Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq103 127 3e-24 >seq103 Length=904190 Score = 127 bits (140), Expect = 3e-24 Identities = 307/457 (67%), Gaps = 12/457 (3%) Strand=Plus/Minus Query 97774 ACGGTTTGAGAAACTCTTTGCTGGTGGCACCGATGCCCACGGCTACCACTTCCCAAGTGT 97833 ||||| | |||||||| || | || || |||||||| || ||| ||||||| ||| | | Sbjct 448271 ACGGTATCAGAAACTCCTTATTAGTTGCTCCGATGCCAACTGCTTCCACTTCTCAAATTT 448212 Query 97834 TTGGCAATGCTGAATCTTTTGAACCGTTCACGTCAAACATGTACCAGAGACGCACCCAGT 97893 | || || ||||| ||| ||||| | ||| ||||| || ||| ||| | | Sbjct 448211 TAGGGAACAATGAATGTTTCGAACCATACACTTCAAATATTTACTCTAGAAGAGTTTTGG 448152 Query 97894 CTGGAGAGTTTCAATTGACCAACGTGCACTTGGTTCGAGACTTGGAACGGCTCAA--TCT 97951 |||| || |||||| | |||| |||| | || || |||| || | | | | Sbjct 448151 CTGGTGAATTTCAAATTGTCAACCCATACTTATTACGTGATTTGGT--GGATTTAGGTAT 448094 Query 97952 GTGGAACGATGACATGGCCCAGTTGATCATGTACAACAATGGGTCCATTCAAAACATTAC 98011 ||||||||||| ||| | || || | |||||| || || ||||||| | |||| Sbjct 448093 CTGGAACGATGATATGAAGAACAACATTATCTCCAACAACGGTTCTATTCAAACC-TTAC 448035 Query 98012 C-ATCATCCCGGAAGAGTTGCGCAGAATCTACAAGACTGTCTGGGAGATTCCGACCAAGA 98070 | | ||| || || || ||| | || ||||| || ||||| ||| | ||| Sbjct 448034 CTAACATTCCCGATGAATTGAAAGCCTTATATAAGACCGTTTGGGAAATTTCTCAAAAGC 447975 Query 98071 CGCTGATCGATATGGCTGCCGACAGAGGTGTCTACATTGACCAGAGTCAATCGTTCAATC 98130 | |||||||||||||| || |||| | | |||||| || |||||||| ||| Sbjct 447974 ATATTATCGATATGGCTGCTGATAGAGCGGCATTCATTGATCAATCACAATCGTTAAATA 447915 Query 98131 TGTACGTTGCCGAGCCCACCTACAGTCGTA---TGACTTCGATACACTTTTACGCATGGA 98187 | || || || |||| | | | ||| |||| ||||| || || || | |||| Sbjct 447914 TTCACATTAAGGA-CCCAACAATGG--GTAAGTTGACCTCGATGCATTTCTATGGTTGGA 447858 Query 98188 ACAAGGGCCTCAAGACGGGCATGTACTATCTGAGAAC 98224 | ||||| | |||||||| ||||||||| ||||||| Sbjct 447857 AGAAGGGTTTAAAGACGGGTATGTACTATTTGAGAAC 447821 Score = 118 bits (130), Expect = 2e-21 Identities = 377/580 (65%), Gaps = 6/580 (1%) Strand=Plus/Minus Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055 |||| || |||| ||| || || |||||| |||||||||| || || | || ||||| | Sbjct 562241 TGTTCCCAATCAAGTACCACGAAATTTGGCAAATGTACAAGAAAGCCGAAGCGTCCTTCT 562182 Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115 |||| | |||||| |||| || ||||| | || ||| | |||| Sbjct 562181 GGACCGCCGAAGAAATCGACTTGGGTAAGGATACACAAGACTGGAACGAAAAATTGAACA 562122 Query 125116 AAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCG 125175 | | ||| || | || || || || ||||| || ||||| | || || || || | Sbjct 562121 ACAATGAAAGATACTTCATTTCCAGAATCTTGGCGTTTTTTGCTGCTTCTGACGGTATTG 562062 Query 125176 TCAACGACAATCTG-TTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGC 125234 ||||||| || || |||| | |||||| || | | ||||| | ||| Sbjct 562061 TCAACGAAAACTTGGTTGAAAAT-TTCTCTGCTGAAGTCCAAACCCCAGAAGCCAAGTGT 562003 Query 125235 TTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATT 125294 || || || |||||||||||||| || ||| | ||||| || | ||||| ||| || Sbjct 562002 TTCTATGGTTTCCAAATCATGATGGAAAACATTCACTCTGAGACTTACTCGTTACTTATC 561943 Query 125295 GACATGTACATTCGCGATCCGCAACGTAAAC--ACATGCTCTTTAACGCAATCGACACGG 125352 |||| ||||| |||| ||| | || | | | | ||||| || ||||| | Sbjct 561942 GACACTTACATCAAAGATC--CAAAGGAAGCCGATTTCTTATTTAATGCTATCGATAACA 561885 Query 125353 TGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTT 125412 | || | ||| || ||||| | |||| | | |||||| | |||||| | ||| Sbjct 561884 TTCCTTGTATCAAGAAGAAGGCCGACTGGGCTTTAAGATGGATCAACGACGACGACGCTT 561825 Query 125413 CGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTT 125472 | | || ||| | || || ||||| || || || || |||||||| ||| | Sbjct 561824 TATTTGGTGAAAGATTAGTTGCTTTCGCTGCTGTCGAAGGTATCTTCTTCAGTGGTTCGT 561765 Query 125473 TTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACG 125532 |||| |||| || ||| | |||||| | || | ||||| || | || | ||||| Sbjct 561764 TTGCCTCCATTTTCTGGTTGAAGAAGAGAGGTTTGATGCCTGGTTTAACCTTCTCTAACG 561705 Query 125533 AGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572 | || |||| ||| ||||| || ||||| ||| ||||| Sbjct 561704 AATTGATATGTCGTGACGAAGGTTTACACACTGATTTTGC 561665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057412194680