Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq141 86.0 5e-12
seq101 82.4 6e-11
>seq141
Length=295507
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/214 (69%), Gaps = 1/214 (0%)
Strand=Plus/Plus
Query 18112 TAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAAT 18171
|||| |||| ||| | ||| ||||| ||||| || ||||| || | | |||| | | ||
Sbjct 197119 TAAG-ACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGCCAT 197177
Query 18172 CTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTAT 18231
|||| ||||| || || ||| | || | ||| |||||||| || | |||||||| |
Sbjct 197178 CTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGATCTGGCGGAATACCTTCCTTGT 197237
Query 18232 CGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGC 18291
| ||| | |||||| | ||| ||||| | ||| ||| | ||| |||
Sbjct 197238 CTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAATGG 197297
Query 18292 TTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
| || || ||||| || || || |||||||||||
Sbjct 197298 TCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 197331
>seq101
Length=125820
Score = 82.4 bits (90), Expect = 6e-11
Identities = 149/217 (69%), Gaps = 1/217 (0%)
Strand=Plus/Plus
Query 18112 TAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAAT 18171
|||| |||| ||| | || ||||| |||||||||||||| || | | ||| ||| ||
Sbjct 105261 TAAG-ACCAAGTGTAAAGTGGATTCCTTTTGAATGTTGTAATCAGATAAGGTTCTACCAT 105319
Query 18172 CTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTAT 18231
|||| ||||| || || || |||| | |||||||||||| || | ||||| || |
Sbjct 105320 CTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCTTTGT 105379
Query 18232 CGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGC 18291
| || | |||||| | ||| ||||| | || ||| | ||| |||
Sbjct 105380 CTTGGATCTTAGACTTGACATTGTCAATGGTGTCCGAAGATTCAACTTCTAAGGTAATGG 105439
Query 18292 TTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
| || || || || || || || ||||||||||||||
Sbjct 105440 TCTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTT 105476
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343107711785
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |