Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq103 127 3e-24
>seq103
Length=904190
Score = 127 bits (140), Expect = 3e-24
Identities = 307/457 (67%), Gaps = 12/457 (3%)
Strand=Plus/Minus
Query 97774 ACGGTTTGAGAAACTCTTTGCTGGTGGCACCGATGCCCACGGCTACCACTTCCCAAGTGT 97833
||||| | |||||||| || | || || |||||||| || ||| ||||||| ||| | |
Sbjct 448271 ACGGTATCAGAAACTCCTTATTAGTTGCTCCGATGCCAACTGCTTCCACTTCTCAAATTT 448212
Query 97834 TTGGCAATGCTGAATCTTTTGAACCGTTCACGTCAAACATGTACCAGAGACGCACCCAGT 97893
| || || ||||| ||| ||||| | ||| ||||| || ||| ||| | |
Sbjct 448211 TAGGGAACAATGAATGTTTCGAACCATACACTTCAAATATTTACTCTAGAAGAGTTTTGG 448152
Query 97894 CTGGAGAGTTTCAATTGACCAACGTGCACTTGGTTCGAGACTTGGAACGGCTCAA--TCT 97951
|||| || |||||| | |||| |||| | || || |||| || | | | |
Sbjct 448151 CTGGTGAATTTCAAATTGTCAACCCATACTTATTACGTGATTTGGT--GGATTTAGGTAT 448094
Query 97952 GTGGAACGATGACATGGCCCAGTTGATCATGTACAACAATGGGTCCATTCAAAACATTAC 98011
||||||||||| ||| | || || | |||||| || || ||||||| | ||||
Sbjct 448093 CTGGAACGATGATATGAAGAACAACATTATCTCCAACAACGGTTCTATTCAAACC-TTAC 448035
Query 98012 C-ATCATCCCGGAAGAGTTGCGCAGAATCTACAAGACTGTCTGGGAGATTCCGACCAAGA 98070
| | ||| || || || ||| | || ||||| || ||||| ||| | |||
Sbjct 448034 CTAACATTCCCGATGAATTGAAAGCCTTATATAAGACCGTTTGGGAAATTTCTCAAAAGC 447975
Query 98071 CGCTGATCGATATGGCTGCCGACAGAGGTGTCTACATTGACCAGAGTCAATCGTTCAATC 98130
| |||||||||||||| || |||| | | |||||| || |||||||| |||
Sbjct 447974 ATATTATCGATATGGCTGCTGATAGAGCGGCATTCATTGATCAATCACAATCGTTAAATA 447915
Query 98131 TGTACGTTGCCGAGCCCACCTACAGTCGTA---TGACTTCGATACACTTTTACGCATGGA 98187
| || || || |||| | | | ||| |||| ||||| || || || | ||||
Sbjct 447914 TTCACATTAAGGA-CCCAACAATGG--GTAAGTTGACCTCGATGCATTTCTATGGTTGGA 447858
Query 98188 ACAAGGGCCTCAAGACGGGCATGTACTATCTGAGAAC 98224
| ||||| | |||||||| ||||||||| |||||||
Sbjct 447857 AGAAGGGTTTAAAGACGGGTATGTACTATTTGAGAAC 447821
Score = 118 bits (130), Expect = 2e-21
Identities = 377/580 (65%), Gaps = 6/580 (1%)
Strand=Plus/Minus
Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055
|||| || |||| ||| || || |||||| |||||||||| || || | || ||||| |
Sbjct 562241 TGTTCCCAATCAAGTACCACGAAATTTGGCAAATGTACAAGAAAGCCGAAGCGTCCTTCT 562182
Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115
|||| | |||||| |||| || ||||| | || ||| | ||||
Sbjct 562181 GGACCGCCGAAGAAATCGACTTGGGTAAGGATACACAAGACTGGAACGAAAAATTGAACA 562122
Query 125116 AAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCG 125175
| | ||| || | || || || || ||||| || ||||| | || || || || |
Sbjct 562121 ACAATGAAAGATACTTCATTTCCAGAATCTTGGCGTTTTTTGCTGCTTCTGACGGTATTG 562062
Query 125176 TCAACGACAATCTG-TTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGC 125234
||||||| || || |||| | |||||| || | | ||||| | |||
Sbjct 562061 TCAACGAAAACTTGGTTGAAAAT-TTCTCTGCTGAAGTCCAAACCCCAGAAGCCAAGTGT 562003
Query 125235 TTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATT 125294
|| || || |||||||||||||| || ||| | ||||| || | ||||| ||| ||
Sbjct 562002 TTCTATGGTTTCCAAATCATGATGGAAAACATTCACTCTGAGACTTACTCGTTACTTATC 561943
Query 125295 GACATGTACATTCGCGATCCGCAACGTAAAC--ACATGCTCTTTAACGCAATCGACACGG 125352
|||| ||||| |||| ||| | || | | | | ||||| || ||||| |
Sbjct 561942 GACACTTACATCAAAGATC--CAAAGGAAGCCGATTTCTTATTTAATGCTATCGATAACA 561885
Query 125353 TGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTT 125412
| || | ||| || ||||| | |||| | | |||||| | |||||| | |||
Sbjct 561884 TTCCTTGTATCAAGAAGAAGGCCGACTGGGCTTTAAGATGGATCAACGACGACGACGCTT 561825
Query 125413 CGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTT 125472
| | || ||| | || || ||||| || || || || |||||||| ||| |
Sbjct 561824 TATTTGGTGAAAGATTAGTTGCTTTCGCTGCTGTCGAAGGTATCTTCTTCAGTGGTTCGT 561765
Query 125473 TTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACG 125532
|||| |||| || ||| | |||||| | || | ||||| || | || | |||||
Sbjct 561764 TTGCCTCCATTTTCTGGTTGAAGAAGAGAGGTTTGATGCCTGGTTTAACCTTCTCTAACG 561705
Query 125533 AGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572
| || |||| ||| ||||| || ||||| ||| |||||
Sbjct 561704 AATTGATATGTCGTGACGAAGGTTTACACACTGATTTTGC 561665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741057412194680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |