Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq141 143 2e-29
seq101 134 1e-26
>seq141
Length=295507
Score = 143 bits (158), Expect = 2e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||||||||| ||||| |||| || | ||||| ||||| ||
Sbjct 197103 ATGCAAATTTTCGTCAAGACTTTGACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCA 197044
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || | ||| | || | ||| ||||| ||||| |||||||| |||||
Sbjct 197043 GACACCATTGACAACGTCAAGTCCAAGATTCAA-GACAAGGAAGGTATTCCACCAGACCA 196985
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|||| | | ||||||||||| || ||||||||||||| | || | ||||||||
Sbjct 196984 ACAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATTACAA 196925
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||| ||||| |||||||| |||| || || |||| | ||||| ||
Sbjct 196924 TATCCAAAAGGAATCCACATTACACTTGGTCTTAAGATTGAGAGGTGG 196877
Score = 131 bits (144), Expect = 1e-25
Identities = 160/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||||||||| ||||| |||| || | ||||| ||||| ||
Sbjct 197331 ATGCAAATTTTCGTCAAGACTTTGACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCA 197272
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || | ||| | || | ||| ||||| ||||| ||||| || || ||
Sbjct 197271 GACACCATTGACAACGTCAAGTCCAAGATTCAA-GACAAGGAAGGTATTCCGCCAGATCA 197213
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|||| | | ||||||||||| || ||||||||||||| | || | ||||||||
Sbjct 197212 ACAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATTACAA 197153
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAG 25213
||| ||||| |||||||| |||| || || ||||
Sbjct 197152 TATCCAAAAGGAATCCACATTACACTTGGTCTTAAG 197117
Score = 116 bits (128), Expect = 3e-21
Identities = 157/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || || || || || ||||| |||| || | ||||| ||||| ||
Sbjct 197559 ATGCAAATCTTCGTTAAAACATTAACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCA 197500
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || | ||| | || | ||| ||||| ||||| ||||| || || ||
Sbjct 197499 GACACCATTGACAACGTCAAGTCCAAGATTCAA-GACAAGGAAGGTATTCCGCCAGATCA 197441
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|||| | | ||||||||||| || ||||||||||||| | || | ||||||||
Sbjct 197440 ACAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATTACAA 197381
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAG 25213
||| ||||| |||||||| |||| || || ||||
Sbjct 197380 TATCCAAAAGGAATCCACATTACACTTGGTCTTAAG 197345
>seq101
Length=125820
Score = 134 bits (148), Expect = 1e-26
Identities = 169/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| || || |||||||| || ||||| |||| || | ||||| || || ||
Sbjct 105474 AATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTC 105415
Query 25058 TGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| || || || || ||| || ||| ||||||||||| |||||||||||
Sbjct 105414 GGACACCATTGA--CAATGTCAAGTCTAAGATCCAAGACAAAGAAGGTATTCCACCTGAT 105357
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
||||| | | || || || || || ||||||||||||| | | || | ||||||
Sbjct 105356 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGATTAC 105297
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| |||||||| |||||||| |||| || || |||| ||||||| ||
Sbjct 105296 AACATTCAAAAGGAATCCACTTTACACTTGGTCTTAAGATTAAGAGGTGG 105247
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433326980731295
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |