Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq103 183 3e-41
seq138 98.7 9e-16
seq141 87.8 2e-12
seq101 84.2 2e-11
>seq103
Length=904190
Score = 183 bits (202), Expect = 3e-41
Identities = 388/577 (67%), Gaps = 4/577 (1%)
Strand=Plus/Plus
Query 23405 TCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGC 23464
|| ||||||||| |||||| | | ||| | ||||| || | ||||||||||| ||
Sbjct 449087 TCTTCTTTGCCGTGATTCTTTCTGATATCTATGAAGTCGAATATATCCGCATGCCAAGGT 449146
Query 23465 TCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCC 23524
|| | ||||| ||||| || || |||||||| || || || ||||| || ||||| ||
Sbjct 449147 TCCAAGTAAAGAGCAAAGGCACCAGGTCTCTTGTTACCACCTTGATCCACATAACGAGCG 449206
Query 23525 GTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCC 23584
|||||||| | || | | ||| || | || ||| || || | ||| || ||
Sbjct 449207 GTGTTGTTAAAAACACGAACCATTGGAATGATACCATTAGAAGTACCGTTGGTACCGGCG 449266
Query 23585 ACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTC 23644
| | ||| | | |||| |||||||| ||| ||||| ||||| || | ||
Sbjct 449267 ATGTAAGTACCAGTGGAACGAATGTTGTGAATGTGTAAACCAATGCCACCTGCACTCTTG 449326
Query 23645 GATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTC 23704
|| |||| || || |||| ||||||||||| || || ||| ||| || || |
Sbjct 449327 GAAATCAAAGCACACGTCTTCAAGGTGTCGTAGATACCGTCAATGGAGTCATCCTTCATA 449386
Query 23705 GCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGG 23764
|| || |||||||| ||||||||||| | | || ||| | || || | || ||
Sbjct 449387 GCAACTAAGAAACAAGAAGACATTTGTGGGCTAGGGGTACCAGCATTAAATAAGGTTGGC 449446
Query 23765 CTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATG 23824
|||| || ||||||| | ||||| | ||||||| |||| | | || ||
Sbjct 449447 GAACCGTGGGTGAAGTATCTTTGGGACATCATGTTGTACGATTCGACGACTCTCTCGATA 449506
Query 23825 TCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG--ACCG 23882
|| || ||||||||||| | || || | ||| |||| | ||| ||||| ||| | |
Sbjct 449507 TCGTCACCGTGTATACCAACAGCAACTCTCATAATCAAATGTTGTGGTCTTTCGGCAACC 449566
Query 23883 TGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCAT 23942
| | ||||| ||| | |||| || || | || || || || ||||| || |||| |
Sbjct 449567 TTA--CCGTTGATTCTCAACAAGTAAGATCTTTCCAAAGTCTTGAATCCGAAGTAGTTGT 449624
Query 23943 AGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979
| ||||| ||||| || || || ||||| |||||
Sbjct 449625 AATTAAAATCACGGTCAAATACAATTGCCGAGTTCAA 449661
Score = 141 bits (156), Expect = 8e-29
Identities = 518/802 (65%), Gaps = 17/802 (2%)
Strand=Plus/Minus
Query 57507 GATGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCA 57566
|| |||||| | ||| || || | ||| | || || |||| || || | || |
Sbjct 562281 GAAGAACCATTGTTGATGGAAAACACGCGTCGTTTCGTTTTGTTCCCAATCAAGTACCAC 562222
Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626
|| |||||| | |||||||| || || ||||| || || ||||||| ||||||| | |||
Sbjct 562221 GAAATTTGGCAAATGTACAAGAAAGCCGAAGCGTCCTTCTGGACCGCCGAAGAAATCGAC 562162
Query 57627 CTGTCTAAGGATCTGAGCGATTGG---GATTCCCTCAAAGAATCTGAGAGAAATTTTATT 57683
|| ||||||| || ||| || | || | ||| ||| | || |||
Sbjct 562161 TTGGGTAAGGATACACAAGACTGGAACGAAAAATTGAACAACAATGAAAGATACTTCATT 562102
Query 57684 AAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAA 57743
| ||||||||||| || || || || |||||||| ||||| || ||||| |||
Sbjct 562101 TCCAGAATCTTGGCGTTTTTTGCTGCTTCTGACGGTATTGTCAACGAAAACTTGGTTGAA 562042
Query 57744 AGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCC 57803
| || || ||||| ||| | || || | || || || || || ||| |
Sbjct 562041 AATTTCTCTGCTGAAGTCCAAACCCCAGAAGCCAAGTGTTTCTATGGTTTCCAAATCATG 561982
Query 57804 ATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA--CA 57861
|| |||||| | || || || | || ||| |||| ||||| || ||| | || || ||
Sbjct 561981 ATGGAAAACATTCACTCTGAGACTTACTCGTTACTTATCGACACTTACATCAAAGATCCA 561922
Query 57862 ACGACGAGAAACGTAGACTG-TTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAG 57920
| | || | || || || || || ||||| | || || ||| ||||||
Sbjct 561921 AAG--GA-AGCCGATTTCTTATTTAATGCTATCGATAACATTCCTTGTATCAAGAAGAAG 561865
Query 57921 GCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATC 57980
|| || ||| | | | |||||| || || | || || | || || || |
Sbjct 561864 GCCGACTGGGCTTTAAGATGGATCAACGACGACGACGCTTTATTTGGTGAAAGATTAGTT 561805
Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040
|| ||||| || ||||||||||| ||||| || ||||| | || || ||| ||
Sbjct 561804 GCTTTCGCTGCTGTCGAAGGTATCTTCTTCAGTGGTTCGTTTGCCTCCATTTTCTGGTTG 561745
Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100
||||| | || ||||||| || | || || ||||| ||||||| || |||||
Sbjct 561744 AAGAAGAGAGGTTTGATGCCTGGTTTAACCTTCTCTAACGAATTGATATGTCGTGACGAA 561685
Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCG- 58159
||| | || |||||||||||||| || ||| |||| |||| || |||| ||| |
Sbjct 561684 GGTTTACACACTGATTTTGCGTGTTTATTGT--TCTCTCATTTACA--AAACAGACCAGA 561629
Query 58160 GGATCGCATCTTGGA---CATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCAC 58216
| | || | || ||||| || || || || | ||||||||| || || |
Sbjct 561628 TGCTGTTATTGTTGAAAGAATTATTACTGAAGCTGTTGAGATCGAAAAGGAATTCTTTGT 561569
Query 58217 CGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGA 58276
||| || |||| | || | | ||||||||| | | || |||| | || ||||
Sbjct 561568 CGACGCTTTACCAATCTCCTTATTAGGTATGAACTGTAACTTAATGTGTCAATATGTTGA 561509
Query 58277 GTTTGTTGCCGACAGACTTTTG 58298
|||||||| || ||| | |||
Sbjct 561508 ATTTGTTGCTGATAGATTATTG 561487
>seq138
Length=177124
Score = 98.7 bits (108), Expect = 9e-16
Identities = 146/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 23353 CATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTT 23412
|||||| | ||| |||||||||| | || || | || ||||| | || || |||||
Sbjct 79688 CATAAATAAATCTGGTATCCATAATCCATAAAATAAATCACGGGCTCTCATTTCTTCTTT 79747
Query 23413 GCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTA 23472
||| ||| || ||||| ||||| | || | || ||||| || || || ||
Sbjct 79748 CCCGTGGTTTTTCTTCAAGTCCAATACACTGAAAATATCACAGTGCCATGGTTCAAGATA 79807
Query 23473 AACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTT 23532
| ||||| || || ||||| || || || |||||||||||||| | || || |||||
Sbjct 79808 TATCGCAAAAGCTCCTGGTCTTTTGTTACCACCCTGATCGACGTATCTCGCTGTATTGTT 79867
Query 23533 GTACACTCTTAGCATCGGCACGAGACC 23559
| | ||||||||||| || || | |||
Sbjct 79868 GAAGACTCTTAGCATAGGAACTAAACC 79894
>seq141
Length=295507
Score = 87.8 bits (96), Expect = 2e-12
Identities = 159/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| |||||| ||||||| || || || ||| | || ||||| | ||
Sbjct 197331 ATGCAAATTTTCGTCAAGACTTTGACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCA 197272
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | ||||| | || ||||||||||| | ||||| || ||
Sbjct 197271 GACACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCGCCAGATCAA 197212
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATAA 31371
||| | |||| || || || || || || ||||| | || || | | ||||| ||
Sbjct 197211 CAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGA-TGGCAGAACATTATCTGATTACAA 197153
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| ||||| ||||| || | || |||| | ||| ||||||| ||||
Sbjct 197152 TATCCAAAAGGAATCCACATTACACTTGGTCTTAAGATTGAGGGGTGGTA 197103
Score = 82.4 bits (90), Expect = 7e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| |||||| ||||||| || || || ||| | || ||||| | ||
Sbjct 197103 ATGCAAATTTTCGTCAAGACTTTGACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCA 197044
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | ||||| | || ||||||||||| | || || |||||
Sbjct 197043 GACACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 196984
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATAA 31371
||| | |||| || || || || || || ||||| | || || | | ||||| ||
Sbjct 196983 CAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGA-TGGCAGAACATTATCTGATTACAA 196925
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
|| ||||| ||||| || | || |||| | ||| |||| || |||
Sbjct 196924 TATCCAAAAGGAATCCACATTACACTTGGTCTTAAGATTGAGAGGTGGT 196876
>seq101
Length=125820
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| |||||||||||||| |||||| | || || || || || ||| | || |||||| |
Sbjct 105476 AAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCT 105417
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| | || | ||||| | || ||||| ||||| | || || ||
Sbjct 105416 TCGGACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAAGAAGGTATTCCACCTGAT 105357
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | |||| |||||||| || || || ||||| || || | |||||
Sbjct 105356 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGATTAC 105297
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||||||||||| ||||| ||| | || |||| | ||| | || || |||
Sbjct 105296 AACATTCAAAAGGAATCCACTTTACACTTGGTCTTAAGATTAAGAGGTGGT 105246
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445765324588560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |