Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq103 432 5e-116 seq138 159 5e-34 >seq103 Length=904190 Score = 432 bits (478), Expect = 5e-116 Identities = 1163/1760 (66%), Gaps = 33/1760 (2%) Strand=Plus/Plus Query 64956 ATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTT 65015 || || ||||| | ||||| |||||| ||||| || | || || |||||||| | Sbjct 447908 ATGTGAATATTTAACGATTGTGATTGATCAATGAATGCCGCTCTATCAGCAGCCATATCG 447967 Query 65016 ATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGG 65074 || || |||||| | ||||||||||| || ||||| || | | ||| || || || Sbjct 447968 ATAATATGCTTTTGAGAAATTTCCCAAACGGTCTTATATAAGGCTTTCAAT-TCATCGGG 448026 Query 65075 AAGGTTTG-TAT--TCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATC 65131 || ||| | || | ||||| || || | | ||||| | ||||| || ||||| Sbjct 448027 AATGTTAGGTAAGGTTTGAATAGAACCGTTGTTGGAGATAATGTTGTTCTTCATATCATC 448086 Query 65132 ATTCCATAATTTTCTCTCGGTTAAAACTC-TAAGGAGATGCGGATTAACTACTTGAAATT 65190 ||||| | | || ||| | | ||| || | || || || | |||||||| Sbjct 448087 GTTCCAGATACCTAAATCCACCAAATCACGTAATAAG-TATGGGTTGACAATTTGAAATT 448145 Query 65191 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTAT 65250 | |||| ||| ||||| | || ||||||||| || || ||||| | | | ||||| | Sbjct 448146 CACCAGCCAAAACTCTTCTAGAGTAAATATTTGAAGTGTATGGTTCGAAACATTCATTGT 448205 Query 65251 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 65310 | || |||||||||| ||| || ||||| ||||| || || || ||||| ||||| | Sbjct 448206 TCCCTAAAATTTGAGAAGTGGAAGCAGTTGGCATCGGAGCAACTAATAAGGAGTTTCTGA 448265 Query 65311 GACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAA 65370 ||||| | | | || | || | || ||||| | ||| | || | || Sbjct 448266 TACCGTGTTTGGCCAAGTTTTGCTTCAAAGTATCCCAGTCCCATAATTCAGTTGGCTTTC 448325 Query 65371 CNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGT 65430 ||||| | ||| ||| || || ||| ||||||| | || Sbjct 448326 TTTCCCACAAGTCAAATTGTAAGACACCCTTAGATGCTGGAGAACCTTCATATGTTTGGT 448385 Query 65431 ATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTT 65490 | || ||||| | ||||| | |||| || || | ||||||| |||||||||| Sbjct 448386 ACGGGCCTTCGATTTCAGCCAATTCAATGGATGCTTCCACAGCACCGTGGTAAATGGTTT 448445 Query 65491 CGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGA- 65549 | || || | | |||| |||| ||||| | |||||||| |||| | | | Sbjct 448446 CAAAAATTTGGGTGTTTAATTCTTTAGCTTCTTGAGAGTCAAATGG-TAATCTCAATGCC 448504 Query 65550 ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 65609 ||||| || || ||||| ||||||||||| | | || ||||| | |||| | || ||| Sbjct 448505 ATAAAAGCATCGGCTAAACCTTGAACACCTAAGGCAATTGGTCTGTTTCTCATGTTCGAG 448564 Query 65610 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC---TG 65666 | ||||||||||| || || || ||| || |||||| |||| | || | | Sbjct 448565 TTCCTAGCTTCTGGAACTGGGTAGTAGTTACGGTCGATAATTCTATTTAAGTTACGCGTC 448624 Query 65667 ACAATTACTTTGACCACATCCT-TCAGTTTGAGAAA----ATCAAATCG-----CTCATC 65716 |||| ||| | || || | | | ||| |||| | ||| | | || || Sbjct 448625 ACAAC--CTTAGTA-ACTTCATGTAACTTTTCGAAATCGTACCAACTGGAGGTACTG-TC 448680 Query 65717 TATTACAA-ACATGTTC--AATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGC 65773 | || ||| | ||| | || |||| ||| |||| |||||||| || || |||| || Sbjct 448681 TCTTTCAACAAATGATGGTAAGGCAATAGAAGCCAAGTTACAAACAGCAACTTCATCAGG 448740 Query 65774 ATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTG 65833 | | |||| | |||||| || | ||| | |||||| | ||||| || | Sbjct 448741 CGCAGAGTATTCAACAATCTCACAACACAAGTTAGATGATTTGATGATACCTAAGTTCTT 448800 Query 65834 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAAT 65893 |||||| |||| |||||||| ||||||||||| | || ||||||||||| |||||| | Sbjct 448801 TTGATTGGTCTTCTTGTTACAAGCATCCTTATATAACATAAATGGAGTACCGGTTTCAGT 448860 Query 65894 CTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTT 65953 || | || | ||||| | ||| | | ||||||| || | |||| | | || Sbjct 448861 TTGTGCATCCAAGATCGCGTACCATAATTTTTGAGCCTTAATAACAGATCTACCACGGTT 448920 Query 65954 TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCC 66013 |||| |||||||| | || ||| |||||| || || || | |||| || || Sbjct 448921 TTCTTTTTCGTATTTGGAGTATAATTCTTCGAATTCATCACCATAGACATCTGATAAACC 448980 Query 66014 AGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAA 66073 ||| ||| | ||| | | || | ||| || |||| | | |||| ||||| || Sbjct 448981 TGGAGCTTCGTTTGGAGAGAATAATGTCCAGTCACCGTTTTGTTCAACTCTCTTCATGAA 449040 Query 66074 GAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGT 66133 | |||||||||||| | || ||||||||||| | ||||| ||| || || || Sbjct 449041 TAAATCAGGAATCCATAAGGCCGGGAATAAATCTCTAGCTCTATTTTCTTCTTTGCCGTG 449100 Query 66134 ATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGC 66193 ||||||| | | ||| | ||| | | ||||| |||||| ||||||||||| | || Sbjct 449101 ATTCTTTCTGATATCTATGAAGTCGAATATATCCGCATGCCAAGGTTCCAAGTAAAGAGC 449160 Query 66194 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 66253 | | ||||| | ||||| || || ||||| | || | ||||||||| ||| |||| Sbjct 449161 AAAGGCACCAGGTCTCTTGTTACCACCTTGATCCACATAACGAGCGGTGTTGTTAAAAAC 449220 Query 66254 TCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACT 66313 | | ||||||||| |||||||| || ||||| ||||| |||| ||| || | ||| | Sbjct 449221 ACGAACCATTGGAATGATACCATTAGAAGTACCGTTGGTACCGGCGATGTAAGTACCAGT 449280 Query 66314 TGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 66373 | |||||| || ||| || ||| || || ||||| | || || || || || || Sbjct 449281 GGAACGAATGTTGTGAATGTGTAAACCAATGCCACCTGCACTCTTGGAAATCAAAGCACA 449340 Query 66374 TCGT-TTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAAC 66432 ||| || || || || ||||| || || || |||||| |||| || || |||| Sbjct 449341 -CGTCTTCAAGGTGTCGTAGATACCGTCAATGGAGTCATCCTTCATAGCAACTAAGAAAC 449399 Query 66433 AGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAA 66492 | ||||||||| | | | || || |||||||||||||| || ||| |||| || | Sbjct 449400 AAGAAGACATTTGTGGGCTAGGGGTACCAGCATTAAATAAGGTTGGCGAACCGTGGGTGA 449459 Query 66493 ACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGA 66551 | || ||| || | | ||||||| || | || || ||||| || | || Sbjct 449460 AGTATCTTTGGGACATCATGTTGTACGATTCGACGACTCTCTCGATATCGTCACCG-TGT 449518 Query 66552 ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATT 66611 || || || || || | ||| | || || || |||||||| | | ||| ||| ||| Sbjct 449519 ATACCAACAGCAACTCTCATAATCAAATGTTGTGGTCTTTCGGCAACCTTACCGTTGATT 449578 Query 66612 TTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGT 66671 |||||||||| ||| |||||||||| || || || || |||||||| ||| || || Sbjct 449579 CTCAACAAGTAAGATCTTTCCAAAGTCTTGAATCCGAAGTAGTTGTAATTAAAATCACGG 449638 Query 66672 TCGTAAATAATAACCGAGTT 66691 || | | ||| ||||||| Sbjct 449639 TCAAATACAATTGCCGAGTT 449658 Score = 194 bits (214), Expect = 2e-44 Identities = 580/885 (66%), Gaps = 20/885 (2%) Strand=Plus/Plus Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926 || ||||| |||| || | |||||||| || || || ||||| |||| || || ||| Sbjct 561371 TTCTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCTAAAGAAATGTTT 561430 Query 35927 TCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATC 35986 ||||||||||||||||| || | || || || | ||||| || | || | Sbjct 561431 TCCATGAAATCGAATGGGTTAGTGACGTTGTAGACCTTTTTGTTACCTAGCGCAACCAAT 561490 Query 35987 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TAAG 36045 |||||||| || |||||||| | |||| ||| | | ||| ||||| |||| |||| Sbjct 561491 AATCTATCAGCAACAAATTCAACATATTGACACATTAAGTTACAGTTCATACCTAATAAG 561550 Query 36046 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 36105 | ||| | ||| | || ||||| | ||| || || || || || ||||| Sbjct 561551 GAGAT-TGGTAAAGCGTCGACAAAGAATTCCTTTTCGATCTCAACAGCTTCAGTAATAAT 561609 Query 36106 AGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAA 36165 | || | | || ||| | |||||| |||| ||||| || || Sbjct 561610 TCTTTCAACAATAACAGCATCTGGTCTGTTTTGTAAATGAGAGAACAATAAACACGCAAA 561669 Query 36166 ATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCAT 36225 ||| ||||| ||| ||||| | || || |||||||| || || || | || ||||| Sbjct 561670 ATCAGTGTGTAAACCTTCGTCACGACATATCAATTCGTTAGAGAAGGTTAAACCAGGCAT 561729 Query 36226 TAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTC 36285 | || | ||| || | ||| || ||||| ||||| || ||| ||||| || ||||| Sbjct 561730 CAAACCTCTCTTCTTCAACCAGAAAATGGAGGCAAACGAACCACTGAAGAAGATACCTTC 561789 Query 36286 TACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCACTT 36342 || || || || |||| | ||| || ||| | | || | ||| | ||||| | Sbjct 561790 GACAGCAGCGAAAGCAACTAATCTTTCACCAAATAAAGCGTCGTCGTCGTTGATCCATCT 561849 Query 36343 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATA 36402 | |||||| ||||||||||| || | |||||| || | || ||||||||||| | | Sbjct 561850 TAAAGCCCAGTCGGCCTTCTTCTTGATACAAGGAATGTTATCGATAGCATTAAATAAGAA 561909 Query 36403 GtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA-TACATTTCCGAAT 36461 | ||| || |||||| | || || || || | | || | || | || || | Sbjct 561910 ATCGGCTTCCTTTGGATCTTTGATGTAAGTGTCGATAAGTA-ACGAGTAAGTCTCAGAGT 561968 Query 36462 GAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTT 36521 |||||||||| || ||||| || || |||||||| | || || | | || |||| Sbjct 561969 GAATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCTGGGGTTTGGACTT 562028 Query 36522 CTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 36581 | | | | || ||| | || ||||| || || || |||||| || |||||||||| Sbjct 562029 CAGCAGAGAAATTTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGCAGCAAAAAACG 562088 Query 36582 CCAATACATGTTTT----ATAAAATATTTTTCGTTTGGTGTT-AGTTT---ATTCCAATC 36633 |||| | || | || || ||| |||| ||| |||| | ||| ||||| || Sbjct 562089 CCAAGA----TTCTGGAAATGAAGTATCTTTC-ATTGTTGTTCAATTTTTCGTTCCAGTC 562143 Query 36634 ATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTT 36693 | |||| ||| | || | |||||| | ||||| || || || || || || || Sbjct 562144 TTGTGTATCCTTACCCAAGTCGATTTCTTCGGCGGTCCAGAAGGACGCTTCGGCTTTCTT 562203 Query 36694 ATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738 ||||| | ||| || || || || | ||||| || | ||| || Sbjct 562204 GTACATTTGCCAAATTTCGTGGTACTTGATTGGGAACAAAACGAA 562248 >seq138 Length=177124 Score = 159 bits (176), Expect = 5e-34 Identities = 615/950 (65%), Gaps = 31/950 (3%) Strand=Plus/Plus Query 65558 GTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGA---TTTC 65614 ||| |||| ||||||||||| ||| | |||||||||| | || |||| || || | Sbjct 79169 GTCAGCTAGACCTTGAACACCGATAGCAATAGGTCTATTTTTCATATTCGATTGCCTTGC 79228 Query 65615 AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTAC 65674 | ||| |||||| || | ||| ||| ||||||||||| | |||| | | | ||| Sbjct 79229 ACTTTC---AATAGGGTATTTGGTAACATCAATAATTTTATTCAAATTTTTCGCTAGTAC 79285 Query 65675 TTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCTCAT-CTATTACAAAC------- 65726 | | || | ||||| ||| |||||| || || | || || | Sbjct 79286 TCTAGTTACTGAATGAAGTTTATCAAAGTCAAATT-CTAATTCCTTTCCACTCTTAATGA 79344 Query 65727 ATGTTC--AATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATT 65784 |||| ||||| | || | | ||||||||| || || | | || ||||| Sbjct 79345 ATGTAGGTAATGCTAATGAGCCTAAATTACAAACAGCAGTTTCTTCTGGTGACGAATATT 79404 Query 65785 GTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCT 65844 | |||||| ||||| ||| |||| || ||||||||||| ||||| || | Sbjct 79405 CAACAATCTCACAACAAAGGTTAGATGACTTAATAGTTCCTAAATTCTGTTGGTTTGATT 79464 Query 65845 TTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTA 65904 | ||||| ||||| || || | ||| | ||| |||||||| | ||| |||||| Sbjct 79465 TCAGATTACATGCATCTTTGTACAACATGTACGGACCTCCAGTTTCGGTTTGACATTCTA 79524 Query 65905 TAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT--TC 65962 |||| ||| | | |||| || | || || || ||| || | | || Sbjct 79525 GTATCGAACGCCATAATTTTTGAGCTTTGAC---AGTCTT-TACTGCTTGTCCCGTGTTC 79580 Query 65963 GTATAGTGT--ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACAT 66020 ||| | | ||| | | | ||| |||||||| || || | |||||||| | Sbjct 79581 TCATACTTTTCATAGAGTTCTCTGAAATCGTCTCCATAACAATCGCTTAATCCAGGGGAG 79640 Query 66021 TCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCA 66080 | ||| ||| | | | |||||| ||| || | || |||| | |||||| | ||| Sbjct 79641 TTATCTGGAGAAAATAGCGACCAATCTAAATCTTGTTTTACTCTCTCCATAAATAAATCT 79700 Query 66081 GGAATCCAAAGAGCTATAAA-TAAATCTCTGGTTCTATGTTCCTCGTTTCC-TGTATTCT 66138 || ||||| | | | ||||| |||||| | || ||| ||| || || || || || | Sbjct 79701 GGTATCCATA-ATCCATAAAATAAATCACGGGCTCTCATTTCTTCTTTCCCGTGGTTTTT 79759 Query 66139 TTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAA 66198 || ||| | | || | ||||||| | ||||| ||||| | ||||| || | | Sbjct 79760 CTTCAAGTCCAATACACTGAA-AATATCACAGTGCCATGGTTCAAGATATATCGCAAAAG 79818 Query 66199 CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCA 66258 |||| || | |||||| || |||||||| | |||||| || || || || | ||||| | Sbjct 79819 CTCCTGGTCTTTTGTTACCACCCTGATCGACGTATCTCGCTGTATTGTTGAAGACTCTTA 79878 Query 66259 ACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCAC 66318 ||| |||| | |||| | ||||||||||| | | || || || |||||| ||| Sbjct 79879 GCATAGGAACTAAACCACTTGATGTACCATTTGAACTAGATATGTATGAGCCACTTCCAC 79938 Query 66319 GAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTT 66378 ||| ||| || ||| || |||||||| | ||| || ||||| || || | Sbjct 79939 GAACGTTATGAACATGTAGTCCAATTCCCCCGGATGCTTTTGAAATTAAGGCTGATTTAT 79998 Query 66379 TTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAG 66438 ||| || | ||| || || ||||| |||||| |||| ||||| ||| || || Sbjct 79999 GTAATGTTTTATAAATACCATCTATTGAATCATCTTCCATGGCAAGTAAAAAGCAAGAAG 80058 Query 66439 ACATTTGGTGACGACT-AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 66487 | | | || ||| |||||| | ||||||||| |||||||| || || Sbjct 80059 ATAAATAGT-TGTACTCAGTTCCAGAATTAAATAATGTAGGAGACGCATG 80107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658171212158120