Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq103 212 6e-50
>seq103
Length=904190
Score = 212 bits (234), Expect = 6e-50
Identities = 488/728 (67%), Gaps = 18/728 (2%)
Strand=Plus/Plus
Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003
|| || || ||||| ||||||||||| ||||| || || || || |||| ||||| |||
Sbjct 561371 TTCTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCTAAAGAAATGTTT 561430
Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAAT 16063
||||| ||||| || || || | ||| || | | || | | | ||||
Sbjct 561431 TCCATGAAATCGAATGGGTTAGTGACGTTGTAGACCTTTTTGTTACCTAGCGCAACCAAT 561490
Query 16064 AATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAAT 16123
|||||||| || |||||||| | ||| || |||||| | ||||||||| |||| |||
Sbjct 561491 AATCTATCAGCAACAAATTCAACATATTGACACATTAAGTTACAGTTCATACCTAATAAG 561550
Query 16124 TTAACAGGGATTGCTTCTGTTAAAAAAtt-tttttCTATATTAACCGCTTCAATGATTAT 16182
| || | || || | ||| |||| ||||| || | ||| |||||| | || ||
Sbjct 561551 GAGATTGGTAAAGCGTC-GACAAAGAATTCCTTTTCGATCTCAACAGCTTCAGTAATAAT 561609
Query 16183 ATCTCTTACTACACTA--TTTAAC-GGAGGGTTTAATAAGTGTTTAAACATTATACAAGC 16239
|||| | ||| || | | || |||| ||| || |||| || ||| ||
Sbjct 561610 ---TCTTTCAACAATAACAGCATCTGGTCTGTTTTGTAAATGAGAGAACAATAAACACGC 561666
Query 16240 AAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGG 16299
||||||| || || |||||||| | || ||| || ||||| || || || | ||| ||
Sbjct 561667 AAAATCAGTGTGTAAACCTTCGTCACGACATATCAATTCGTTAGAGAAGGTTAAACCAGG 561726
Query 16300 CATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACC 16359
||| | |||| || || | ||| || || | |||||| |||||| ||||| |||||
Sbjct 561727 CATCAAACCTCTCTTCTTCAACCAGAAAATGGAGGCAAACGAACCACTGAAGAAGATACC 561786
Query 16360 TTCAACTGCGGCAAATGCAACCAATCGCTCACCGTA-----CGTTCTAtttttactttct 16414
||| || || || || ||||| |||| ||||| | ||| | | | ||
Sbjct 561787 TTCGACAGCAGCGAAAGCAACTAATCTTTCACCAAATAAAGCGTCGTCGT----CGTT-G 561841
Query 16415 atccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTA 16474
|||||| || |||||| | || || | || | ||| ||||| || || ||||||
Sbjct 561842 ATCCATCTTAAAGCCCAGTCGGCCTTCTTCTTGATACAAGGAATGTTATCGATAGCATTA 561901
Query 16475 AATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATT 16534
||||| ||| ||| || |||| || ||||| || || ||||| || |
Sbjct 561902 AATAAGAAATCGGCTTCCTTTGGATCTTTGATGTAAGTGTCGATAAGTAACGAGTAAGTC 561961
Query 16535 TCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATT 16594
|| || ||||| || ||||| || || |||||||| || || | ||||| | ||
Sbjct 561962 TCAGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCTGGGGTT 562021
Query 16595 TGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCA 16654
|| ||||||| | || |||| | ||||||||||| || || || || ||| |||
Sbjct 562022 TGGACTTCAGCAGAGAAATTTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGCAGCA 562081
Query 16655 AAAAACGC 16662
||||||||
Sbjct 562082 AAAAACGC 562089
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462510884189800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |