Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq141 86.0 5e-12 seq101 82.4 6e-11 >seq141 Length=295507 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/214 (69%), Gaps = 1/214 (0%) Strand=Plus/Plus Query 18112 TAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAAT 18171 |||| |||| ||| | ||| ||||| ||||| || ||||| || | | |||| | | || Sbjct 197119 TAAG-ACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGCCAT 197177 Query 18172 CTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTAT 18231 |||| ||||| || || ||| | || | ||| |||||||| || | |||||||| | Sbjct 197178 CTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGATCTGGCGGAATACCTTCCTTGT 197237 Query 18232 CGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGC 18291 | ||| | |||||| | ||| ||||| | ||| ||| | ||| ||| Sbjct 197238 CTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAATGG 197297 Query 18292 TTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | || || ||||| || || || ||||||||||| Sbjct 197298 TCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 197331 >seq101 Length=125820 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/217 (69%), Gaps = 1/217 (0%) Strand=Plus/Plus Query 18112 TAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAAT 18171 |||| |||| ||| | || ||||| |||||||||||||| || | | ||| ||| || Sbjct 105261 TAAG-ACCAAGTGTAAAGTGGATTCCTTTTGAATGTTGTAATCAGATAAGGTTCTACCAT 105319 Query 18172 CTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTAT 18231 |||| ||||| || || || |||| | |||||||||||| || | ||||| || | Sbjct 105320 CTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCTTTGT 105379 Query 18232 CGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGC 18291 | || | |||||| | ||| ||||| | || ||| | ||| ||| Sbjct 105380 CTTGGATCTTAGACTTGACATTGTCAATGGTGTCCGAAGATTCAACTTCTAAGGTAATGG 105439 Query 18292 TTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 | || || || || || || || |||||||||||||| Sbjct 105440 TCTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTT 105476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379343107711785