Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq141 120 3e-22 seq101 111 1e-19 >seq141 Length=295507 Score = 120 bits (132), Expect = 3e-22 Identities = 172/240 (72%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || || || ||||||| || |||||||| || || ||||||||||| | Sbjct 197321 AAAATTTGCATACCACCCCTCAATCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATA 197380 Query 94829 TTATAATC-GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 || ||||| | | || || || ||| || | || || ||| |||| |||||||| || Sbjct 197381 TTGTAATCAGATAAT-GTTCTGCCATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTG 197439 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 |||||||| ||||||||||| ||||| | ||| || | ||||||| | | | ||||| Sbjct 197440 TTGATCTGGCGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTC 197499 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || | || ||||| || || || | ||||| || ||||| ||||| Sbjct 197500 TGATGACTCAACTTCTAAGGTAATGGTCTTACCTGTTAATGTTTTAACGAAGATTTGCAT 197559 Score = 114 bits (126), Expect = 1e-20 Identities = 171/240 (71%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || || || ||||||| || |||||||| || || ||||||||||| | Sbjct 197093 AAAATTTGCATACCACCCCTCAATCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATA 197152 Query 94829 TTATAATC-GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 || ||||| | | || || || ||| || | || || ||| |||| |||||||| || Sbjct 197153 TTGTAATCAGATAAT-GTTCTGCCATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTG 197211 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 |||||||| ||||||||||| ||||| | ||| || | ||||||| | | | ||||| Sbjct 197212 TTGATCTGGCGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTC 197271 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || | || ||||| || || || | ||| || || || || ||||| Sbjct 197272 TGATGACTCAACTTCTAAGGTAATGGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 197331 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC-GCT 94839 || |||||||||| || |||||||| || || ||||||||||| | || ||||| | | Sbjct 196877 CCACCTCTCAATCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGAT 196936 Query 94840 CATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGG 94899 || || || ||| || | || || ||| |||| |||||||| || || ||||| || Sbjct 196937 AAT-GTTCTGCCATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGGTCTGGTGG 196995 Query 94900 AATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGAC 94959 ||||||||| ||||| | ||| || | ||||||| | | | ||||| | || || Sbjct 196996 AATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAAC 197055 Query 94960 GTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || ||||| || || || | ||| || || || || ||||| Sbjct 197056 TTCTAAGGTAATGGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 197103 >seq101 Length=125820 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| |||| || |||||||| ||||| ||||||||||| | ||| ||||| Sbjct 105247 CCACCTCTTAATCTTAAGACCAAGTGTAAAGTGGATTCCTTTTGAATGTTGTAATCAG-- 105304 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 ||| ||| | ||| || | || || || | |||||||||||||| ||||| || | Sbjct 105305 ATAAGGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTG 105364 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 |||||||||||||||| | || || | |||||| | | | ||||| | || | Sbjct 105365 GAATACCTTCTTTGTCTTGGATCTTAGACTTGACATTGTCAATGGTGTCCGAAGATTCAA 105424 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | || ||||| || ||||| | ||| || || || || ||||| Sbjct 105425 CTTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCAT 105473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290118497480