Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq103 273 2e-68 >seq103 Length=904190 Score = 273 bits (302), Expect = 2e-68 Identities = 613/907 (68%), Gaps = 29/907 (3%) Strand=Plus/Plus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 ||| |||||| || ||||| || | ||| | ||||| ||||| || ||||| || | Sbjct 561358 CATGACACCAGCCTTCTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGC 561417 Query 92850 CAAAGATATCGAATTCACT---AGTGATTGGATTCTTGGCGTTATAATACTTTTC---AC 92903 ||||| || | ||| | | || ||| || || |||| || ||||| || Sbjct 561418 TAAAGAAAT-GTTTTCCATGAAATCGAATGGGTTAGTGACGTTGTAGACCTTTTTGTTAC 561476 Query 92904 CGATC--AACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATC 92961 | | | ||| ||||||||||||||| |||||||| | || ||| |||| || | Sbjct 561477 CTAGCGCAAC-----CAATAATCTATCAGCAACAAATTCAACATATTGACACATTAAGTT 561531 Query 92962 ACAATTCATTCCTAG-AAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTA 93020 ||| ||||| |||| ||| | | |||| ||||||| ||||| || || ||||| Sbjct 561532 ACAGTTCATACCTAATAAGGAG-ATTGGTAAAGCGTCGACAAAGAATTCCTTTTCGATCT 561590 Query 93021 CAACGGCTTCTTTCAAGATTTCTATTA-CTCTACTA---TTTGGTGGTTTTTGTACGACA 93076 |||| ||||| | || | |||| | | | || | | |||| ||||||| | Sbjct 561591 CAACAGCTTCAGT-AATAATTCTTTCAACAATAACAGCATCTGGTCTGTTTTGTAA---A 561646 Query 93077 TAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCA 93136 | | | ||| ||| |||||||| || || |||||||||||||| || ||||||| || Sbjct 561647 TGAGAGAACAATAAACACGCAAAATCAGTGTGTAAACCTTCGTCACGACATATCAATTCG 561706 Query 93137 TTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAA 93196 || ||| |||||||| || | || |||| ||||| | ||| || || || ||||| Sbjct 561707 TTAGAGAAGGTTAAACCAGGCATCAAACCTCTCTTCTTCAACCAGAAAATGGAGGCAAAC 561766 Query 93197 CTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTT 93256 |||| || || |||||||| || || || || || || | | ||| |||| Sbjct 561767 GAACCACTGAAGAAGATACCTTCGACAGCAGCGAAAGCAACTAATCTTTCACCAAATAAA 561826 Query 93257 GCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGT 93316 ||| | | |||||||| |||||||||| ||||| || ||||| |||||||| | | Sbjct 561827 GCGTCGTCGTCGTTGATCCATCTTAAAGCCCAGTCGGCCTTCTTCTTGATACAAGG-AAT 561885 Query 93317 GTT-TCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGAT 93375 ||| |||||||| ||||||| | |||| || | | |||| ||||| || ||||| Sbjct 561886 GTTATCGATAGCATTAAATAAGAAATCGGCTTCCTTTGGATCTTTGATGTAAGTGTCGAT 561945 Query 93376 TAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACA 93435 | | || || | ||||| || | || ||||| |||||||| || |||||||| Sbjct 561946 AAGTAACGAGTAAGTCTCAGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACA 562005 Query 93436 TCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTAT 93495 | ||||| | | | || ||||| ||| || | || || | ||||| ||||| || Sbjct 562006 CTTGGCTTCTGGGGTTTGGACTTCAGCAGAGAAATTTTCAACCAAGTTTTCGTTGACAAT 562065 Query 93496 ACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTT 93555 ||| || || || |||||||| ||||| || || || | | | |||| | || Sbjct 562066 ACCGTCAGAAGCAGCAAAAAACGCCAAGATTCTGGAAATGAAGTATCTTTCATTGTTGTT 562125 Query 93556 AAGCTTATC---CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAA 93612 | || || ||| || | ||| || | |||| ||||||| | ||||| || Sbjct 562126 CAATTTTTCGTTCCAGTCTTGTGTATCCTTACCCAAGTCGATTTCTTCGGCGGTCCAGAA 562185 Query 93613 CGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGAC 93672 || ||||| ||||| |||||||| | ||| || || || || | ||||| || | || Sbjct 562186 GGACGCTTCGGCTTTCTTGTACATTTGCCAAATTTCGTGGTACTTGATTGGGAACAAAAC 562245 Query 93673 AAAACGA 93679 |||||| Sbjct 562246 GAAACGA 562252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556859456573320