Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq103 246 3e-60 >seq103 Length=904190 Score = 246 bits (272), Expect = 3e-60 Identities = 579/859 (67%), Gaps = 19/859 (2%) Strand=Plus/Plus Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972 || || || ||||| ||||| ||||| |||||||| || ||||| | | || || ||| Sbjct 561371 TTCTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCTAAAGAAATGTTT 561430 Query 13973 TCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAG 14031 ||||| ||||| ||||| || || ||| | | || || | |||||| | | | Sbjct 561431 TCCATGAAATCGAATGGGTTAGT-GACGTTGTAGACCTTTTTGTTACCTAGCGCAACCAA 561489 Query 14032 TAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 14091 ||||||||| |||| || |||| ||||||| ||||||| | ||| |||||||||| || Sbjct 561490 TAATCTATCAGCAACAAATTCAACATATTGACACATTAAGTTACAGTTCATACCTAATAA 561549 Query 14092 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 14151 | || | | | || ||||| ||||| || ||||| || | ||||| Sbjct 561550 GGAGATTGGTAAAGCGTCGACAAAGAATTCCTTTTCGATCTCAACAGCTTCAGTAATAAT 561609 Query 14152 AATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 14211 | || ||| || | || | || || ||| || | |||||||||||| Sbjct 561610 TCTTTCAACAATAACAGCATCTGGTCTGTTTTGTAAATGAGAGAACAATAAACACGCAAA 561669 Query 14212 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 14271 |||| || | || || || | || || | |||||| || || ||||| || ||||| Sbjct 561670 ATCAGTGTGTAAACCTTCGTCACGACATATCAATTCGTTAGAGAAGGTTAAACCAGGCAT 561729 Query 14272 CAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTC 14331 ||| |||| || || ||||| || || | || || || || ||||| || || || Sbjct 561730 CAAACCTCTCTTCTTCAACCAGAAAATGGAGGCAAACGAACCACTGAAGAAGATACCTTC 561789 Query 14332 AACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGAT-ATCCATT 14390 || ||||| || || | ||||| ||| ||||| | || | | | ||| | |||||| Sbjct 561790 GACAGCAGCGAAAGCAACTAATCTTTCACCAAATAAAGCGTCGTCG-TCGTTGATCCATC 561848 Query 14391 TTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAAT 14450 || |||||| || | || || || ||| || || | || |||||||||||||| Sbjct 561849 TTAAAGCCCAGTCGGCCTTCTTCTTGATACAAGGAATGTTATCGATAGCATTAAATAAGA 561908 Query 14451 GTTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGA 14508 || |||| |||| | ||| ||||| || || |||||||| || | ||||| Sbjct 561909 AATCGGCTTC-CTTTGGATCTT-TGATGTAAGTGTCGATAAGTAACGAGTAAGTCTCAGA 561966 Query 14509 GTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTAC 14568 ||| ||||||||||| || || |||||||| ||||| | ||||||| ||| || Sbjct 561967 GTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCTGGGGTTTGGAC 562026 Query 14569 CTCTG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAA 14627 || | || |||| |||| |||| ||||| || || ||||| ||| ||| ||||||| Sbjct 562027 TTCAGCAGAGAAAT-TTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGCAGCAAAAA 562085 Query 14628 ATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTG---AGTTTT---TTCCAAT 14681 | ||||| || | ||| |||||| || ||||||| || | |||| ||||| | Sbjct 562086 ACGCCAAGATTCTGGAAATGAAGTAT--CT-TTCATTGTTGTTCAATTTTTCGTTCCAGT 562142 Query 14682 CGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTT 14741 | | ||||||| | || | ||| || | ||||| || || | ||||| | Sbjct 562143 CTTGTGTATCCTTACCCAAGTCGATTTCTTCGGCGGTCCAGAAGGACGCTTCGGCTTTCT 562202 Query 14742 TATACATTACCCATATTTC 14760 | |||||| ||| ||||| Sbjct 562203 TGTACATTTGCCAAATTTC 562221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482344436341240