Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq103 147 6e-30
>seq103
Length=904190
Score = 147 bits (162), Expect = 6e-30
Identities = 504/772 (65%), Gaps = 28/772 (4%)
Strand=Plus/Minus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
||||| |||| ||||||| | | |||||||| || | || ||||| |||||||||
Sbjct 449460 TTCACCCACGGTTCGCCAACCTTATTTAATGCTGGTACCCCTAGCCCACAAATGTCTTCT 449401
Query 363607 TGCTTTCTT-CTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665
|| |||||| | |||||||| || ||||| || ||||||| ||||| | ||||
Sbjct 449400 TG-TTTCTTAGTTGCTATGAAGGATGACTCCATTGACGGTATCTACGACACCTTGAAGAC 449342
Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCG-TG 363724
|||||| | |||||||||| |||||| || |||||| || || ||||| |||| |
Sbjct 449341 GTGTGCTTTGATTTCCAAGAGTGCAGGTGGCATTGGTTTACACATTCACAACATTCGTTC 449282
Query 363725 CACAGAACAGTTACATTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTT 363783
||| | | |||||| ||| || || ||| || ||||| | |||| ||| ||
Sbjct 449281 CACTG-GTACTTACATCGCCGGTACCAACGG-TACTTCTAATGGTATCATTCCAATGGTT 449224
Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843
||||| ||| |||| || || | || || || || ||||| ||| | || ||
Sbjct 449223 CGTGTTTTTAACAACACCGCTCGTTATGTGGATCAAGGTGGTAACAAGAGACCTGGTGCC 449164
Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA- 363902
|||||| | || | || ||| ||||| ||||| || || || | || || | ||
Sbjct 449163 TTTGCTCTTTACTTGGAACCTTGGCATGCGGATATATTCGACTTCATAGATATCAGAAAG 449104
Query 363903 AAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGA 363962
|| ||| || ||||| ||| | || | ||| | ||| || | ||| || ||||
Sbjct 449103 AATCAC-GGCAAAGAAGAAAATAGAGCTAGAGATTTATTCCCGGCCTTATGGATTCCTGA 449045
Query 363963 CCATTTTATGAAGCGCGTGGAGGCA---GGTAAGAATTGGTCACTCTTTTGCCCACACGA 364019
|| |||||| | || || | ||| | ||| || | || | ||| ||||
Sbjct 449044 TTTATTCATGAAGAGAGTTGAACAAAACGGT---GACTGGACATTATTCTCTCCAAACGA 448988
Query 364020 ATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGA 364079
| ||||||| | || ||||| | ||||| || | | | ||||| || || ||
Sbjct 448987 AGCTCCAGGTTTATCAGATGTCTATGGTGATGAATTCGAAGAATTATACTCCAAATACGA 448928
Query 364080 ATCGGAGGGAAAGGCTCGTAAGAC---AATTCCCGCACAGAAGCTATGGTTTGCCATCAT 364136
| | | ||| | ||| | ||| || || || |||||| || ||| |
Sbjct 448927 A---AAAGAAAACCGTGGTAGATCTGTTATTAAGGCTCAAAAATTATGGTACGCGATCTT 448871
Query 364137 GGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAA 364196
|||| | || | ||| || || || || | |||||| || || ||| | || ||| ||
Sbjct 448870 GGATGCACAAACTGAAACCGGTACTCCATTTATGTTATATAAGGATGCTTGTAACAAGAA 448811
Query 364197 GTCCAACCAGCAGCACCTTGGTA----CAATTCAGCAGAGCAACCTATGTACCGAGATTA 364252
| |||| || || || | |||| ||| ||| | ||| | ||| ||||||
Sbjct 448810 GACCAATCAAAAGAACTTAGGTATCATCAAATCATC----TAACTTGTGTTGTGAGATTG 448755
Query 364253 TTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGC 364304
|||||||| | || || || || ||| || |||||| | || || || ||
Sbjct 448754 TTGAATACTCTGCGCCTGATGAAGTTGCTGTTTGTAACTTGGCTTCTATTGC 448703
Score = 132 bits (146), Expect = 1e-25
Identities = 485/748 (65%), Gaps = 30/748 (4%)
Strand=Plus/Minus
Query 22219 GCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTGCATCT 22278
|| || |||||| | | |||||||| || || || | || ||||| | ||
Sbjct 562089 GCGTTTTTTGCTGCTTCTGACGGTATTGTCAACGAAAACTTGGTTGAAAATTTCTCTGCT 562030
Query 22279 GAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATGTT 22338
||| | ||| |||||| |||| |||||||||||| | ||||| ||||| ||||| ||
Sbjct 562029 GAAGTCCAAACCCCAGAAGCCAAGTGTTTCTATGGTTTCCAAATCATGATGGAAAACATT 561970
Query 22339 CACGCGGAAACATATTCTATGATGCTACAGTCACT--CGTAGAAGATAAAGACGAACAAC 22396
||| | || || || || | | || | |||| | | ||||| | | ||| |
Sbjct 561969 CACTCTGAGACTTACTCGTTACT--TATCGACACTTACATCAAAGATCCAAAGGAAGC-C 561913
Query 22397 GAAA-CTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGGGCG 22455
|| |||||| || || | ||||| | || ||||| ||||| || |||||
Sbjct 561912 GATTTCTTATTTAATGCTATCGATAACATTCCTTGTATCAAGAAGAAGGCCGACTGGGCT 561853
Query 22456 CTGAAATGGATGAACAATGA--ACG-TTCATTCGCGGAACGTCTTATTGCATTTGCTGTG 22512
| | |||||| ||| | || ||| || ||| | ||| | | |||| || ||||
Sbjct 561852 TTAAGATGGATCAACGACGACGACGCTTTATTTGGTGAAAGATTAGTTGCTTTCGCTGCT 561793
Query 22513 GTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCA 22572
|| ||||| || ||||| ||| | ||| | || || ||| | || || | |
Sbjct 561792 GTCGAAGGTATCTTCTTCAGTGGTTCGTTTGCCTCCATTTTCTGGTTGAAGAAGAGAGGT 561733
Query 22573 ATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACC 22632
| ||||| ||| |||| || || || || || || | || || || ||| | || ||
Sbjct 561732 TTGATGCCTGGTTTAACCTTCTCTAACGAATTGATATGTCGTGACGAAGGTTTACACACT 561673
Query 22633 GATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTT--CCATATGAAACTG 22690
|||||||||||| | | | || | ||||| | ||| ||| ||| |||
Sbjct 561672 GATTTTGCGTGTTTATTGT-------TC-TCTCATTTACAAAACAGACCAGATG---CTG 561624
Query 22691 TACTTGAT------ATTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCGAGG 22744
| ||| | |||||||| | || ||||| | ||| ||| || ||| |
Sbjct 561623 TTATTGTTGAAAGAATTATTACTGAAGCTGTTGAGATCGAAAAGGAATTCTTTGTCGACG 561564
Query 22745 CGTTACCAGTAAGTCTCATT-GGTATCAATGCCGAATCAATGAGTACATATATTAAATTT 22803
| |||||| | || ||| ||||| || | | |||| || |||| || |||||
Sbjct 561563 CTTTACCAATCTC-CTTATTAGGTATGAACTGTAACTTAATGTGTCAATATGTTGAATTT 561505
Query 22804 GTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATCCA 22863
||||| ||| | |||| || | || ||| | |||| || |||||| ||| |||
Sbjct 561504 GTTGCTGATAGATTATTGGTTGCGCTAGGTAACAAAAAGGTCTACAACGTCACTAACCCA 561445
Query 22864 TTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTT 22923
|| || | |||||| ||||| | | || |||||||| ||||||||||| |||||
Sbjct 561444 TTCGATTTCATGGAAAACATTTCTTTAGCCGGTAAGACCAACTTCTTCGAAAAGAGAGTC 561385
Query 22924 GGTGAATACCAAAAAGCAGGTGTTATGG 22951
|||| ||||| || || ||||| ||||
Sbjct 561384 AGTGATTACCAGAAGGCTGGTGTCATGG 561357
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303350377050926
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |