Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq103 437 1e-117 >seq103 Length=904190 Score = 437 bits (484), Expect = 1e-117 Identities = 1308/1996 (66%), Gaps = 43/1996 (2%) Strand=Plus/Plus Query 62112 ATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTT 62171 || || ||||| | ||||| |||||| ||||| || | || || |||||||| | Sbjct 447908 ATGTGAATATTTAACGATTGTGATTGATCAATGAATGCCGCTCTATCAGCAGCCATATCG 447967 Query 62172 ATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGG 62230 || || |||||| | ||||||||||| || ||||| || | | ||| || || || Sbjct 447968 ATAATATGCTTTTGAGAAATTTCCCAAACGGTCTTATATAAGGCTTTCAAT-TCATCGGG 448026 Query 62231 AAGGTTTG-TAT--TCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATC 62287 || ||| | || | ||||| || || | | ||||| | ||||| || ||||| Sbjct 448027 AATGTTAGGTAAGGTTTGAATAGAACCGTTGTTGGAGATAATGTTGTTCTTCATATCATC 448086 Query 62288 ATTCCATAATTTTCTCTCGGTTAAAACTC-TAAGGAGATGCGGATTAACTACTTGAAATT 62346 ||||| | | || ||| | | ||| || | || || || | |||||||| Sbjct 448087 GTTCCAGATACCTAAATCCACCAAATCACGTAATAAG-TATGGGTTGACAATTTGAAATT 448145 Query 62347 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTAT 62406 | |||| ||| ||||| | || ||||||||| || || ||||| | | ||||| | Sbjct 448146 CACCAGCCAAAACTCTTCTAGAGTAAATATTTGAAGTGTATGGTTCGAAACATTCATTGT 448205 Query 62407 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 62466 | || |||||||||| ||| || ||||| ||||| || || || ||||| ||||| | Sbjct 448206 TCCCTAAAATTTGAGAAGTGGAAGCAGTTGGCATCGGAGCAACTAATAAGGAGTTTCTGA 448265 Query 62467 GACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAA 62526 ||||| | | | || | || | || ||||| | ||| | || | || Sbjct 448266 TACCGTGTTTGGCCAAGTTTTGCTTCAAAGTATCCCAGTCCCATAATTCAGTTGGCTTTC 448325 Query 62527 CNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGT 62586 ||||| | ||| ||| || || ||| ||||||| | || Sbjct 448326 TTTCCCACAAGTCAAATTGTAAGACACCCTTAGATGCTGGAGAACCTTCATATGTTTGGT 448385 Query 62587 ATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTT 62646 | || ||||| | ||||| | |||| || || | ||||||| |||||||||| Sbjct 448386 ACGGGCCTTCGATTTCAGCCAATTCAATGGATGCTTCCACAGCACCGTGGTAAATGGTTT 448445 Query 62647 CGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGA- 62705 | || || | | |||| |||| ||||| | |||||||| |||| | | | Sbjct 448446 CAAAAATTTGGGTGTTTAATTCTTTAGCTTCTTGAGAGTCAAATGG-TAATCTCAATGCC 448504 Query 62706 ATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 62765 ||||| || || ||||| ||||||||||| | | || ||||| | |||| | || ||| Sbjct 448505 ATAAAAGCATCGGCTAAACCTTGAACACCTAAGGCAATTGGTCTGTTTCTCATGTTCGAG 448564 Query 62766 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC---TG 62822 | ||||||||||| || || || ||| || |||||| |||| | || | | Sbjct 448565 TTCCTAGCTTCTGGAACTGGGTAGTAGTTACGGTCGATAATTCTATTTAAGTTACGCGTC 448624 Query 62823 ACAATTACTTTGACCACATCCT-TCAGTTTGAGAAA----ATCAAATCGC----CCATCT 62873 |||| ||| | || || | | | ||| |||| | ||| | | | ||| Sbjct 448625 ACAAC--CTTAGTA-ACTTCATGTAACTTTTCGAAATCGTACCAACTGGAGGTACTGTCT 448681 Query 62874 ATTACAA-ACATGTTC--AAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCA 62930 || ||| | ||| | ||||||| ||| |||| |||||||| || || |||| || Sbjct 448682 CTTTCAACAAATGATGGTAAGGCAATAGAAGCCAAGTTACAAACAGCAACTTCATCAGGC 448741 Query 62931 TCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGT 62990 | | |||| | |||||| || | ||| | ||||| | ||||| || | | Sbjct 448742 GCAGAGTATTCAACAATCTCACAACACAAGTTAGATGATTTGATGATACCTAAGTTCTTT 448801 Query 62991 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 63050 ||||| |||| |||||||| ||||||||||| | || ||||||||||| |||||| | Sbjct 448802 TGATTGGTCTTCTTGTTACAAGCATCCTTATATAACATAAATGGAGTACCGGTTTCAGTT 448861 Query 63051 TGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTT 63110 || | || | ||||| | ||| | | ||||||| || | |||| | | || Sbjct 448862 TGTGCATCCAAGATCGCGTACCATAATTTTTGAGCCTTAATAACAGATCTACCACGGTTT 448921 Query 63111 TCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCA 63170 ||| |||||||| | || ||| |||||| || || || | |||| || || Sbjct 448922 TCTTTTTCGTATTTGGAGTATAATTCTTCGAATTCATCACCATAGACATCTGATAAACCT 448981 Query 63171 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 63230 ||| ||| | ||| | | || | ||| || |||| | | |||| ||||| || Sbjct 448982 GGAGCTTCGTTTGGAGAGAATAATGTCCAGTCACCGTTTTGTTCAACTCTCTTCATGAAT 449041 Query 63231 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTA 63290 | |||||||||||| | || |||| |||||| | ||||| ||| || || || | Sbjct 449042 AAATCAGGAATCCATAAGGCCGGGAATAAATCTCTAGCTCTATTTTCTTCTTTGCCGTGA 449101 Query 63291 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 63350 |||||| | | ||| | ||| | | ||||| | |||||| ||||||||||| | || Sbjct 449102 TTCTTTCTGATATCTATGAAGTCGAATATATCCGCATGCCAAGGTTCCAAGTAAAGAGCA 449161 Query 63351 ATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 63410 | | ||||| | ||||| || || ||||| | || | ||||||||| ||| |||| Sbjct 449162 AAGGCACCAGGTCTCTTGTTACCACCTTGATCCACATAACGAGCGGTGTTGTTAAAAACA 449221 Query 63411 CTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTG 63470 | | ||||||||| ||||| || || |||| |||||||||| ||| || | ||| || Sbjct 449222 CGAACCATTGGAATGATACCATTAGAAGTACCGTTGGTACCGGCGATGTAAGTACCAGTG 449281 Query 63471 GCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCAT 63530 | |||||| || ||| || ||| || || ||||| | || || || || || || Sbjct 449282 GAACGAATGTTGTGAATGTGTAAACCAATGCCACCTGCACTCTTGGAAATCAAAGCACA- 449340 Query 63531 CGT-TTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACA 63589 ||| || || ||||| |||||||| || ||| ||||| |||| || || ||||| Sbjct 449341 CGTCTTCAAGGTGTCGTAGATACCGTCAATGGAGTCATCCTTCATAGCAACTAAGAAACA 449400 Query 63590 GCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAA 63649 ||||||||| | | | || || |||||||||||||| || ||| |||| || || Sbjct 449401 AGAAGACATTTGTGGGCTAGGGGTACCAGCATTAAATAAGGTTGGCGAACCGTGGGTGAA 449460 Query 63650 CCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAA 63708 || ||| || | | ||||||| || | || || ||||| || | || | Sbjct 449461 GTATCTTTGGGACATCATGTTGTACGATTCGACGACTCTCTCGATATCGTCACCG-TGTA 449519 Query 63709 TTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTT 63768 | || || || || | ||| | || || || |||||||| | | ||| ||| ||| Sbjct 449520 TACCAACAGCAACTCTCATAATCAAATGTTGTGGTCTTTCGGCAACCTTACCGTTGATTC 449579 Query 63769 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTT 63828 |||||||||| ||| |||||||||| || || || || |||||||| ||| || || | Sbjct 449580 TCAACAAGTAAGATCTTTCCAAAGTCTTGAATCCGAAGTAGTTGTAATTAAAATCACGGT 449639 Query 63829 CGTAAATAATAACCGAGTTGAGTT---TATCCTTATATTTGTTAACTATATCCATGGTGA 63885 | | | ||| ||||||| | | | || || | || ||||| | ||| Sbjct 449640 CAAATACAATTGCCGAGTTCAACTCGGGTGCATTGGCTTGGATA---ATATCGAACGTGT 449696 Query 63886 TACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCT 63945 | | ||||| || || || || ||| |||| || || || || | |||| ||| Sbjct 449697 CATTAGAAATCATTGGCGAGTGCAACCCTGTTTTTGGGTTCACGTATTCATATAACTCCC 449756 Query 63946 CCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGG 64005 | |||| ||| | || | |||| |||||| | || ||||| || || |||| Sbjct 449757 TACTGACTTGTGAAAACTGCTTGGTGGTTTGCTTGTGCAAGTTAGATACCGCGATCCTGG 449816 Query 64006 CGGCTAGAATGGCATAATCCGGATG--TTGT-GTAGTACAAGTGGCTGCTATTTCGGCTG 64062 | || | || || || || ||||| | || || || ||| ||||| | || |||| Sbjct 449817 CAGCCAAGATAGCGTAGTCAGGATGAATCGTAGTCATATAAGCGGCTG---TCTCAGCTG 449873 Query 64063 CCAGAGTGTCCAATTC 64078 ||| ||||||| || Sbjct 449874 CCAAGTTGTCCAACTC 449889 Score = 190 bits (210), Expect = 3e-43 Identities = 579/885 (65%), Gaps = 20/885 (2%) Strand=Plus/Plus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 || ||||| |||| || | |||||||| || || || || || | || || || ||| Sbjct 561371 TTCTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCTAAAGAAATGTTT 561430 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 ||||||||||| || || || || || || || | ||||| || | || | Sbjct 561431 TCCATGAAATCGAATGGGTTAGTGACGTTGTAGACCTTTTTGTTACCTAGCGCAACCAAT 561490 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TAAG 33191 |||||||| || || ||||| | |||| ||| | | ||| ||||| |||| |||| Sbjct 561491 AATCTATCAGCAACAAATTCAACATATTGACACATTAAGTTACAGTTCATACCTAATAAG 561550 Query 33192 TTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 33251 | ||| | ||| | || ||||| | ||| || || || || || ||||| Sbjct 561551 GAGAT-TGGTAAAGCGTCGACAAAGAATTCCTTTTCGATCTCAACAGCTTCAGTAATAAT 561609 Query 33252 AGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAA 33311 | ||| | | || ||| | |||||| |||| ||||| || || Sbjct 561610 TCTTTCAACAATAACAGCATCTGGTCTGTTTTGTAAATGAGAGAACAATAAACACGCAAA 561669 Query 33312 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCAT 33371 ||| ||| | ||| ||||| | || || | |||||| || || || | || ||||| Sbjct 561670 ATCAGTGTGTAAACCTTCGTCACGACATATCAATTCGTTAGAGAAGGTTAAACCAGGCAT 561729 Query 33372 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTC 33431 | || | ||| || | ||| || ||||| || || || ||| |||||||| ||||| Sbjct 561730 CAAACCTCTCTTCTTCAACCAGAAAATGGAGGCAAACGAACCACTGAAGAAGATACCTTC 561789 Query 33432 TACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTT 33488 || ||||| || |||| | ||| || ||| | | || || ||| | ||||| | Sbjct 561790 GACAGCAGCGAAAGCAACTAATCTTTCACCAAATAAAGCGTCGTCGTCGTTGATCCATCT 561849 Query 33489 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 33548 | |||||| ||||||||||| || | |||||| || | || || |||||||| | | Sbjct 561850 TAAAGCCCAGTCGGCCTTCTTCTTGATACAAGGAATGTTATCGATAGCATTAAATAAGAA 561909 Query 33549 GtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTA-TACATTTCCGAAT 33607 | ||| || |||||| | ||||| ||||| | | || | || | || || | Sbjct 561910 ATCGGCTTCCTTTGGATCTTTGATGTAAGTGTCGATAAGTA-ACGAGTAAGTCTCAGAGT 561968 Query 33608 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTT 33667 |||||||||| || || || || || |||||||| | || || | | || |||| Sbjct 561969 GAATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCTGGGGTTTGGACTT 562028 Query 33668 CTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 33727 | | | | || ||| |||| ||||| || || || |||||| || |||||||||| Sbjct 562029 CAGCAGAGAAATTTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGCAGCAAAAAACG 562088 Query 33728 CCAATACATGTTTT----ATAAAATATTTTTCGTCTGGTGTT-AGTTT---ATTCCAATC 33779 |||| | || | || || ||| |||| | || |||| | ||| ||||| || Sbjct 562089 CCAAGA----TTCTGGAAATGAAGTATCTTTCAT-TGTTGTTCAATTTTTCGTTCCAGTC 562143 Query 33780 ATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTT 33839 | |||| ||| | || | |||||| | ||||| || || || || || || || Sbjct 562144 TTGTGTATCCTTACCCAAGTCGATTTCTTCGGCGGTCCAGAAGGACGCTTCGGCTTTCTT 562203 Query 33840 ATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884 ||||| | ||| || || | || | ||||||||| | ||| || Sbjct 562204 GTACATTTGCCAAATTTCGTGGTACTTGATTGGGAACAAAACGAA 562248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622945697139880