Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq103 268 9e-67 >seq103 Length=904190 Score = 268 bits (296), Expect = 9e-67 Identities = 584/859 (68%), Gaps = 19/859 (2%) Strand=Plus/Plus Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640 || || || ||||| ||||| ||||| |||||||| || ||||| | | || || ||| Sbjct 561371 TTCTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCTAAAGAAATGTTT 561430 Query 13641 TCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATCACAACCTAGTTCTAATAG 13699 ||||| ||||| ||||| || | |||| | | || || | |||||| | | | Sbjct 561431 TCCATGAAATCGAATGGGTT-AGTGACGTTGTAGACCTTTTTGTTACCTAGCGCAACCAA 561489 Query 13700 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13759 |||||||||||||| ||| |||| ||||||| ||||||| | ||| |||||||||| || Sbjct 561490 TAATCTATCAGCAACAAATTCAACATATTGACACATTAAGTTACAGTTCATACCTAATAA 561549 Query 13760 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAAT 13819 | || | | | || ||||| ||||| || ||||| || | ||||| Sbjct 561550 GGAGATTGGTAAAGCGTCGACAAAGAATTCCTTTTCGATCTCAACAGCTTCAGTAATAAT 561609 Query 13820 AATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 13879 || || ||| || | || | || || ||| || | |||||||||||| Sbjct 561610 TCTTTCAACAATAACAGCATCTGGTCTGTTTTGTAAATGAGAGAACAATAAACACGCAAA 561669 Query 13880 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 13939 |||| || | || || || | || || | |||||| || || ||||| || ||||| Sbjct 561670 ATCAGTGTGTAAACCTTCGTCACGACATATCAATTCGTTAGAGAAGGTTAAACCAGGCAT 561729 Query 13940 CAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTC 13999 ||| |||| || || ||||| || || | ||||| || || ||||| || || || Sbjct 561730 CAAACCTCTCTTCTTCAACCAGAAAATGGAGGCAAACGAACCACTGAAGAAGATACCTTC 561789 Query 14000 AACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGAT-ATCCATT 14058 || ||||| || || | ||||| ||| ||||| | || | | | ||| | |||||| Sbjct 561790 GACAGCAGCGAAAGCAACTAATCTTTCACCAAATAAAGCGTCGTCG-TCGTTGATCCATC 561848 Query 14059 TTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAAT 14118 || |||||| || | || || || ||| || || | || |||||||||||||| Sbjct 561849 TTAAAGCCCAGTCGGCCTTCTTCTTGATACAAGGAATGTTATCGATAGCATTAAATAAGA 561908 Query 14119 ATTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGA 14176 | || |||| |||| | ||| ||||| || || |||||||| || | ||||| Sbjct 561909 AATCGGCTTC-CTTTGGATCTT-TGATGTAAGTGTCGATAAGTAACGAGTAAGTCTCAGA 561966 Query 14177 GTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTAC 14236 ||| ||||||||||| || || |||||||| || || | ||||| | ||| || Sbjct 561967 GTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCTGGGGTTTGGAC 562026 Query 14237 TTCCG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAA 14295 ||| | || |||| |||| |||| ||||| || || ||||| ||| ||| ||||||| Sbjct 562027 TTCAGCAGAGAAAT-TTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGCAGCAAAAA 562085 Query 14296 ATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTG---AGTTTT---TTCCAAT 14349 | ||||| || | ||| |||||| || |||||||||| | |||| ||||| | Sbjct 562086 ACGCCAAGATTCTGGAAATGAAGTAT--CT-TTCATTGTTGTTCAATTTTTCGTTCCAGT 562142 Query 14350 CGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTT 14409 | | ||||||| | || | ||| || | ||||| || || | ||||| | Sbjct 562143 CTTGTGTATCCTTACCCAAGTCGATTTCTTCGGCGGTCCAGAAGGACGCTTCGGCTTTCT 562202 Query 14410 TATACATTACCCATATTTC 14428 | |||||| ||| ||||| Sbjct 562203 TGTACATTTGCCAAATTTC 562221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479726842656200