Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq101 107 2e-18 seq141 93.3 4e-14 >seq101 Length=125820 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 |||||||||||||| ||||| || | || || || ||||||||| | ||| || || Sbjct 105476 AAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCT 105417 Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 ||||| ||| |||| || || || || || |||||||| | || ||| Sbjct 105416 TCGGACACCATTG-ACAATGTCAAGTCTAAGATCCAAGACAAAGAAGGTATTCCACCTGA 105358 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 ||| |||||| | || | || || || ||||||||||||| | |||| | | ||||| Sbjct 105357 TCAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGATTA 105298 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||||| || || ||| |||| |||| || ||||| |||| || Sbjct 105297 CAACATTCAAAAGGAATCCACTTTACACTTGGTCTTAAGATTAAGAGGTGG 105247 >seq141 Length=295507 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| ||||| || | || || || ||||||||| | ||| ||||| Sbjct 197103 ATGCAAATTTTCGTCAAGACTTTGACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCA 197044 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| |||| || || || ||| || || ||||| | || || || Sbjct 197043 GACACCATTG-ACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCA 196985 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || ||| | |||| ||| || || ||||||||||||| || ||| | | ||||| || Sbjct 196984 ACAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATTACAA 196925 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || ||||| || || || |||| |||| || |||||| |||| || Sbjct 196924 TATCCAAAAGGAATCCACATTACACTTGGTCTTAAGATTGAGAGGTGG 196877 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| ||||| || | || || || ||||||||| | ||| ||||| Sbjct 197331 ATGCAAATTTTCGTCAAGACTTTGACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCA 197272 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| |||| || || || ||| || || ||||| | || ||||| Sbjct 197271 GACACCATTG-ACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCGCCAGATCA 197213 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || ||| | |||| ||| || || ||||||||||||| || ||| | | ||||| || Sbjct 197212 ACAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATTACAA 197153 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || ||||| || || || |||| |||| || |||||| | || || Sbjct 197152 TATCCAAAAGGAATCCACATTACACTTGGTCTTAAGATTGAGGGGTGG 197105 Score = 93.3 bits (102), Expect = 4e-14 Identities = 162/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 115281 TAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGT 115340 |||| |||||||| || || ||||| | || || || ||||||||| | ||| |||| Sbjct 197564 TAAATATGCAAATCTTCGTTAAAACATTAACAGGTAAGACCATTACCTTAGAAGTTGAGT 197505 Query 115341 CCAGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTT 115399 | ||||| ||| |||| || || || ||| || || ||||| | || Sbjct 197504 CATCAGACACCATTG-ACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCGCCA 197446 Query 115400 GATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGAT 115459 ||||| || ||| | |||| ||| || || ||||||||||||| || ||| | | ||| Sbjct 197445 GATCAACAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGAT 197386 Query 115460 TATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || || || ||||| || || || |||| |||| || |||||| | || || Sbjct 197385 TACAATATCCAAAAGGAATCCACATTACACTTGGTCTTAAGATTGAGGGGTGG 197333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425342999511160