Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq141 143 2e-29 seq101 134 1e-26 >seq141 Length=295507 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||||||||| ||||| |||| || | ||||| ||||| || Sbjct 197103 ATGCAAATTTTCGTCAAGACTTTGACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCA 197044 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | ||| | || | ||| ||||| ||||| |||||||| ||||| Sbjct 197043 GACACCATTGACAACGTCAAGTCCAAGATTCAA-GACAAGGAAGGTATTCCACCAGACCA 196985 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||| | | ||||||||||| || ||||||||||||| | || | |||||||| Sbjct 196984 ACAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATTACAA 196925 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| ||||| |||||||| |||| || || |||| | ||||| || Sbjct 196924 TATCCAAAAGGAATCCACATTACACTTGGTCTTAAGATTGAGAGGTGG 196877 Score = 131 bits (144), Expect = 1e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||||||||| ||||| |||| || | ||||| ||||| || Sbjct 197331 ATGCAAATTTTCGTCAAGACTTTGACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCA 197272 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | ||| | || | ||| ||||| ||||| ||||| || || || Sbjct 197271 GACACCATTGACAACGTCAAGTCCAAGATTCAA-GACAAGGAAGGTATTCCGCCAGATCA 197213 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||| | | ||||||||||| || ||||||||||||| | || | |||||||| Sbjct 197212 ACAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATTACAA 197153 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAG 25213 ||| ||||| |||||||| |||| || || |||| Sbjct 197152 TATCCAAAAGGAATCCACATTACACTTGGTCTTAAG 197117 Score = 116 bits (128), Expect = 3e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || || || || ||||| |||| || | ||||| ||||| || Sbjct 197559 ATGCAAATCTTCGTTAAAACATTAACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCA 197500 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | ||| | || | ||| ||||| ||||| ||||| || || || Sbjct 197499 GACACCATTGACAACGTCAAGTCCAAGATTCAA-GACAAGGAAGGTATTCCGCCAGATCA 197441 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||| | | ||||||||||| || ||||||||||||| | || | |||||||| Sbjct 197440 ACAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATTACAA 197381 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAG 25213 ||| ||||| |||||||| |||| || || |||| Sbjct 197380 TATCCAAAAGGAATCCACATTACACTTGGTCTTAAG 197345 >seq101 Length=125820 Score = 134 bits (148), Expect = 1e-26 Identities = 169/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| || || |||||||| || ||||| |||| || | ||||| || || || Sbjct 105474 AATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTC 105415 Query 25058 TGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || || || ||| || ||| ||||||||||| ||||||||||| Sbjct 105414 GGACACCATTGA--CAATGTCAAGTCTAAGATCCAAGACAAAGAAGGTATTCCACCTGAT 105357 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| | | || || || || || ||||||||||||| | | || | |||||| Sbjct 105356 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGATTAC 105297 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || |||||||| |||||||| |||| || || |||| ||||||| || Sbjct 105296 AACATTCAAAAGGAATCCACTTTACACTTGGTCTTAAGATTAAGAGGTGG 105247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433326980731295