Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq103 399 3e-106 >seq103 Length=904190 Score = 399 bits (442), Expect = 3e-106 Identities = 1299/1996 (65%), Gaps = 43/1996 (2%) Strand=Plus/Plus Query 70918 ATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTT 70977 ||||||||||| | ||| || |||||| ||||| || | || || |||||||| | Sbjct 447908 ATGTGAATATTTAACGATTGTGATTGATCAATGAATGCCGCTCTATCAGCAGCCATATCG 447967 Query 70978 ATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGG 71036 || || |||||| | ||||||||||| || ||||| || | | ||| || || || Sbjct 447968 ATAATATGCTTTTGAGAAATTTCCCAAACGGTCTTATATAAGGCTTTCAAT-TCATCGGG 448026 Query 71037 AAGGTTTG-TAT--TCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTC 71093 || ||| | || | ||||| || || | | ||||| | || || || || || Sbjct 448027 AATGTTAGGTAAGGTTTGAATAGAACCGTTGTTGGAGATAATGTTGTTCTTCATATCATC 448086 Query 71094 ATTCCATAATTTTCTCTCGGTTAAAACTC-TAAGGAGATGAGGATTAACTACTTGAAATT 71152 ||||| | | || ||| | | ||| || | || || || | |||||||| Sbjct 448087 GTTCCAGATACCTAAATCCACCAAATCACGTAATAAG-TATGGGTTGACAATTTGAAATT 448145 Query 71153 CTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTAT 71212 | |||| ||| ||||| | || ||||||||| || || ||||| | | ||||| | Sbjct 448146 CACCAGCCAAAACTCTTCTAGAGTAAATATTTGAAGTGTATGGTTCGAAACATTCATTGT 448205 Query 71213 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAA 71272 | || |||||||||| ||| || ||||| ||||| || || || |||| ||||| | Sbjct 448206 TCCCTAAAATTTGAGAAGTGGAAGCAGTTGGCATCGGAGCAACTAATAAGGAGTTTCTGA 448265 Query 71273 GACCATGTGATCGG--ATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGGTAC 71330 ||| ||| | || | || | || | || ||||| | ||| | || | ||| Sbjct 448266 TACCGTGT--TTGGCCAAGTTTTGCTTCAAAGTATCCCAGTCCCATAATTCAGTTGGCTT 448323 Query 71331 AACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATATGTATC 71390 | || ||| || || ||| ||||||| | Sbjct 448324 TCTTTCCCACAAGTCAAATTGTAAGACACCCTTAGATGCTGGAGAACCTTCATATGTTTG 448383 Query 71391 GTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGT 71450 ||| || ||||| |||| || | |||| || || | || || | |||||||| Sbjct 448384 GTACGGGCCTTCGATTTCAGCCAATTCAATGGATGCTTCCACAGCACCGTGGTAAATGGT 448443 Query 71451 TTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAG 71510 ||| ||||| | | || | |||| ||||| | |||||||| |||| | | | Sbjct 448444 TTCAAAAATTTGGGTGTTTAATTCTTTAGCTTCTTGAGAGTCAAATGG-TAATCTCAATG 448502 Query 71511 A-ATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAG 71569 ||||| || || ||||| |||||||| || | | || ||||||| |||| | || | Sbjct 448503 CCATAAAAGCATCGGCTAAACCTTGAACACCTAAGGCAATTGGTCTGTTTCTCATGTTCG 448562 Query 71570 AAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGA 71629 | | ||||||||||| || || || ||| || |||||| |||| | || | Sbjct 448563 AGTTCCTAGCTTCTGGAACTGGGTAGTAGTTACGGTCGATAATTCTATTTAAGTTACGCG 448622 Query 71630 CTATTACTTTGACCACATCCTTTAG-TTTGAGAAA----ATCAAATC----TCCCATCTA 71680 | || || || || | || ||| |||| | ||| | | | ||| Sbjct 448623 TCACAACCTTAGTAACTTCATGTAACTTTTCGAAATCGTACCAACTGGAGGTACTGTCTC 448682 Query 71681 TTACAA-ACACGTTC--AAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCAT 71737 || ||| | | | | ||||||| ||| |||| |||||||| || || |||| || Sbjct 448683 TTTCAACAAATGATGGTAAGGCAATAGAAGCCAAGTTACAAACAGCAACTTCATCAGGCG 448742 Query 71738 CGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTT 71797 | | |||| | ||| ||| || | ||| | |||||| | ||||| || | || Sbjct 448743 CAGAGTATTCAACAATCTCACAACACAAGTTAGATGATTTGATGATACCTAAGTTCTTTT 448802 Query 71798 GATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCT 71857 |||| |||| |||||||| ||||||||||| | ||||| |||||||| |||||| | | Sbjct 448803 GATTGGTCTTCTTGTTACAAGCATCCTTATATAACATAAATGGAGTACCGGTTTCAGTTT 448862 Query 71858 GAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAT-TCTTGTATCTCTTT 71916 | | || | ||||| | ||| | | ||||||| || | | ||| | | ||| Sbjct 448863 GTGCATCCAAGATCGCGTACCATAATTTTTGAGCCTTAATAACAGATCTACCA-CGGTTT 448921 Query 71917 TCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCA 71976 ||| ||||||||| | |||||| |||||| || || || | ||| ||| || Sbjct 448922 TCTTTTTCGTATTTGGAGTATAATTCTTCGAATTCATCACCATAGACATCTGATAAACCT 448981 Query 71977 GGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAG 72036 ||| ||| || ||| | | |||| ||| || || | | | |||| ||||| || Sbjct 448982 GGAGCTTCGTTTGGAGAGAATAATGTCCAGTCACCGTTTTGTTCAACTCTCTTCATGAAT 449041 Query 72037 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTA 72096 | |||||||||||| | || |||| |||||| | ||||| || || || || | Sbjct 449042 AAATCAGGAATCCATAAGGCCGGGAATAAATCTCTAGCTCTATTTTCTTCTTTGCCGTGA 449101 Query 72097 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 72156 |||||| | | ||| | ||| | | ||||| | |||||| ||||||||||| | || Sbjct 449102 TTCTTTCTGATATCTATGAAGTCGAATATATCCGCATGCCAAGGTTCCAAGTAAAGAGCA 449161 Query 72157 ATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 72216 | | || || | ||||| || || ||||| | || | ||||||||| ||| |||| Sbjct 449162 AAGGCACCAGGTCTCTTGTTACCACCTTGATCCACATAACGAGCGGTGTTGTTAAAAACA 449221 Query 72217 CTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTG 72276 | | ||||||||| |||||||| || | ||| ||||| |||| ||| || | ||| || Sbjct 449222 CGAACCATTGGAATGATACCATTAGAAGTACCGTTGGTACCGGCGATGTAAGTACCAGTG 449281 Query 72277 GCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCAT 72336 | |||||| ||| ||| || ||| || || ||||| | || || || || || || Sbjct 449282 GAACGAATGTTGTGAATGTGTAAACCAATGCCACCTGCACTCTTGGAAATCAAAGCACA- 449340 Query 72337 CGT-TTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACA 72395 ||| || || || || ||||| || || || |||||| |||| || || ||||| Sbjct 449341 CGTCTTCAAGGTGTCGTAGATACCGTCAATGGAGTCATCCTTCATAGCAACTAAGAAACA 449400 Query 72396 GCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAA 72455 ||||||||| | | | || || |||||||||||||| || ||| |||| || || Sbjct 449401 AGAAGACATTTGTGGGCTAGGGGTACCAGCATTAAATAAGGTTGGCGAACCGTGGGTGAA 449460 Query 72456 CCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGTA 72514 || ||| |||| | ||||||| || | || || ||||| || | |||| Sbjct 449461 GTATCTTTGGGACATCATGTTGTACGATTCGACGACTCTCTCGATATCGTCACCG-TGTA 449519 Query 72515 TTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTT 72574 | || || || || | ||| | || ||| || |||||||| | | ||| || ||| Sbjct 449520 TACCAACAGCAACTCTCATAATCAAATGTTGTGGTCTTTCGGCAACCTTACCGTTGATTC 449579 Query 72575 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTT 72634 |||||||||| ||| |||||||||| || || || || |||||||| ||| || || | Sbjct 449580 TCAACAAGTAAGATCTTTCCAAAGTCTTGAATCCGAAGTAGTTGTAATTAAAATCACGGT 449639 Query 72635 CGTAAATAATAACCGAATTGAGTT---TATCCTTATATTTGTTAACTATATCCATGGTGA 72691 | | | ||| |||| || | | | || || | || ||||| | ||| Sbjct 449640 CAAATACAATTGCCGAGTTCAACTCGGGTGCATTGGCTTGGATA---ATATCGAACGTGT 449696 Query 72692 TACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCT 72751 | | ||||| || || || || ||| |||| || || || || | |||| ||| Sbjct 449697 CATTAGAAATCATTGGCGAGTGCAACCCTGTTTTTGGGTTCACGTATTCATATAACTCCC 449756 Query 72752 CCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGG 72811 | |||| ||| | || | |||| |||||| | || ||||| || || |||| Sbjct 449757 TACTGACTTGTGAAAACTGCTTGGTGGTTTGCTTGTGCAAGTTAGATACCGCGATCCTGG 449816 Query 72812 CGGCTAGAATGGCATAATCTGGATG--TTGT-GTAGTACAAGTGGCTGCTATTTCTGCTG 72868 | || | || || || || ||||| | || || || ||| ||||| | || |||| Sbjct 449817 CAGCCAAGATAGCGTAGTCAGGATGAATCGTAGTCATATAAGCGGCTG---TCTCAGCTG 449873 Query 72869 CCAGAGTGTCCAATTC 72884 ||| ||||||| || Sbjct 449874 CCAAGTTGTCCAACTC 449889 Score = 183 bits (202), Expect = 4e-41 Identities = 580/888 (65%), Gaps = 26/888 (3%) Strand=Plus/Plus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 || ||||| |||| || | |||||||| || || ||||| || | || || || ||| Sbjct 561371 TTCTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCTAAAGAAATGTTT 561430 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 ||||||||||| || || || || || || || | ||||| || | || | Sbjct 561431 TCCATGAAATCGAATGGGTTAGTGACGTTGTAGACCTTTTTGTTACCTAGCGCAACCAAT 561490 Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TAAG 41952 |||||||| || | ||||| | |||| ||| | | ||| ||||| |||| |||| Sbjct 561491 AATCTATCAGCAACAAATTCAACATATTGACACATTAAGTTACAGTTCATACCTAATAAG 561550 Query 41953 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 42012 | ||| | ||| | || ||||| | ||| || || || || || ||||| Sbjct 561551 GAGAT-TGGTAAAGCGTCGACAAAGAATTCCTTTTCGATCTCAACAGCTTCAGTAATAAT 561609 Query 42013 AGATCTT---ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 42069 |||| || | | || ||| | |||||| |||| ||||| || Sbjct 561610 ---TCTTTCAACAATAACAGCATCTGGTCTGTTTTGTAAATGAGAGAACAATAAACACGC 561666 Query 42070 GAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 42129 ||||| ||| | ||| || || | || || |||||||| || || || | || || Sbjct 561667 AAAATCAGTGTGTAAACCTTCGTCACGACATATCAATTCGTTAGAGAAGGTTAAACCAGG 561726 Query 42130 CATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCC 42189 ||| | || | ||| || | ||| || || || ||||| || ||| |||||||| || Sbjct 561727 CATCAAACCTCTCTTCTTCAACCAGAAAATGGAGGCAAACGAACCACTGAAGAAGATACC 561786 Query 42190 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCA 42246 ||| || || || || |||| | ||| || ||| | | || | ||| | ||||| Sbjct 561787 TTCGACAGCAGCGAAAGCAACTAATCTTTCACCAAATAAAGCGTCGTCGTCGTTGATCCA 561846 Query 42247 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 42306 || |||||| ||||||||||| || | |||||| || | || || |||||||| | Sbjct 561847 TCTTAAAGCCCAGTCGGCCTTCTTCTTGATACAAGGAATGTTATCGATAGCATTAAATAA 561906 Query 42307 ATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTA-TACATTTCTG 42365 | | ||| || |||||| | || || ||||| | | || | || | || | Sbjct 561907 GAAATCGGCTTCCTTTGGATCTTTGATGTAAGTGTCGATAAGTA-ACGAGTAAGTCTCAG 561965 Query 42366 AATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTA 42425 | ||||||||||| || || || || || |||||||| |||| || | || | Sbjct 561966 AGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCTGGGGTTTGGA 562025 Query 42426 CTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAA 42485 |||| | | | || |||| | || |||||||| || || |||||| || ||||||| Sbjct 562026 CTTCAGCAGAGAAATTTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGCAGCAAAAA 562085 Query 42486 ACGCCAATACATGTTTT----ATAAAATATTTTTCGTCCGGTGTT-AATTT---ATTCCA 42537 ||||||| | || | || || ||| |||| | | |||| ||||| ||||| Sbjct 562086 ACGCCAAGA----TTCTGGAAATGAAGTATCTTTCAT-TGTTGTTCAATTTTTCGTTCCA 562140 Query 42538 ATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTT 42597 || | |||| ||| | || | |||||| | ||||| || || ||||| || || Sbjct 562141 GTCTTGTGTATCCTTACCCAAGTCGATTTCTTCGGCGGTCCAGAAGGACGCTTCGGCTTT 562200 Query 42598 TTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 || ||||| | ||| || || || || | |||||||| | ||| || Sbjct 562201 CTTGTACATTTGCCAAATTTCGTGGTACTTGATTGGGAACAAAACGAA 562248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671137580876680