Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq103 219 1e-51
seq101 156 1e-32
seq141 141 2e-28
seq105 87.8 4e-12
>seq103
Length=904190
Score = 219 bits (242), Expect = 1e-51
Identities = 574/862 (67%), Gaps = 23/862 (3%)
Strand=Plus/Minus
Query 268742 ATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGAC 268801
|||||||| | |||| || || || ||||| | |||||| | || || | | ||
Sbjct 562209 ATGTACAAGAAAGCCGAAGCGTCCTTCTGGACCGCCGAAGAAATCGACTTGGGTAAGGAT 562150
Query 268802 TTAATAGATTGGAA----AAATTTAAAACCAGAAGAAAGAAGATTTATATCTTATATTCT 268857
| ||| ||||| ||||| || | || | |||||| || || || | | |||
Sbjct 562149 ACACAAGACTGGAACGAAAAATTGAACAACA-ATGAAAGATACTTCATTTCC-AGAATCT 562092
Query 268858 TG-CGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTC 268916
|| |||||||||| | | ||| ||||| || |||||||| | || || || |||| |
Sbjct 562091 TGGCGTTTTTTGCTGCTTCTGACGGTATTGTCAACGAAAACTTGGTTGAAAATTTCTCTG 562032
Query 268917 AAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATA 268976
|| || || | || ||||||| ||||| || || ||||| || || ||||| |
Sbjct 562031 CTGAAGTCCAAACCCCAGAAGCCAAGTGTTTCTATGGTTTCCAAATCATGATGGAAAACA 561972
Query 268977 TTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGA 269036
|||| || |||| ||| || | || || ||||| || | ||| || |||
Sbjct 561971 TTCACTCTGAGACTTACTCGTTACTTATCGACACTTACATCAAAGATCCAAAGGAAGCCG 561912
Query 269037 AAAGACTATTTTCTTCTAT-GAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCT 269095
| ||||| | |||| || ||| || ||| | | || || | || ||||||
Sbjct 561911 ATTTCTTATTTAATGCTATCGATAAC-ATTCCTTGTATCAAGAAGAAGGCCGACTGGGCT 561853
Query 269096 CTGAAATGGATAAACGATAGCG-CGCCTTAC--GGAGAAAGGTTAGTTGCTTTTGCCGCT 269152
| | |||||| ||||| || ||| ||| || ||||| ||||||||||| || |||
Sbjct 561852 TTAAGATGGATCAACGACGACGACGCTTTATTTGGTGAAAGATTAGTTGCTTTCGCTGCT 561793
Query 269153 GTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGC 269212
|| |||||||| ||||| || || |||||| | || || ||||||||||| |||||
Sbjct 561792 GTCGAAGGTATCTTCTTCAGTGGTTCGTTTGCCTCCATTTTCTGGTTGAAGAAGAGAGGT 561733
Query 269213 CTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGC 269272
| ||||| || ||||| |||||||||||||||||| | | |||||||||||||||
Sbjct 561732 TTGATGCCTGGTTTAACCTTCTCTAACGAATTGATATGTCGTGACGAAGGTTTACACACT 561673
Query 269273 GACTTCGCTTGTTTATTATTTACTAATTATCTTTCACACAAACCTTCTCAAGATAGAGTA 269332
|| || || |||||||| || || ||| | | ||| ||| | | || ||
Sbjct 561672 GATTTTGCGTGTTTATTGTTCTCTCATT---TACAAAACAGACCAGATGCTGTTATTGTT 561616
Query 269333 TACGAAATTATAGATTCAGCTGTTTCTGTAGAAACAGAATTTCTAACGGAAGCTCTATCT 269392
| |||||| | ||||||| | |||| ||||| | || ||| || |
Sbjct 561615 GAAAGAATTATTACTGAAGCTGTTGAGATCGAAAAGGAATTCTTTGTCGACGCTTTACCA 561556
Query 269393 ATCGATCTTA-TCGGTATGAATAGCAAATCGATGATAGAATATATTAAGTTCGTATCTGA 269451
||| |||| | |||||||| | || | ||| ||||| || | || || ||||
Sbjct 561555 ATC-TCCTTATTAGGTATGAACTGTAACTTAATGTGTCAATATGTTGAATTTGTTGCTGA 561497
Query 269452 TAGATTGCTGGTGTCTTTAGGGTTTAGTAAAAA---ATATAACGTTGAAAATCCGTTTAG 269508
|||||| |||| | |||| || ||||| || ||||| || || ||
Sbjct 561496 TAGATTATTGGTTGCGCTAGG---TAACAAAAAGGTCTACAACGTCACTAACCCATTCGA 561440
Query 269509 TTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTCGAGAAGCGGGTAAGTAA 269568
||| ||||| || || || |||| |||||| | || |||||||| ||| | || ||| |
Sbjct 561439 TTTCATGGAAAACATTTCTTTAGCCGGTAAGACCAACTTCTTCGAAAAGAGAGTCAGTGA 561380
Query 269569 CTATCAGAAAATGGGTGTAATG 269590
|| ||||| ||||| |||
Sbjct 561379 TTACCAGAAGGCTGGTGTCATG 561358
>seq101
Length=125820
Score = 156 bits (172), Expect = 1e-32
Identities = 173/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392
|| ||||||| || | || | ||||| || ||||| || ||||| || || ||||||
Sbjct 105247 CCACCTCTTAATCTTAAGACCAAGTGTAAAGTGGATTCCTTTTGAATGTTGTAATCAGAT 105306
Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452
| |||||||| ||||||| ||| || ||||| || |||| || ||||||||||| ||
Sbjct 105307 AAGGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGGA 105366
Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512
|| |||||||| || || ||||| | || ||||| || | ||| || || ||| ||
Sbjct 105367 ATACCTTCTTTGTCTTGGATCTTAGACTTGACATTGTCAATGGTGTCCGAAGATTCAACT 105426
Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563
|||| ||||| ||||||||||| | || || || || || |||||||||
Sbjct 105427 TCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTTG 105477
>seq141
Length=295507
Score = 141 bits (156), Expect = 2e-28
Identities = 155/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|||||||| ||||| || || ||||| || ||||||| ||||| || ||||||| |||
Sbjct 197357 TGTAATGTGGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGCCATCTTCTAATTGC 197416
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| || |||||||||| ||||||||||| || || || ||||| || || ||||||||
Sbjct 197417 TTACCGGCAAAAATTAATCTCTGTTGATCTGGCGGAATACCTTCCTTGTCTTGAATCTTG 197476
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
| || || || || | ||| || | || || |||| ||||| |||||||| ||
Sbjct 197477 GACTTGACGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAATGGTCTTACCTGTT 197536
Query 104537 AGTGTTTTTACAAATATCTGCATTTT 104562
| |||||| || || || ||||| ||
Sbjct 197537 AATGTTTTAACGAAGATTTGCATATT 197562
Score = 132 bits (146), Expect = 1e-25
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|||||||| ||||| || || ||||| || ||||||| ||||| || ||||||| |||
Sbjct 197129 TGTAATGTGGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGCCATCTTCTAATTGC 197188
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| || |||||||||| ||||||||||| || || || ||||| || || ||||||||
Sbjct 197189 TTACCGGCAAAAATTAATCTCTGTTGATCTGGCGGAATACCTTCCTTGTCTTGAATCTTG 197248
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
| || || || || | ||| || | || || |||| ||||| |||||||| ||
Sbjct 197249 GACTTGACGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAATGGTCTTACCTGTC 197308
Query 104537 AGTGTTTTTACAAATATCTGCAT 104559
| || || || || || |||||
Sbjct 197309 AAAGTCTTGACGAAAATTTGCAT 197331
>seq105
Length=815575
Score = 87.8 bits (96), Expect = 4e-12
Identities = 130/180 (72%), Gaps = 6/180 (3%)
Strand=Plus/Plus
Query 105446 AATTTCTGGACCATGGAAATAAAGAACTATCTCTATGTAAGAAACAT-ACGGCGTAACCC 105504
||| ||| || |||| || | |||| ||||||||||| ||| || || ||||||||
Sbjct 357082 AATGTCTAGAATATGGCAAAAGAGAAAATTCTCTATGTAA-AAAGATAACTGCGTAACC- 357139
Query 105505 GATGCTATA--AATTTTTCTACAGATATAGCCCCTCTCATCCCAGTACTGAAATTTTCTA 105562
|| || || || | |||| | || | || ||||| | |||| ||||||||| || |
Sbjct 357140 -ATTCTCTAAGAAGTATTCTGCTGAAGTTGCACCTCTTGTACCAGCACTGAAATTATCGA 357198
Query 105563 AAAATCTTACTGGATTTTTCTCTAAAGATACCCTTGTGCCTCCTGATGCAACCAATACAA 105622
|||||| || | ||| |||||||| | ||| | || ||||| || | |||||| |||
Sbjct 357199 TAAATCTAACGGTATTGTTCTCTAACGGTACAGTGGTACCTCCAGAAGTCACCAATGCAA 357258
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151395552807644
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |