Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq141 120 3e-22
seq101 111 1e-19
>seq141
Length=295507
Score = 120 bits (132), Expect = 3e-22
Identities = 172/240 (72%), Gaps = 2/240 (1%)
Strand=Plus/Plus
Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828
||| ||| || || || ||||||| || |||||||| || || ||||||||||| |
Sbjct 197321 AAAATTTGCATACCACCCCTCAATCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATA 197380
Query 94829 TTATAATC-GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
|| ||||| | | || || || ||| || | || || ||| |||| |||||||| ||
Sbjct 197381 TTGTAATCAGATAAT-GTTCTGCCATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTG 197439
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
|||||||| ||||||||||| ||||| | ||| || | ||||||| | | | |||||
Sbjct 197440 TTGATCTGGCGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTC 197499
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || || || | || ||||| || || || | ||||| || ||||| |||||
Sbjct 197500 TGATGACTCAACTTCTAAGGTAATGGTCTTACCTGTTAATGTTTTAACGAAGATTTGCAT 197559
Score = 114 bits (126), Expect = 1e-20
Identities = 171/240 (71%), Gaps = 2/240 (1%)
Strand=Plus/Plus
Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828
||| ||| || || || ||||||| || |||||||| || || ||||||||||| |
Sbjct 197093 AAAATTTGCATACCACCCCTCAATCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATA 197152
Query 94829 TTATAATC-GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
|| ||||| | | || || || ||| || | || || ||| |||| |||||||| ||
Sbjct 197153 TTGTAATCAGATAAT-GTTCTGCCATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTG 197211
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
|||||||| ||||||||||| ||||| | ||| || | ||||||| | | | |||||
Sbjct 197212 TTGATCTGGCGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTC 197271
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || || || | || ||||| || || || | ||| || || || || |||||
Sbjct 197272 TGATGACTCAACTTCTAAGGTAATGGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 197331
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC-GCT 94839
|| |||||||||| || |||||||| || || ||||||||||| | || ||||| | |
Sbjct 196877 CCACCTCTCAATCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGAT 196936
Query 94840 CATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGG 94899
|| || || ||| || | || || ||| |||| |||||||| || || ||||| ||
Sbjct 196937 AAT-GTTCTGCCATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGGTCTGGTGG 196995
Query 94900 AATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGAC 94959
||||||||| ||||| | ||| || | ||||||| | | | ||||| | || ||
Sbjct 196996 AATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAAC 197055
Query 94960 GTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | || ||||| || || || | ||| || || || || |||||
Sbjct 197056 TTCTAAGGTAATGGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 197103
>seq101
Length=125820
Score = 111 bits (122), Expect = 1e-19
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| |||| || |||||||| ||||| ||||||||||| | ||| |||||
Sbjct 105247 CCACCTCTTAATCTTAAGACCAAGTGTAAAGTGGATTCCTTTTGAATGTTGTAATCAG-- 105304
Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898
||| ||| | ||| || | || || || | |||||||||||||| ||||| || |
Sbjct 105305 ATAAGGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTG 105364
Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958
|||||||||||||||| | || || | |||||| | | | ||||| | || |
Sbjct 105365 GAATACCTTCTTTGTCTTGGATCTTAGACTTGACATTGTCAATGGTGTCCGAAGATTCAA 105424
Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || | || ||||| || ||||| | ||| || || || || |||||
Sbjct 105425 CTTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCAT 105473
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448290118497480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |