Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq103 262 4e-65
>seq103
Length=904190
Score = 262 bits (290), Expect = 4e-65
Identities = 585/861 (68%), Gaps = 23/861 (3%)
Strand=Plus/Plus
Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428
|| || || ||||| ||||| ||||| || ||||| || ||||| | | || || |||
Sbjct 561371 TTCTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCTAAAGAAATGTTT 561430
Query 13429 TCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAA 13487
||||| ||||||||||| || || ||| | | || || | |||||| | | ||
Sbjct 561431 TCCATGAAATCGAATGGGTTAGT-GACGTTGTAGACCTTTTTGTTACCTAGCGCAACCAA 561489
Query 13488 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13547
|||||||||||||| ||| |||| ||||||| ||||||| | ||| |||||||||| ||
Sbjct 561490 TAATCTATCAGCAACAAATTCAACATATTGACACATTAAGTTACAGTTCATACCTAATAA 561549
Query 13548 TTTTACAGGAATTATATTAGTTAAA-AATTCTTTTTCTATAGACACAGCCTCGTTTATAA 13606
| || | | | | ||| ||||| ||||| || ||||| || | ||||
Sbjct 561550 GGAGATTGGTAA-AGCGTCGACAAAGAATTCCTTTTCGATCTCAACAGCTTCAGTAATAA 561608
Query 13607 TAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAA 13666
| | | || ||| || | || | || || ||| || | |||||||||||
Sbjct 561609 TTCTTTCAACAATAACAGCATCTGGTCTGTTTTGTAAATGAGAGAACAATAAACACGCAA 561668
Query 13667 AATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCA 13726
||||| || | || || || | || || | |||||| || || ||||| || ||||
Sbjct 561669 AATCAGTGTGTAAACCTTCGTCACGACATATCAATTCGTTAGAGAAGGTTAAACCAGGCA 561728
Query 13727 TCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCT 13786
|||| |||| || || ||||| || || | || || || || ||||| || || |
Sbjct 561729 TCAAACCTCTCTTCTTCAACCAGAAAATGGAGGCAAACGAACCACTGAAGAAGATACCTT 561788
Query 13787 CAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT--TTGATATCCA 13844
| || ||||| || || | || || ||| ||||| | || | | || ||| |||||
Sbjct 561789 CGACAGCAGCGAAAGCAACTAATCTTTCACCAAATAAAGCGTCGTCGTCGTTG--ATCCA 561846
Query 13845 TTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAA 13904
| || |||||| || | || || || ||| || || | ||||| ||||| |||||
Sbjct 561847 TCTTAAAGCCCAGTCGGCCTTCTTCTTGATACAAGGAATGTTATCGATAGCATTAAATAA 561906
Query 13905 ATGTTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCA 13962
|| |||| |||| | ||| ||||| || || |||||||| || | |||
Sbjct 561907 GAAATCGGCTTC-CTTTGGATCTT-TGATGTAAGTGTCGATAAGTAACGAGTAAGTCTCA 561964
Query 13963 GAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGT 14022
||||| |||||||| || || || |||||||| ||||| | ||||||| |||
Sbjct 561965 GAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCTGGGGTTTGG 562024
Query 14023 ACCTCCG-AGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAA 14081
|| || | || |||| |||| |||||||||| || |||||||| ||| ||| |||||
Sbjct 562025 ACTTCAGCAGAGAAAT-TTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGCAGCAAA 562083
Query 14082 AAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTG---AGTTTT---TTCCA 14135
||| ||||| || | ||| |||||| || |||||||||| | |||| |||||
Sbjct 562084 AAACGCCAAGATTCTGGAAATGAAGTAT--CT-TTCATTGTTGTTCAATTTTTCGTTCCA 562140
Query 14136 ATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTT 14195
|| | ||||||| | || | ||| || | ||||| || || | |||||
Sbjct 562141 GTCTTGTGTATCCTTACCCAAGTCGATTTCTTCGGCGGTCCAGAAGGACGCTTCGGCTTT 562200
Query 14196 TTTATACATTACCCATATTTC 14216
|| |||||| ||| |||||
Sbjct 562201 CTTGTACATTTGCCAAATTTC 562221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478587645404520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |