTCGTCACGACATATCAATTCGTTAGAGAAGGTTAAACCAGG 561726 Query 24200 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 24259 ||| | || | ||| || | ||| || ||||| ||||| || ||| ||||| || || Sbjct 561727 CATCAAACCTCTCTTCTTCAACCAGAAAATGGAGGCAAACGAACCACTGAAGAAGATACC 561786 Query 24260 TTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---ACCGGCGCTGTCATGTATCCA 24316 ||| || || || || |||| | |||||| ||| | | || || ||| | ||||| Sbjct 561787 TTCGACAGCAGCGAAAGCAACTAATCTTTCACCAAATAAAGCGTCGTCGTCGTTGATCCA 561846 Query 24317 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 24376 || |||||| ||||||||||| || | |||||| || | || ||||||||||| | Sbjct 561847 TCTTAAAGCCCAGTCGGCCTTCTTCTTGATACAAGGAATGTTATCGATAGCATTAAATAA 561906 Query 24377 ATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA-TACATTTCCG 24435 | | ||| || |||||| | || || || || | | || | || | || | Sbjct 561907 GAAATCGGCTTCCTTTGGATCTTTGATGTAAGTGTCGATAAGTA-ACGAGTAAGTCTCAG 561965 Query 24436 AATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTA 24495 | ||||||||||| || ||||| || || |||||||| | || || | | || | Sbjct 561966 AGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCTGGGGTTTGGA 562025 Query 24496 CTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA 24555 |||| | | || ||| | || ||||| || || || |||||| || ||||||| Sbjct 562026 CTTCAGCAGAGAAATTTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGCAGCAAAAA 562085 Query 24556 ACGCCAATACATGTTTT----ATAAAATATTTTTCGTCTGGTGTT-AGTTT---ATTCCA 24607 ||||||| | || | || || ||| |||| | || |||| | ||| ||||| Sbjct 562086 ACGCCAAGA----TTCTGGAAATGAAGTATCTTTCAT-TGTTGTTCAATTTTTCGTTCCA 562140 Query 24608 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 24667 || | |||| ||| | || | |||||| | ||||| || || || || || || Sbjct 562141 GTCTTGTGTATCCTTACCCAAGTCGATTTCTTCGGCGGTCCAGAAGGACGCTTCGGCTTT 562200 Query 24668 TTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715 || ||||| | ||| || || || || | ||||| || | ||| || Sbjct 562201 CTTGTACATTTGCCAAATTTCGTGGTACTTGATTGGGAACAAAACGAA 562248 >seq138 Length=177124 Score = 87.8 bits (96), Expect = 2e-12 Identities = 204/302 (68%), Gaps = 7/302 (2%) Strand=Plus/Plus Query 52994 TTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG-- 53051 ||||||| |||||||||| || ||||| | | || | |||| |||| || | Sbjct 78630 TTTTGTGATATTTCCCAAACTGTCTTATATAGTTTTTTTAGTTCTTTCGGAATATTAGGT 78689 Query 53052 -TATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCAT-CATTCCATAA 53109 |||| ||||| ||||| | | ||||| | || || || | || ||||||| || Sbjct 78690 ATATTTTGAATTGATCCGTTGTTCATGATAATTTTGTTTTTCAT-TGATGCATTCCA-AA 78747 Query 53110 TTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACA 53168 || | || | ||| |||| | | || | |||||||||||| |||| || || | Sbjct 78748 TTCCCAAATCAATCAAATCTCTCAATAAATACTTGTTAACTACTTGATATTCACCTGATA 78807 Query 53169 ATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAA 53228 | |||| | | |||| | ||| ||||| ||||| | | |||||| ||| |||| Sbjct 78808 AAACTCGTCTATTGTATAAATTGGACGTATATGGTTCGAAGCATTCATTAAATCCTAAAA 78867 Query 53229 TTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATG 53288 |||| | || ||||| || ||||| ||||| || | || |||||||| ||| ||| Sbjct 78868 TTTGGGATGTAGATGCTGTAGGCATTGGTGCTACTAGCAATGAATTTCTAACTCCGAATG 78927 Query 53289 TT 53290 || Sbjct 78928 TT 78929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593720167646640