Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq103 262 4e-65 >seq103 Length=904190 Score = 262 bits (290), Expect = 4e-65 Identities = 585/861 (68%), Gaps = 23/861 (3%) Strand=Plus/Plus Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428 || || || ||||| ||||| ||||| || ||||| || ||||| | | || || ||| Sbjct 561371 TTCTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCTAAAGAAATGTTT 561430 Query 13429 TCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAA 13487 ||||| ||||||||||| || || ||| | | || || | |||||| | | || Sbjct 561431 TCCATGAAATCGAATGGGTTAGT-GACGTTGTAGACCTTTTTGTTACCTAGCGCAACCAA 561489 Query 13488 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13547 |||||||||||||| ||| |||| ||||||| ||||||| | ||| |||||||||| || Sbjct 561490 TAATCTATCAGCAACAAATTCAACATATTGACACATTAAGTTACAGTTCATACCTAATAA 561549 Query 13548 TTTTACAGGAATTATATTAGTTAAA-AATTCTTTTTCTATAGACACAGCCTCGTTTATAA 13606 | || | | | | ||| ||||| ||||| || ||||| || | |||| Sbjct 561550 GGAGATTGGTAA-AGCGTCGACAAAGAATTCCTTTTCGATCTCAACAGCTTCAGTAATAA 561608 Query 13607 TAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAA 13666 | | | || ||| || | || | || || ||| || | ||||||||||| Sbjct 561609 TTCTTTCAACAATAACAGCATCTGGTCTGTTTTGTAAATGAGAGAACAATAAACACGCAA 561668 Query 13667 AATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCA 13726 ||||| || | || || || | || || | |||||| || || ||||| || |||| Sbjct 561669 AATCAGTGTGTAAACCTTCGTCACGACATATCAATTCGTTAGAGAAGGTTAAACCAGGCA 561728 Query 13727 TCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCT 13786 |||| |||| || || ||||| || || | || || || || ||||| || || | Sbjct 561729 TCAAACCTCTCTTCTTCAACCAGAAAATGGAGGCAAACGAACCACTGAAGAAGATACCTT 561788 Query 13787 CAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT--TTGATATCCA 13844 | || ||||| || || | || || ||| ||||| | || | | || ||| ||||| Sbjct 561789 CGACAGCAGCGAAAGCAACTAATCTTTCACCAAATAAAGCGTCGTCGTCGTTG--ATCCA 561846 Query 13845 TTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAA 13904 | || |||||| || | || || || ||| || || | ||||| ||||| ||||| Sbjct 561847 TCTTAAAGCCCAGTCGGCCTTCTTCTTGATACAAGGAATGTTATCGATAGCATTAAATAA 561906 Query 13905 ATGTTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCA 13962 || |||| |||| | ||| ||||| || || |||||||| || | ||| Sbjct 561907 GAAATCGGCTTC-CTTTGGATCTT-TGATGTAAGTGTCGATAAGTAACGAGTAAGTCTCA 561964 Query 13963 GAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGT 14022 ||||| |||||||| || || || |||||||| ||||| | ||||||| ||| Sbjct 561965 GAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCTGGGGTTTGG 562024 Query 14023 ACCTCCG-AGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAA 14081 || || | || |||| |||| |||||||||| || |||||||| ||| ||| ||||| Sbjct 562025 ACTTCAGCAGAGAAAT-TTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGCAGCAAA 562083 Query 14082 AAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTG---AGTTTT---TTCCA 14135 ||| ||||| || | ||| |||||| || |||||||||| | |||| ||||| Sbjct 562084 AAACGCCAAGATTCTGGAAATGAAGTAT--CT-TTCATTGTTGTTCAATTTTTCGTTCCA 562140 Query 14136 ATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTT 14195 || | ||||||| | || | ||| || | ||||| || || | ||||| Sbjct 562141 GTCTTGTGTATCCTTACCCAAGTCGATTTCTTCGGCGGTCCAGAAGGACGCTTCGGCTTT 562200 Query 14196 TTTATACATTACCCATATTTC 14216 || |||||| ||| ||||| Sbjct 562201 CTTGTACATTTGCCAAATTTC 562221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478587645404520