Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq103 147 6e-30 >seq103 Length=904190 Score = 147 bits (162), Expect = 6e-30 Identities = 504/772 (65%), Gaps = 28/772 (4%) Strand=Plus/Minus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| |||| ||||||| | | |||||||| || | || ||||| ||||||||| Sbjct 449460 TTCACCCACGGTTCGCCAACCTTATTTAATGCTGGTACCCCTAGCCCACAAATGTCTTCT 449401 Query 363607 TGCTTTCTT-CTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665 || |||||| | |||||||| || ||||| || ||||||| ||||| | |||| Sbjct 449400 TG-TTTCTTAGTTGCTATGAAGGATGACTCCATTGACGGTATCTACGACACCTTGAAGAC 449342 Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCG-TG 363724 |||||| | |||||||||| |||||| || |||||| || || ||||| |||| | Sbjct 449341 GTGTGCTTTGATTTCCAAGAGTGCAGGTGGCATTGGTTTACACATTCACAACATTCGTTC 449282 Query 363725 CACAGAACAGTTACATTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTT 363783 ||| | | |||||| ||| || || ||| || ||||| | |||| ||| || Sbjct 449281 CACTG-GTACTTACATCGCCGGTACCAACGG-TACTTCTAATGGTATCATTCCAATGGTT 449224 Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843 ||||| ||| |||| || || | || || || || ||||| ||| | || || Sbjct 449223 CGTGTTTTTAACAACACCGCTCGTTATGTGGATCAAGGTGGTAACAAGAGACCTGGTGCC 449164 Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA- 363902 |||||| | || | || ||| ||||| ||||| || || || | || || | || Sbjct 449163 TTTGCTCTTTACTTGGAACCTTGGCATGCGGATATATTCGACTTCATAGATATCAGAAAG 449104 Query 363903 AAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGA 363962 || ||| || ||||| ||| | || | ||| | ||| || | ||| || |||| Sbjct 449103 AATCAC-GGCAAAGAAGAAAATAGAGCTAGAGATTTATTCCCGGCCTTATGGATTCCTGA 449045 Query 363963 CCATTTTATGAAGCGCGTGGAGGCA---GGTAAGAATTGGTCACTCTTTTGCCCACACGA 364019 || |||||| | || || | ||| | ||| || | || | ||| |||| Sbjct 449044 TTTATTCATGAAGAGAGTTGAACAAAACGGT---GACTGGACATTATTCTCTCCAAACGA 448988 Query 364020 ATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGA 364079 | ||||||| | || ||||| | ||||| || | | | ||||| || || || Sbjct 448987 AGCTCCAGGTTTATCAGATGTCTATGGTGATGAATTCGAAGAATTATACTCCAAATACGA 448928 Query 364080 ATCGGAGGGAAAGGCTCGTAAGAC---AATTCCCGCACAGAAGCTATGGTTTGCCATCAT 364136 | | | ||| | ||| | ||| || || || |||||| || ||| | Sbjct 448927 A---AAAGAAAACCGTGGTAGATCTGTTATTAAGGCTCAAAAATTATGGTACGCGATCTT 448871 Query 364137 GGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAA 364196 |||| | || | ||| || || || || | |||||| || || ||| | || ||| || Sbjct 448870 GGATGCACAAACTGAAACCGGTACTCCATTTATGTTATATAAGGATGCTTGTAACAAGAA 448811 Query 364197 GTCCAACCAGCAGCACCTTGGTA----CAATTCAGCAGAGCAACCTATGTACCGAGATTA 364252 | |||| || || || | |||| ||| ||| | ||| | ||| |||||| Sbjct 448810 GACCAATCAAAAGAACTTAGGTATCATCAAATCATC----TAACTTGTGTTGTGAGATTG 448755 Query 364253 TTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGC 364304 |||||||| | || || || || ||| || |||||| | || || || || Sbjct 448754 TTGAATACTCTGCGCCTGATGAAGTTGCTGTTTGTAACTTGGCTTCTATTGC 448703 Score = 132 bits (146), Expect = 1e-25 Identities = 485/748 (65%), Gaps = 30/748 (4%) Strand=Plus/Minus Query 22219 GCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTGCATCT 22278 || || |||||| | | |||||||| || || || | || ||||| | || Sbjct 562089 GCGTTTTTTGCTGCTTCTGACGGTATTGTCAACGAAAACTTGGTTGAAAATTTCTCTGCT 562030 Query 22279 GAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATGTT 22338 ||| | ||| |||||| |||| |||||||||||| | ||||| ||||| ||||| || Sbjct 562029 GAAGTCCAAACCCCAGAAGCCAAGTGTTTCTATGGTTTCCAAATCATGATGGAAAACATT 561970 Query 22339 CACGCGGAAACATATTCTATGATGCTACAGTCACT--CGTAGAAGATAAAGACGAACAAC 22396 ||| | || || || || | | || | |||| | | ||||| | | ||| | Sbjct 561969 CACTCTGAGACTTACTCGTTACT--TATCGACACTTACATCAAAGATCCAAAGGAAGC-C 561913 Query 22397 GAAA-CTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGGGCG 22455 || |||||| || || | ||||| | || ||||| ||||| || ||||| Sbjct 561912 GATTTCTTATTTAATGCTATCGATAACATTCCTTGTATCAAGAAGAAGGCCGACTGGGCT 561853 Query 22456 CTGAAATGGATGAACAATGA--ACG-TTCATTCGCGGAACGTCTTATTGCATTTGCTGTG 22512 | | |||||| ||| | || ||| || ||| | ||| | | |||| || |||| Sbjct 561852 TTAAGATGGATCAACGACGACGACGCTTTATTTGGTGAAAGATTAGTTGCTTTCGCTGCT 561793 Query 22513 GTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCA 22572 || ||||| || ||||| ||| | ||| | || || ||| | || || | | Sbjct 561792 GTCGAAGGTATCTTCTTCAGTGGTTCGTTTGCCTCCATTTTCTGGTTGAAGAAGAGAGGT 561733 Query 22573 ATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACC 22632 | ||||| ||| |||| || || || || || || | || || || ||| | || || Sbjct 561732 TTGATGCCTGGTTTAACCTTCTCTAACGAATTGATATGTCGTGACGAAGGTTTACACACT 561673 Query 22633 GATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTT--CCATATGAAACTG 22690 |||||||||||| | | | || | ||||| | ||| ||| ||| ||| Sbjct 561672 GATTTTGCGTGTTTATTGT-------TC-TCTCATTTACAAAACAGACCAGATG---CTG 561624 Query 22691 TACTTGAT------ATTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCGAGG 22744 | ||| | |||||||| | || ||||| | ||| ||| || ||| | Sbjct 561623 TTATTGTTGAAAGAATTATTACTGAAGCTGTTGAGATCGAAAAGGAATTCTTTGTCGACG 561564 Query 22745 CGTTACCAGTAAGTCTCATT-GGTATCAATGCCGAATCAATGAGTACATATATTAAATTT 22803 | |||||| | || ||| ||||| || | | |||| || |||| || ||||| Sbjct 561563 CTTTACCAATCTC-CTTATTAGGTATGAACTGTAACTTAATGTGTCAATATGTTGAATTT 561505 Query 22804 GTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATCCA 22863 ||||| ||| | |||| || | || ||| | |||| || |||||| ||| ||| Sbjct 561504 GTTGCTGATAGATTATTGGTTGCGCTAGGTAACAAAAAGGTCTACAACGTCACTAACCCA 561445 Query 22864 TTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTT 22923 || || | |||||| ||||| | | || |||||||| ||||||||||| ||||| Sbjct 561444 TTCGATTTCATGGAAAACATTTCTTTAGCCGGTAAGACCAACTTCTTCGAAAAGAGAGTC 561385 Query 22924 GGTGAATACCAAAAAGCAGGTGTTATGG 22951 |||| ||||| || || ||||| |||| Sbjct 561384 AGTGATTACCAGAAGGCTGGTGTCATGG 561357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303350377050926