Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq119 140 2e-28
seq141 114 9e-21
seq101 114 9e-21
>seq119
Length=8276
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 6817 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 6758
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 6757 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 6723
Score = 104 bits (114), Expect = 2e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||| |
Sbjct 4845 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCACTGTACTTGTTCGCTATCGGTCTCTC 4786
Query 20007 GGTAATATTTAGCCTTA 20023
| |||||||||| |||
Sbjct 4785 GCCAATATTTAGCTTTA 4769
>seq141
Length=295507
Score = 114 bits (126), Expect = 9e-21
Identities = 165/233 (71%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| ||||| | || ||||| || | ||| |||||||| |||||||||||||
Sbjct 197331 TACCACCCCTCAATCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAG 197390
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| || | | || |||||||| || |||||||| |||| | |||||||| | |
Sbjct 197391 ATAATGTTCTGCCATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGATCTGGCG 197450
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | ||||| ||||| ||| || ||| || || | | || ||| ||||
Sbjct 197451 GAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAA 197510
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321
||||||| ||||| || ||||| || || ||||| ||||| || ||||| |||
Sbjct 197511 CTTCTAAGGTAATGGTCTTACCTGTTAATGTTTTAACGAAGATTTGCATATTT 197563
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| ||||| | || ||||| || | ||| |||||||| |||||||||||||
Sbjct 197103 TACCACCCCTCAATCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAG 197162
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| || | | || |||||||| || |||||||| |||| | |||||||| | |
Sbjct 197163 ATAATGTTCTGCCATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGATCTGGCG 197222
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | ||||| ||||| ||| || ||| || || | | || ||| ||||
Sbjct 197223 GAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAA 197282
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
||||||| ||||| || ||||| ||||| || || ||||| || |||||
Sbjct 197283 CTTCTAAGGTAATGGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 197331
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
|||||||||||| | || ||||| || | ||| |||||||| ||||||||||||||
Sbjct 196876 ACCACCTCTCAATCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGA 196935
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
|| | | || |||||||| || |||||||| |||| | ||||| || | ||
Sbjct 196936 TAATGTTCTGCCATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGGTCTGGTGG 196995
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
| ||||| ||||| ||| || ||| || || | | || ||| |||||
Sbjct 196996 AATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAAC 197055
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||||| ||||| || ||||| ||||| || || ||||| || |||||
Sbjct 197056 TTCTAAGGTAATGGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 197103
>seq101
Length=125820
Score = 114 bits (126), Expect = 9e-21
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
||||||||| || | || ||||| || | |||| ||||||||||| |||||||||||
Sbjct 105246 ACCACCTCTTAATCTTAAGACCAAGTGTAAAGTGGATTCCTTTTGAATGTTGTAATCAGA 105305
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
|| | | || |||||||| || || || || |||| | ||||||||| | ||
Sbjct 105306 TAAGGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGG 105365
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
| ||||||||||| || || ||| ||||| | | || || | ||||||
Sbjct 105366 AATACCTTCTTTGTCTTGGATCTTAGACTTGACATTGTCAATGGTGTCCGAAGATTCAAC 105425
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|||||| ||||| || ||||| || || || || ||||| || ||||| ||
Sbjct 105426 TTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTT 105476
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334946412141383
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |