Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq141 140 3e-28 seq101 129 5e-25 >seq141 Length=295507 Score = 140 bits (154), Expect = 3e-28 Identities = 171/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || |||||| | || || ||||||||||| || || | |||||| | ||||| ||| | Sbjct 197562 AATATGCAAATCTTCGTTAAAACATTAACAGGTAAGACCATTACCTTAGAAGTTGAGTCA 197503 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 |||||||| || | ||||| |||||| ||||| ||||| || || || ||| Sbjct 197502 TCAGACACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCGCCAGAT 197443 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTA 24166 ||||||||| | |||| | ||| |||||| | ||||||| ||||| | | | | ||||| Sbjct 197442 CAACAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAA-CATTATCTGATTA 197384 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || ||||| ||||| ||| | || || || ||||||||||| || || Sbjct 197383 CAATATCCAAAAGGAATCCACATTACACTTGGTCTTAAGATTGAGGGGTGG 197333 Score = 129 bits (142), Expect = 5e-25 Identities = 171/235 (73%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || || || || | |||||| | ||||| ||| | Sbjct 197103 ATGCAAATTTTCGTCAAGACTTTGACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCA 197044 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| |||||| ||||| ||||| || || || || ||| Sbjct 197043 GACACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 196984 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 |||||| | |||| | ||| |||||| | ||||||| ||||| | | | | ||||| || Sbjct 196983 CAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAA-CATTATCTGATTACAA 196925 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAA 24224 || ||||| ||||| ||| | || || || |||||||||||||| || | |||| Sbjct 196924 TATCCAAAAGGAATCCACATTACACTTGGTCTTAAGATTGAGAGGTGGTCAATAA 196870 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || || || || | |||||| | ||||| ||| | Sbjct 197331 ATGCAAATTTTCGTCAAGACTTTGACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCA 197272 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| |||||| ||||| ||||| || || || |||||| Sbjct 197271 GACACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCGCCAGATCAA 197212 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 |||||| | |||| | ||| |||||| | ||||||| ||||| | | | | ||||| || Sbjct 197211 CAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAA-CATTATCTGATTACAA 197153 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||| ||||| ||| | || || || ||||||||||| || || Sbjct 197152 TATCCAAAAGGAATCCACATTACACTTGGTCTTAAGATTGAGGGGTGG 197105 >seq101 Length=125820 Score = 129 bits (142), Expect = 5e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 |||||||||| | || || || || |||||||| || | |||||| | ||||| || | Sbjct 105477 CAAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATC 105418 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 |||||||| || | ||||| ||||| ||||||||||| || || || || Sbjct 105417 TTCGGACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAAGAAGGTATTCCACCTGA 105358 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 |||||| ||| | || | || || |||||| | ||||||| |||| | | ||||| Sbjct 105357 TCAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGATTA 105298 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||||||||| ||||| || | || || || |||||||| ||||| || Sbjct 105297 CAACATTCAAAAGGAATCCACTTTACACTTGGTCTTAAGATTAAGAGGTGG 105247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429934988709915