Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq103 432 5e-116
seq138 159 5e-34
>seq103
Length=904190
Score = 432 bits (478), Expect = 5e-116
Identities = 1163/1760 (66%), Gaps = 33/1760 (2%)
Strand=Plus/Plus
Query 64956 ATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTT 65015
|| || ||||| | ||||| |||||| ||||| || | || || |||||||| |
Sbjct 447908 ATGTGAATATTTAACGATTGTGATTGATCAATGAATGCCGCTCTATCAGCAGCCATATCG 447967
Query 65016 ATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGG 65074
|| || |||||| | ||||||||||| || ||||| || | | ||| || || ||
Sbjct 447968 ATAATATGCTTTTGAGAAATTTCCCAAACGGTCTTATATAAGGCTTTCAAT-TCATCGGG 448026
Query 65075 AAGGTTTG-TAT--TCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATC 65131
|| ||| | || | ||||| || || | | ||||| | ||||| || |||||
Sbjct 448027 AATGTTAGGTAAGGTTTGAATAGAACCGTTGTTGGAGATAATGTTGTTCTTCATATCATC 448086
Query 65132 ATTCCATAATTTTCTCTCGGTTAAAACTC-TAAGGAGATGCGGATTAACTACTTGAAATT 65190
||||| | | || ||| | | ||| || | || || || | ||||||||
Sbjct 448087 GTTCCAGATACCTAAATCCACCAAATCACGTAATAAG-TATGGGTTGACAATTTGAAATT 448145
Query 65191 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTAT 65250
| |||| ||| ||||| | || ||||||||| || || ||||| | | | ||||| |
Sbjct 448146 CACCAGCCAAAACTCTTCTAGAGTAAATATTTGAAGTGTATGGTTCGAAACATTCATTGT 448205
Query 65251 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 65310
| || |||||||||| ||| || ||||| ||||| || || || ||||| ||||| |
Sbjct 448206 TCCCTAAAATTTGAGAAGTGGAAGCAGTTGGCATCGGAGCAACTAATAAGGAGTTTCTGA 448265
Query 65311 GACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAA 65370
||||| | | | || | || | || ||||| | ||| | || | ||
Sbjct 448266 TACCGTGTTTGGCCAAGTTTTGCTTCAAAGTATCCCAGTCCCATAATTCAGTTGGCTTTC 448325
Query 65371 CNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGT 65430
||||| | ||| ||| || || ||| ||||||| | ||
Sbjct 448326 TTTCCCACAAGTCAAATTGTAAGACACCCTTAGATGCTGGAGAACCTTCATATGTTTGGT 448385
Query 65431 ATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTT 65490
| || ||||| | ||||| | |||| || || | ||||||| ||||||||||
Sbjct 448386 ACGGGCCTTCGATTTCAGCCAATTCAATGGATGCTTCCACAGCACCGTGGTAAATGGTTT 448445
Query 65491 CGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGA- 65549
| || || | | |||| |||| ||||| | |||||||| |||| | | |
Sbjct 448446 CAAAAATTTGGGTGTTTAATTCTTTAGCTTCTTGAGAGTCAAATGG-TAATCTCAATGCC 448504
Query 65550 ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 65609
||||| || || ||||| ||||||||||| | | || ||||| | |||| | || |||
Sbjct 448505 ATAAAAGCATCGGCTAAACCTTGAACACCTAAGGCAATTGGTCTGTTTCTCATGTTCGAG 448564
Query 65610 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC---TG 65666
| ||||||||||| || || || ||| || |||||| |||| | || | |
Sbjct 448565 TTCCTAGCTTCTGGAACTGGGTAGTAGTTACGGTCGATAATTCTATTTAAGTTACGCGTC 448624
Query 65667 ACAATTACTTTGACCACATCCT-TCAGTTTGAGAAA----ATCAAATCG-----CTCATC 65716
|||| ||| | || || | | | ||| |||| | ||| | | || ||
Sbjct 448625 ACAAC--CTTAGTA-ACTTCATGTAACTTTTCGAAATCGTACCAACTGGAGGTACTG-TC 448680
Query 65717 TATTACAA-ACATGTTC--AATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGC 65773
| || ||| | ||| | || |||| ||| |||| |||||||| || || |||| ||
Sbjct 448681 TCTTTCAACAAATGATGGTAAGGCAATAGAAGCCAAGTTACAAACAGCAACTTCATCAGG 448740
Query 65774 ATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTG 65833
| | |||| | |||||| || | ||| | |||||| | ||||| || |
Sbjct 448741 CGCAGAGTATTCAACAATCTCACAACACAAGTTAGATGATTTGATGATACCTAAGTTCTT 448800
Query 65834 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAAT 65893
|||||| |||| |||||||| ||||||||||| | || ||||||||||| |||||| |
Sbjct 448801 TTGATTGGTCTTCTTGTTACAAGCATCCTTATATAACATAAATGGAGTACCGGTTTCAGT 448860
Query 65894 CTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTT 65953
|| | || | ||||| | ||| | | ||||||| || | |||| | | ||
Sbjct 448861 TTGTGCATCCAAGATCGCGTACCATAATTTTTGAGCCTTAATAACAGATCTACCACGGTT 448920
Query 65954 TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCC 66013
|||| |||||||| | || ||| |||||| || || || | |||| || ||
Sbjct 448921 TTCTTTTTCGTATTTGGAGTATAATTCTTCGAATTCATCACCATAGACATCTGATAAACC 448980
Query 66014 AGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAA 66073
||| ||| | ||| | | || | ||| || |||| | | |||| ||||| ||
Sbjct 448981 TGGAGCTTCGTTTGGAGAGAATAATGTCCAGTCACCGTTTTGTTCAACTCTCTTCATGAA 449040
Query 66074 GAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGT 66133
| |||||||||||| | || ||||||||||| | ||||| ||| || || ||
Sbjct 449041 TAAATCAGGAATCCATAAGGCCGGGAATAAATCTCTAGCTCTATTTTCTTCTTTGCCGTG 449100
Query 66134 ATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGC 66193
||||||| | | ||| | ||| | | ||||| |||||| ||||||||||| | ||
Sbjct 449101 ATTCTTTCTGATATCTATGAAGTCGAATATATCCGCATGCCAAGGTTCCAAGTAAAGAGC 449160
Query 66194 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 66253
| | ||||| | ||||| || || ||||| | || | ||||||||| ||| ||||
Sbjct 449161 AAAGGCACCAGGTCTCTTGTTACCACCTTGATCCACATAACGAGCGGTGTTGTTAAAAAC 449220
Query 66254 TCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACT 66313
| | ||||||||| |||||||| || ||||| ||||| |||| ||| || | ||| |
Sbjct 449221 ACGAACCATTGGAATGATACCATTAGAAGTACCGTTGGTACCGGCGATGTAAGTACCAGT 449280
Query 66314 TGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 66373
| |||||| || ||| || ||| || || ||||| | || || || || || ||
Sbjct 449281 GGAACGAATGTTGTGAATGTGTAAACCAATGCCACCTGCACTCTTGGAAATCAAAGCACA 449340
Query 66374 TCGT-TTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAAC 66432
||| || || || || ||||| || || || |||||| |||| || || ||||
Sbjct 449341 -CGTCTTCAAGGTGTCGTAGATACCGTCAATGGAGTCATCCTTCATAGCAACTAAGAAAC 449399
Query 66433 AGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAA 66492
| ||||||||| | | | || || |||||||||||||| || ||| |||| || |
Sbjct 449400 AAGAAGACATTTGTGGGCTAGGGGTACCAGCATTAAATAAGGTTGGCGAACCGTGGGTGA 449459
Query 66493 ACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGA 66551
| || ||| || | | ||||||| || | || || ||||| || | ||
Sbjct 449460 AGTATCTTTGGGACATCATGTTGTACGATTCGACGACTCTCTCGATATCGTCACCG-TGT 449518
Query 66552 ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATT 66611
|| || || || || | ||| | || || || |||||||| | | ||| ||| |||
Sbjct 449519 ATACCAACAGCAACTCTCATAATCAAATGTTGTGGTCTTTCGGCAACCTTACCGTTGATT 449578
Query 66612 TTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGT 66671
|||||||||| ||| |||||||||| || || || || |||||||| ||| || ||
Sbjct 449579 CTCAACAAGTAAGATCTTTCCAAAGTCTTGAATCCGAAGTAGTTGTAATTAAAATCACGG 449638
Query 66672 TCGTAAATAATAACCGAGTT 66691
|| | | ||| |||||||
Sbjct 449639 TCAAATACAATTGCCGAGTT 449658
Score = 194 bits (214), Expect = 2e-44
Identities = 580/885 (66%), Gaps = 20/885 (2%)
Strand=Plus/Plus
Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926
|| ||||| |||| || | |||||||| || || || ||||| |||| || || |||
Sbjct 561371 TTCTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCTAAAGAAATGTTT 561430
Query 35927 TCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATC 35986
||||||||||||||||| || | || || || | ||||| || | || |
Sbjct 561431 TCCATGAAATCGAATGGGTTAGTGACGTTGTAGACCTTTTTGTTACCTAGCGCAACCAAT 561490
Query 35987 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TAAG 36045
|||||||| || |||||||| | |||| ||| | | ||| ||||| |||| ||||
Sbjct 561491 AATCTATCAGCAACAAATTCAACATATTGACACATTAAGTTACAGTTCATACCTAATAAG 561550
Query 36046 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 36105
| ||| | ||| | || ||||| | ||| || || || || || |||||
Sbjct 561551 GAGAT-TGGTAAAGCGTCGACAAAGAATTCCTTTTCGATCTCAACAGCTTCAGTAATAAT 561609
Query 36106 AGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAA 36165
| || | | || ||| | |||||| |||| ||||| || ||
Sbjct 561610 TCTTTCAACAATAACAGCATCTGGTCTGTTTTGTAAATGAGAGAACAATAAACACGCAAA 561669
Query 36166 ATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCAT 36225
||| ||||| ||| ||||| | || || |||||||| || || || | || |||||
Sbjct 561670 ATCAGTGTGTAAACCTTCGTCACGACATATCAATTCGTTAGAGAAGGTTAAACCAGGCAT 561729
Query 36226 TAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTC 36285
| || | ||| || | ||| || ||||| ||||| || ||| ||||| || |||||
Sbjct 561730 CAAACCTCTCTTCTTCAACCAGAAAATGGAGGCAAACGAACCACTGAAGAAGATACCTTC 561789
Query 36286 TACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCACTT 36342
|| || || || |||| | ||| || ||| | | || | ||| | ||||| |
Sbjct 561790 GACAGCAGCGAAAGCAACTAATCTTTCACCAAATAAAGCGTCGTCGTCGTTGATCCATCT 561849
Query 36343 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATA 36402
| |||||| ||||||||||| || | |||||| || | || ||||||||||| | |
Sbjct 561850 TAAAGCCCAGTCGGCCTTCTTCTTGATACAAGGAATGTTATCGATAGCATTAAATAAGAA 561909
Query 36403 GtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA-TACATTTCCGAAT 36461
| ||| || |||||| | || || || || | | || | || | || || |
Sbjct 561910 ATCGGCTTCCTTTGGATCTTTGATGTAAGTGTCGATAAGTA-ACGAGTAAGTCTCAGAGT 561968
Query 36462 GAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTT 36521
|||||||||| || ||||| || || |||||||| | || || | | || ||||
Sbjct 561969 GAATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCTGGGGTTTGGACTT 562028
Query 36522 CTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 36581
| | | | || ||| | || ||||| || || || |||||| || ||||||||||
Sbjct 562029 CAGCAGAGAAATTTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGCAGCAAAAAACG 562088
Query 36582 CCAATACATGTTTT----ATAAAATATTTTTCGTTTGGTGTT-AGTTT---ATTCCAATC 36633
|||| | || | || || ||| |||| ||| |||| | ||| ||||| ||
Sbjct 562089 CCAAGA----TTCTGGAAATGAAGTATCTTTC-ATTGTTGTTCAATTTTTCGTTCCAGTC 562143
Query 36634 ATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTT 36693
| |||| ||| | || | |||||| | ||||| || || || || || || ||
Sbjct 562144 TTGTGTATCCTTACCCAAGTCGATTTCTTCGGCGGTCCAGAAGGACGCTTCGGCTTTCTT 562203
Query 36694 ATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738
||||| | ||| || || || || | ||||| || | ||| ||
Sbjct 562204 GTACATTTGCCAAATTTCGTGGTACTTGATTGGGAACAAAACGAA 562248
>seq138
Length=177124
Score = 159 bits (176), Expect = 5e-34
Identities = 615/950 (65%), Gaps = 31/950 (3%)
Strand=Plus/Plus
Query 65558 GTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGA---TTTC 65614
||| |||| ||||||||||| ||| | |||||||||| | || |||| || || |
Sbjct 79169 GTCAGCTAGACCTTGAACACCGATAGCAATAGGTCTATTTTTCATATTCGATTGCCTTGC 79228
Query 65615 AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTAC 65674
| ||| |||||| || | ||| ||| ||||||||||| | |||| | | | |||
Sbjct 79229 ACTTTC---AATAGGGTATTTGGTAACATCAATAATTTTATTCAAATTTTTCGCTAGTAC 79285
Query 65675 TTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCTCAT-CTATTACAAAC------- 65726
| | || | ||||| ||| |||||| || || | || || |
Sbjct 79286 TCTAGTTACTGAATGAAGTTTATCAAAGTCAAATT-CTAATTCCTTTCCACTCTTAATGA 79344
Query 65727 ATGTTC--AATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATT 65784
|||| ||||| | || | | ||||||||| || || | | || |||||
Sbjct 79345 ATGTAGGTAATGCTAATGAGCCTAAATTACAAACAGCAGTTTCTTCTGGTGACGAATATT 79404
Query 65785 GTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCT 65844
| |||||| ||||| ||| |||| || ||||||||||| ||||| || |
Sbjct 79405 CAACAATCTCACAACAAAGGTTAGATGACTTAATAGTTCCTAAATTCTGTTGGTTTGATT 79464
Query 65845 TTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTA 65904
| ||||| ||||| || || | ||| | ||| |||||||| | ||| ||||||
Sbjct 79465 TCAGATTACATGCATCTTTGTACAACATGTACGGACCTCCAGTTTCGGTTTGACATTCTA 79524
Query 65905 TAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT--TC 65962
|||| ||| | | |||| || | || || || ||| || | | ||
Sbjct 79525 GTATCGAACGCCATAATTTTTGAGCTTTGAC---AGTCTT-TACTGCTTGTCCCGTGTTC 79580
Query 65963 GTATAGTGT--ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACAT 66020
||| | | ||| | | | ||| |||||||| || || | |||||||| |
Sbjct 79581 TCATACTTTTCATAGAGTTCTCTGAAATCGTCTCCATAACAATCGCTTAATCCAGGGGAG 79640
Query 66021 TCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCA 66080
| ||| ||| | | | |||||| ||| || | || |||| | |||||| | |||
Sbjct 79641 TTATCTGGAGAAAATAGCGACCAATCTAAATCTTGTTTTACTCTCTCCATAAATAAATCT 79700
Query 66081 GGAATCCAAAGAGCTATAAA-TAAATCTCTGGTTCTATGTTCCTCGTTTCC-TGTATTCT 66138
|| ||||| | | | ||||| |||||| | || ||| ||| || || || || || |
Sbjct 79701 GGTATCCATA-ATCCATAAAATAAATCACGGGCTCTCATTTCTTCTTTCCCGTGGTTTTT 79759
Query 66139 TTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAA 66198
|| ||| | | || | ||||||| | ||||| ||||| | ||||| || | |
Sbjct 79760 CTTCAAGTCCAATACACTGAA-AATATCACAGTGCCATGGTTCAAGATATATCGCAAAAG 79818
Query 66199 CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCA 66258
|||| || | |||||| || |||||||| | |||||| || || || || | ||||| |
Sbjct 79819 CTCCTGGTCTTTTGTTACCACCCTGATCGACGTATCTCGCTGTATTGTTGAAGACTCTTA 79878
Query 66259 ACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCAC 66318
||| |||| | |||| | ||||||||||| | | || || || |||||| |||
Sbjct 79879 GCATAGGAACTAAACCACTTGATGTACCATTTGAACTAGATATGTATGAGCCACTTCCAC 79938
Query 66319 GAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTT 66378
||| ||| || ||| || |||||||| | ||| || ||||| || || |
Sbjct 79939 GAACGTTATGAACATGTAGTCCAATTCCCCCGGATGCTTTTGAAATTAAGGCTGATTTAT 79998
Query 66379 TTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAG 66438
||| || | ||| || || ||||| |||||| |||| ||||| ||| || ||
Sbjct 79999 GTAATGTTTTATAAATACCATCTATTGAATCATCTTCCATGGCAAGTAAAAAGCAAGAAG 80058
Query 66439 ACATTTGGTGACGACT-AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 66487
| | | || ||| |||||| | ||||||||| |||||||| || ||
Sbjct 80059 ATAAATAGT-TGTACTCAGTTCCAGAATTAAATAATGTAGGAGACGCATG 80107
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658171212158120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |