Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq103 140 6e-28 seq79 113 9e-20 >seq103 Length=904190 Score = 140 bits (154), Expect = 6e-28 Identities = 340/506 (67%), Gaps = 28/506 (6%) Strand=Plus/Minus Query 101852 ATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAG-CAATAACG----ATTTGG 101906 ||||||||||||| | |||||| | | ||||| ||| | | | ||| |||||| Sbjct 561876 ATCAAGAAGAAGGCCGACTGGGCTTTAAGATGGAT-CAACGACGACGACGCTTTATTTGG 561818 Query 101907 CGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCAT 101966 | || | | ||||| || ||||| || ||||| |||||||| |||||| | || || | Sbjct 561817 TGAAAG-ATTAGTTGCTTTCGCTGCTGTCGAAGGTATCTTCTTCAGTGGTTCGTTTGCCT 561759 Query 101967 CCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCA 102026 ||||||||||| | ||||| || ||| | |||||||| | |||| ||| || || || | Sbjct 561758 CCATTTTCTGGTTGAAGAAGAGAGGTTTGATGCCTGGTTTAACCTTCTCTAACGAATTGA 561699 Query 102027 TTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTG 102086 | | | | ||||||||| | || || ||||| || | |||| | | Sbjct 561698 TATGTCGTGACGAAGGTTTACACACTGATTTTGCGTGTTTATTGTT--------CTCTCA 561647 Query 102087 TTGATACCCCA-TCAAGA-GAAAGGATTCTTGA---AATTGTCACTGAAGCCGTCCGAAT 102141 || | | || | ||| | ||| |||| |||| | |||||||| || || Sbjct 561646 TTTACAAAACAGACCAGATGCTGTTATTGTTGAAAGAATTATTACTGAAGCTGTTGAGAT 561587 Query 102142 TGAACAAGAA---TTTCTC-ACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCA 102197 ||| | ||| ||| || || ||| || || ||| | || |||||||| | Sbjct 561586 CGAAAAGGAATTCTTTGTCGACGCTTTACCAATCT----CCTTATTAGGTATGAACTGTA 561531 Query 102198 AGTTGATGAGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAG 102257 | || ||| | || || |||||||||| || |||| | ||||||||| | || Sbjct 561530 ACTTAATGTGTCAATATGTTGAATTTGTTGCTGATAGATTATTGGTTGCGCTAGGTAACA 561471 Query 102258 AAAAGCACTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATA 102317 ||||| ||| || || || ||||| ||| |||||||| || ||||| | | || Sbjct 561470 AAAAGGTCTACAACGTCACTAACCCATTCGATTTCATGGAAAACATTTCTTTAGCCGGTA 561411 Query 102318 AGACCAACTTTTTTGAAAAGAGAGTC 102343 |||||||||| || |||||||||||| Sbjct 561410 AGACCAACTTCTTCGAAAAGAGAGTC 561385 >seq79 Length=395449 Score = 113 bits (124), Expect = 9e-20 Identities = 318/478 (67%), Gaps = 19/478 (4%) Strand=Plus/Minus Query 35153 GATAGAACTGGAACAGGAACTCTATCCATTTTTGGACC-CCAAA--TGAGGTTCTCTCTT 35209 |||||||||||||| || ||| ||| |||||| || ||| | |||| ||| |||| Sbjct 379343 GATAGAACTGGAACGGGTACTAAATCGCTTTTTGCTCCTCCACAGTTGAGATTCAGTCTT 379284 Query 35210 CGAGACGACACTATTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAA 35269 | ||||||| |||| | || ||||| ||||| |||||| ||||| | || | | Sbjct 379283 TCAAACGACACATTTCCTTTACTTACTACAAAGAAGGTTTTCTCGAGAGCAATTATTCAT 379224 Query 35270 GAACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTGGCCA-AGAAGAAGAT 35328 || | ||||| | || ||| || || |||||| | || | || | | Sbjct 379223 GAGTTGCTATGGTTTGTACAAGGATGTACTGATGC-AAAGAAGTTATCAGATAAAGGGGT 379165 Query 35329 ACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAG 35388 | |||||| | | ||||||||| ||| || |||||| | ||||| || || Sbjct 379164 CAAGATCTGGGAAGGCAATGGGTCGAGGGGATATTTGGATTCAATCGGGTT----GACAG 379109 Query 35389 AGCA----GAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTG 35444 | | || || || |||||||| ||||| || ||||| ||| | |||||||| || | Sbjct 379108 ACCGTCGTGAAGGTGACTTGGGACCAGTATATGGGTTCCAGTGGAGGCATTTTGGAGCAG 379049 Query 35445 AATATGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATAC 35504 |||| | |||| | | |||||| |||| | ||| | ||||| || ||| || Sbjct 379048 AATACAAAGACTGTGATACAGATTATTCTGGCCATGGTTTCGATCAGTTA--CAAGATGT 378991 Query 35505 TA--AAGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCC 35562 || || | ||| | ||| ||| | |||||||| || || ||| | || ||||| || Sbjct 378990 TATCAAAAAATTGAAAACAAACCCATACGATAGAAGAATTATCATGTCAGCGTGGAACCC 378931 Query 35563 TATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGA-CTGCTCAATTTTATGT 35619 ||| || | ||||| | || ||||||||| | |||| ||||||||||| Sbjct 378930 GCCAGATTTTGCCAAAATGGCATTACCCCCATGCCACGTATTCTGC-CAATTTTATGT 378874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989581552944315