Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq103 246 3e-60
>seq103
Length=904190
Score = 246 bits (272), Expect = 3e-60
Identities = 579/859 (67%), Gaps = 19/859 (2%)
Strand=Plus/Plus
Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972
|| || || ||||| ||||| ||||| |||||||| || ||||| | | || || |||
Sbjct 561371 TTCTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCTAAAGAAATGTTT 561430
Query 13973 TCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAG 14031
||||| ||||| ||||| || || ||| | | || || | |||||| | | |
Sbjct 561431 TCCATGAAATCGAATGGGTTAGT-GACGTTGTAGACCTTTTTGTTACCTAGCGCAACCAA 561489
Query 14032 TAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 14091
||||||||| |||| || |||| ||||||| ||||||| | ||| |||||||||| ||
Sbjct 561490 TAATCTATCAGCAACAAATTCAACATATTGACACATTAAGTTACAGTTCATACCTAATAA 561549
Query 14092 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 14151
| || | | | || ||||| ||||| || ||||| || | |||||
Sbjct 561550 GGAGATTGGTAAAGCGTCGACAAAGAATTCCTTTTCGATCTCAACAGCTTCAGTAATAAT 561609
Query 14152 AATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 14211
| || ||| || | || | || || ||| || | ||||||||||||
Sbjct 561610 TCTTTCAACAATAACAGCATCTGGTCTGTTTTGTAAATGAGAGAACAATAAACACGCAAA 561669
Query 14212 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 14271
|||| || | || || || | || || | |||||| || || ||||| || |||||
Sbjct 561670 ATCAGTGTGTAAACCTTCGTCACGACATATCAATTCGTTAGAGAAGGTTAAACCAGGCAT 561729
Query 14272 CAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTC 14331
||| |||| || || ||||| || || | || || || || ||||| || || ||
Sbjct 561730 CAAACCTCTCTTCTTCAACCAGAAAATGGAGGCAAACGAACCACTGAAGAAGATACCTTC 561789
Query 14332 AACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGAT-ATCCATT 14390
|| ||||| || || | ||||| ||| ||||| | || | | | ||| | ||||||
Sbjct 561790 GACAGCAGCGAAAGCAACTAATCTTTCACCAAATAAAGCGTCGTCG-TCGTTGATCCATC 561848
Query 14391 TTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAAT 14450
|| |||||| || | || || || ||| || || | || ||||||||||||||
Sbjct 561849 TTAAAGCCCAGTCGGCCTTCTTCTTGATACAAGGAATGTTATCGATAGCATTAAATAAGA 561908
Query 14451 GTTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGA 14508
|| |||| |||| | ||| ||||| || || |||||||| || | |||||
Sbjct 561909 AATCGGCTTC-CTTTGGATCTT-TGATGTAAGTGTCGATAAGTAACGAGTAAGTCTCAGA 561966
Query 14509 GTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTAC 14568
||| ||||||||||| || || |||||||| ||||| | ||||||| ||| ||
Sbjct 561967 GTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCTGGGGTTTGGAC 562026
Query 14569 CTCTG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAA 14627
|| | || |||| |||| |||| ||||| || || ||||| ||| ||| |||||||
Sbjct 562027 TTCAGCAGAGAAAT-TTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGCAGCAAAAA 562085
Query 14628 ATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTG---AGTTTT---TTCCAAT 14681
| ||||| || | ||| |||||| || ||||||| || | |||| ||||| |
Sbjct 562086 ACGCCAAGATTCTGGAAATGAAGTAT--CT-TTCATTGTTGTTCAATTTTTCGTTCCAGT 562142
Query 14682 CGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTT 14741
| | ||||||| | || | ||| || | ||||| || || | ||||| |
Sbjct 562143 CTTGTGTATCCTTACCCAAGTCGATTTCTTCGGCGGTCCAGAAGGACGCTTCGGCTTTCT 562202
Query 14742 TATACATTACCCATATTTC 14760
| |||||| ||| |||||
Sbjct 562203 TGTACATTTGCCAAATTTC 562221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482344436341240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |