Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq103 432 5e-116 seq138 145 1e-29 >seq103 Length=904190 Score = 432 bits (478), Expect = 5e-116 Identities = 1162/1759 (66%), Gaps = 31/1759 (2%) Strand=Plus/Plus Query 61967 ATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTT 62026 || || ||||| | ||||| |||||| ||||| || | || || |||||||| | Sbjct 447908 ATGTGAATATTTAACGATTGTGATTGATCAATGAATGCCGCTCTATCAGCAGCCATATCG 447967 Query 62027 ATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGG 62085 ||||| |||||| | ||||||||||| || ||||| || | | ||| || || || Sbjct 447968 ATAATATGCTTTTGAGAAATTTCCCAAACGGTCTTATATAAGGCTTTCAAT-TCATCGGG 448026 Query 62086 AAGGTTTG-TAT--TCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATC 62142 || ||| | || | ||||| || || | | ||||| | ||||| || ||||| Sbjct 448027 AATGTTAGGTAAGGTTTGAATAGAACCGTTGTTGGAGATAATGTTGTTCTTCATATCATC 448086 Query 62143 ATTCCATAATTTTCTCTCGGTTAAAACTC-TAAGGAGATGCGGATTAACTACTTGAAATT 62201 ||||| | | || ||| | | ||| || | || || || | |||||||| Sbjct 448087 GTTCCAGATACCTAAATCCACCAAATCACGTAATAAG-TATGGGTTGACAATTTGAAATT 448145 Query 62202 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTAT 62261 | |||| ||| ||||| | || ||||||||| || || ||||| | | | ||||| | Sbjct 448146 CACCAGCCAAAACTCTTCTAGAGTAAATATTTGAAGTGTATGGTTCGAAACATTCATTGT 448205 Query 62262 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 62321 | || |||||||||| ||| || ||||| ||||| || || || ||||| ||||| | Sbjct 448206 TCCCTAAAATTTGAGAAGTGGAAGCAGTTGGCATCGGAGCAACTAATAAGGAGTTTCTGA 448265 Query 62322 GACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAA 62381 ||||| | | | || | || | || ||||| | ||| | || | || Sbjct 448266 TACCGTGTTTGGCCAAGTTTTGCTTCAAAGTATCCCAGTCCCATAATTCAGTTGGCTTTC 448325 Query 62382 CNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGT 62441 ||||| | ||| ||| || || ||| ||||||| | || Sbjct 448326 TTTCCCACAAGTCAAATTGTAAGACACCCTTAGATGCTGGAGAACCTTCATATGTTTGGT 448385 Query 62442 ATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTT 62501 | || ||||| | ||||| | |||| || || | ||||||| |||||||||| Sbjct 448386 ACGGGCCTTCGATTTCAGCCAATTCAATGGATGCTTCCACAGCACCGTGGTAAATGGTTT 448445 Query 62502 CGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAGA- 62560 | || || | | |||| |||| ||||| | |||||||| |||| | | | Sbjct 448446 CAAAAATTTGGGTGTTTAATTCTTTAGCTTCTTGAGAGTCAAATGG-TAATCTCAATGCC 448504 Query 62561 ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 62620 ||||| || || ||||| ||||||||||| | | || ||||| | |||| | || ||| Sbjct 448505 ATAAAAGCATCGGCTAAACCTTGAACACCTAAGGCAATTGGTCTGTTTCTCATGTTCGAG 448564 Query 62621 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC---TG 62677 | ||||||||||| || || || ||| || |||||| |||| | || | | Sbjct 448565 TTCCTAGCTTCTGGAACTGGGTAGTAGTTACGGTCGATAATTCTATTTAAGTTACGCGTC 448624 Query 62678 ACAATTACTTTGACCACATCCT-TCAGTTTGAGAAA----ATCAAATCGC----CCATCT 62728 |||| ||| | || || | | | ||| |||| | ||| | | | ||| Sbjct 448625 ACAAC--CTTAGTA-ACTTCATGTAACTTTTCGAAATCGTACCAACTGGAGGTACTGTCT 448681 Query 62729 ATTACAA-ACATGTTC--AATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCA 62785 || ||| | ||| | || |||| ||| |||| |||||||| || || |||| || Sbjct 448682 CTTTCAACAAATGATGGTAAGGCAATAGAAGCCAAGTTACAAACAGCAACTTCATCAGGC 448741 Query 62786 TCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGT 62845 | | |||| | |||||| || | ||| | |||||| | ||||| || | | Sbjct 448742 GCAGAGTATTCAACAATCTCACAACACAAGTTAGATGATTTGATGATACCTAAGTTCTTT 448801 Query 62846 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 62905 ||||| |||| |||||||| ||||||||||| | || ||||||||||| |||||| | Sbjct 448802 TGATTGGTCTTCTTGTTACAAGCATCCTTATATAACATAAATGGAGTACCGGTTTCAGTT 448861 Query 62906 TGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTT 62965 || | || | ||||| | ||| | | ||||||| || | |||| | | ||| Sbjct 448862 TGTGCATCCAAGATCGCGTACCATAATTTTTGAGCCTTAATAACAGATCTACCACGGTTT 448921 Query 62966 TCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCA 63025 ||| |||||||| | || ||| |||||| || || || | |||| | || Sbjct 448922 TCTTTTTCGTATTTGGAGTATAATTCTTCGAATTCATCACCATAGACATCTGATAAACCT 448981 Query 63026 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 63085 ||| ||| | ||| | | || | ||| || |||| | | |||| ||||| || Sbjct 448982 GGAGCTTCGTTTGGAGAGAATAATGTCCAGTCACCGTTTTGTTCAACTCTCTTCATGAAT 449041 Query 63086 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTA 63145 | |||||||||||| | || |||| |||||| | ||||| ||| || || || | Sbjct 449042 AAATCAGGAATCCATAAGGCCGGGAATAAATCTCTAGCTCTATTTTCTTCTTTGCCGTGA 449101 Query 63146 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 63205 |||||| | | ||| | ||| | | ||||| | |||||| ||||||||||| | || Sbjct 449102 TTCTTTCTGATATCTATGAAGTCGAATATATCCGCATGCCAAGGTTCCAAGTAAAGAGCA 449161 Query 63206 ATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 63265 | | ||||| | ||||| || || ||||| | || | ||||||||| ||| |||| Sbjct 449162 AAGGCACCAGGTCTCTTGTTACCACCTTGATCCACATAACGAGCGGTGTTGTTAAAAACA 449221 Query 63266 CTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTG 63325 | | ||||||||| |||||||| || ||||| ||||| || | ||| || | ||| || Sbjct 449222 CGAACCATTGGAATGATACCATTAGAAGTACCGTTGGTACCGGCGATGTAAGTACCAGTG 449281 Query 63326 GCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCAT 63385 | |||||| || ||| || ||| || || ||||| | || || || || || || Sbjct 449282 GAACGAATGTTGTGAATGTGTAAACCAATGCCACCTGCACTCTTGGAAATCAAAGCACA- 449340 Query 63386 CGT-TTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACA 63444 ||| || || || || ||||| || || || |||||| |||| || || ||||| Sbjct 449341 CGTCTTCAAGGTGTCGTAGATACCGTCAATGGAGTCATCCTTCATAGCAACTAAGAAACA 449400 Query 63445 GCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAA 63504 ||||||||| | | | || || |||||||||||||| || ||| |||| || || Sbjct 449401 AGAAGACATTTGTGGGCTAGGGGTACCAGCATTAAATAAGGTTGGCGAACCGTGGGTGAA 449460 Query 63505 CCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAA 63563 || ||| || | | ||||||| || | || || ||||| || | || | Sbjct 449461 GTATCTTTGGGACATCATGTTGTACGATTCGACGACTCTCTCGATATCGTCACCG-TGTA 449519 Query 63564 TTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTT 63623 | || || || || | ||| | || || || |||||||| | | ||| ||| ||| Sbjct 449520 TACCAACAGCAACTCTCATAATCAAATGTTGTGGTCTTTCGGCAACCTTACCGTTGATTC 449579 Query 63624 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTT 63683 |||||||||| ||| |||||||||| || || || || |||||||| ||| || || | Sbjct 449580 TCAACAAGTAAGATCTTTCCAAAGTCTTGAATCCGAAGTAGTTGTAATTAAAATCACGGT 449639 Query 63684 CGTAAATAATAACCGAGTT 63702 | | | ||| ||||||| Sbjct 449640 CAAATACAATTGCCGAGTT 449658 Score = 201 bits (222), Expect = 1e-46 Identities = 584/888 (66%), Gaps = 26/888 (3%) Strand=Plus/Plus Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429 || ||||| |||| || | |||||||| || || || ||||| |||| || || ||| Sbjct 561371 TTCTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCTAAAGAAATGTTT 561430 Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 32489 ||||||||||||||||| || || || || || | ||||| || | || | Sbjct 561431 TCCATGAAATCGAATGGGTTAGTGACGTTGTAGACCTTTTTGTTACCTAGCGCAACCAAT 561490 Query 32490 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TAAG 32548 |||||||| || |||||||| | |||| ||| | | ||| ||||| |||| |||| Sbjct 561491 AATCTATCAGCAACAAATTCAACATATTGACACATTAAGTTACAGTTCATACCTAATAAG 561550 Query 32549 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 32608 | ||| | ||| | || ||||| | ||| || || || || || ||||| Sbjct 561551 GAGAT-TGGTAAAGCGTCGACAAAGAATTCCTTTTCGATCTCAACAGCTTCAGTAATAAT 561609 Query 32609 AGATCTT---ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 32665 |||| || | | || ||| | |||||| |||| ||||| || Sbjct 561610 ---TCTTTCAACAATAACAGCATCTGGTCTGTTTTGTAAATGAGAGAACAATAAACACGC 561666 Query 32666 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 32725 ||||| ||||| ||| ||||| | || || |||||||| || || || | || || Sbjct 561667 AAAATCAGTGTGTAAACCTTCGTCACGACATATCAATTCGTTAGAGAAGGTTAAACCAGG 561726 Query 32726 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 32785 ||| | || | ||| || | ||| || ||||| ||||| || ||| ||||| || || Sbjct 561727 CATCAAACCTCTCTTCTTCAACCAGAAAATGGAGGCAAACGAACCACTGAAGAAGATACC 561786 Query 32786 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCA 32842 ||| || || || || |||| | ||| || ||| | | || || ||| | ||||| Sbjct 561787 TTCGACAGCAGCGAAAGCAACTAATCTTTCACCAAATAAAGCGTCGTCGTCGTTGATCCA 561846 Query 32843 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 32902 || |||||| ||||||||||| || | |||||| || | || ||||||||||| | Sbjct 561847 TCTTAAAGCCCAGTCGGCCTTCTTCTTGATACAAGGAATGTTATCGATAGCATTAAATAA 561906 Query 32903 ATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA-TACATTTCCG 32961 | | ||| || |||||| | || || || || | | || | || | || | Sbjct 561907 GAAATCGGCTTCCTTTGGATCTTTGATGTAAGTGTCGATAAGTA-ACGAGTAAGTCTCAG 561965 Query 32962 AATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTA 33021 | ||||||||||| || ||||| || || ||||| || | || || | | || | Sbjct 561966 AGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCTGGGGTTTGGA 562025 Query 33022 CTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA 33081 |||| | | | || ||| | || ||||| || || || |||||| || ||||||| Sbjct 562026 CTTCAGCAGAGAAATTTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGCAGCAAAAA 562085 Query 33082 ACGCCAATACATGTTTT----ATAAAATATTTTTCGTCTGGTGTT-AGTTT---ATTCCA 33133 ||||||| | || | || || ||| |||| | || |||| | ||| ||||| Sbjct 562086 ACGCCAAGA----TTCTGGAAATGAAGTATCTTTCAT-TGTTGTTCAATTTTTCGTTCCA 562140 Query 33134 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 33193 || | |||| ||| | || | |||||| | ||||| || || || || || || Sbjct 562141 GTCTTGTGTATCCTTACCCAAGTCGATTTCTTCGGCGGTCCAGAAGGACGCTTCGGCTTT 562200 Query 33194 TTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241 || ||||| | ||| || || || || | ||||| || | ||| || Sbjct 562201 CTTGTACATTTGCCAAATTTCGTGGTACTTGATTGGGAACAAAACGAA 562248 >seq138 Length=177124 Score = 145 bits (160), Expect = 1e-29 Identities = 711/1116 (64%), Gaps = 33/1116 (3%) Strand=Plus/Plus Query 62569 GTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGA---TTTC 62625 ||| |||| ||||||||||| ||| | |||||||||| | || |||| || || | Sbjct 79169 GTCAGCTAGACCTTGAACACCGATAGCAATAGGTCTATTTTTCATATTCGATTGCCTTGC 79228 Query 62626 AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTAC 62685 | ||| |||||| || | ||| ||| ||||||||||| | |||| | | | ||| Sbjct 79229 ACTTTC---AATAGGGTATTTGGTAACATCAATAATTTTATTCAAATTTTTCGCTAGTAC 79285 Query 62686 TTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTATTACAAAC-------A 62738 | | || | ||||| ||| |||||| || || || | | Sbjct 79286 TCTAGTTACTGAATGAAGTTTATCAAAGTCAAATTCTAATTCCTTTCCACTCTTAATGAA 79345 Query 62739 TGTTC--AATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTG 62796 ||| ||||| | || | | ||||||||| || || | | || ||||| Sbjct 79346 TGTAGGTAATGCTAATGAGCCTAAATTACAAACAGCAGTTTCTTCTGGTGACGAATATTC 79405 Query 62797 TATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTT 62856 | |||||| ||||| ||| |||| || ||||||||||| ||||| || || Sbjct 79406 AACAATCTCACAACAAAGGTTAGATGACTTAATAGTTCCTAAATTCTGTTGGTTTGATTT 79465 Query 62857 TTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTAT 62916 ||||| ||||| || || | ||| | ||| |||||||| | ||| |||||| Sbjct 79466 CAGATTACATGCATCTTTGTACAACATGTACGGACCTCCAGTTTCGGTTTGACATTCTAG 79525 Query 62917 AATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT--TCG 62974 |||| ||| | | |||| || | || || || ||| || | | || Sbjct 79526 TATCGAACGCCATAATTTTTGAGCTTTGAC---AGTCTT-TACTGCTTGTCCCGTGTTCT 79581 Query 62975 TATAGTGT--ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATT 63032 ||| | | ||| | | | ||| |||||||| || || | | |||||| | | Sbjct 79582 CATACTTTTCATAGAGTTCTCTGAAATCGTCTCCATAACAATCGCTTAATCCAGGGGAGT 79641 Query 63033 CATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAG 63092 ||| ||| | | | |||||| ||| || | || |||| | |||||| | ||| | Sbjct 79642 TATCTGGAGAAAATAGCGACCAATCTAAATCTTGTTTTACTCTCTCCATAAATAAATCTG 79701 Query 63093 GAATCCAAAGAGCTATAAA-TAGATCTCTGGTTCTATGTTCCTCGTTTCC-TGTATTCTT 63150 | ||||| | | | ||||| || ||| | || ||| ||| || || || || || | Sbjct 79702 GTATCCATA-ATCCATAAAATAAATCACGGGCTCTCATTTCTTCTTTCCCGTGGTTTTTC 79760 Query 63151 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAAC 63210 || ||| | | || | ||||||| | ||||| ||||| | ||||| || | | | Sbjct 79761 TTCAAGTCCAATACACTGAA-AATATCACAGTGCCATGGTTCAAGATATATCGCAAAAGC 79819 Query 63211 TCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAA 63270 ||| || | |||||| || |||||||| | |||||| || || || || | ||||| | Sbjct 79820 TCCTGGTCTTTTGTTACCACCCTGATCGACGTATCTCGCTGTATTGTTGAAGACTCTTAG 79879 Query 63271 CATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACG 63330 ||| |||| | |||| | ||||||||||| | | || || || ||||| |||| Sbjct 79880 CATAGGAACTAAACCACTTGATGTACCATTTGAACTAGATATGTATGAGCCACTTCCACG 79939 Query 63331 AATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTT 63390 || ||| || ||| || |||||||| | ||| || ||||| || || | Sbjct 79940 AACGTTATGAACATGTAGTCCAATTCCCCCGGATGCTTTTGAAATTAAGGCTGATTTATG 79999 Query 63391 TAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGA 63450 ||| || | ||| || || ||||| |||||| |||| ||||| ||| || ||| Sbjct 80000 TAATGTTTTATAAATACCATCTATTGAATCATCTTCCATGGCAAGTAAAAAGCAAGAAGA 80059 Query 63451 CATTTGGTGACGACT-AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATT 63509 | | || ||| |||||| | ||||||||| |||||||| || ||| | || | | Sbjct 80060 TAAATAGT-TGTACTCAGTTCCAGAATTAAATAATGTAGGAGACGCATGAATGAAATACT 80118 Query 63510 TTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTG--ATGAATTCC 63567 | | || | | | || || ||||| || ||| |||| ||||| || || || Sbjct 80119 TCTGCGACATCAATTCATATGTTTCAATCGCGCTGTCAATAT--CATTGCCGTGGATGCC 80176 Query 63568 TACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAA 63627 || || || | | ||||| ||| || ||||| | | | || | || ||| || Sbjct 80177 TAACGCCACTCTTAAGAACATAAACTGTGGAGTTTCACTGGTAGTATTATCTAATTTTAA 80236 Query 63628 CAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATA 63663 || || || || | || || || | |||||||| Sbjct 80237 TAAATAAGAATTCTGTAATGTCTTTATTCCAAAATA 80272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633630471362800