Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq103 215 6e-51 >seq103 Length=904190 Score = 215 bits (238), Expect = 6e-51 Identities = 896/1399 (64%), Gaps = 25/1399 (2%) Strand=Plus/Plus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 || ||||| | |||||||| || || || |||||||| || || ||||| | ||||| Sbjct 448169 TAAATATTTGAAGTGTATGGTTCGAAACATTCATTGTTCCCTAAAATTTGAGAAGTGGAA 448228 Query 114002 GCTGTGGGCATGGGTGCCA-TGAGAAGGCTGTTACGGAGACCCT-TTTCCCTAATGCGTT 114059 || || ||||| || || | | | |||| ||| | || ||| | ||| | || | || Sbjct 448229 GCAGTTGGCATCGGAGCAACTAATAAGGA-GTTTCTGATACCGTGTTTGGCCAA-GTTTT 448286 Query 114060 CCTTGAGGGCGTCCCAGTCG--TAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTG 114117 ||| | | |||||||| || || || ||| || | | ||||| ||||| || Sbjct 448287 GCTTCAAAGTATCCCAGTCCCATAATTCAG--TTGGCTTTCTTTCCCACAAGTCAAATTG 448344 Query 114118 GAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGC 114177 | || ||| | || ||||| || || ||| |||| | ||| ||||| || | || || Sbjct 448345 TAAGACACCCTTAGATGCTGGAGAACCTTCATATGTTTGGTACGGGCCTTCGATTTCAGC 448404 Query 114178 CAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT 114237 |||||| | || || | || |||| || || || |||||||| | | || | Sbjct 448405 CAATTCAATGGATGCTTCCACAGCACCGTGGTAAATGGTTTCAAAAATTTGGGTGTTTAA 448464 Query 114238 TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACC 114297 | | || || || | || ||||| | | || | ||||| |||| || | ||| Sbjct 448465 TTCTTTAGCTTCTTGAGAGTCAAATGGTAATCTCAATGCCATAAAAGCATCGGCTAAACC 448524 Query 114298 TTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA-CGG 114356 ||| ||||| | | ||||||| | | |||||| || || || | ||| ||| | | | Sbjct 448525 TTGAACACCTAAGGCAATTGGTCTGTTTCTCATGTTCGAGTTCCTAGCT-TCTGGAACTG 448583 Query 114357 GATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCAT 114416 | || | || | ||||||| ||||||| || || |||||||| || | ||||| Sbjct 448584 GGTAGTAGTTACGGTCGATAATTCTATTTAAGTTACGCGTCACAACCTTAGTAACTTCAT 448643 Query 114417 GAAGCTTTTCGTAATCAAA---ACTGCGAG------TCTCTTCATTGACATACTTAGGAA 114467 | | ||||||| |||| | |||| ||| |||||| | ||| | || | Sbjct 448644 GTAACTTTTCGAAATCGTACCAACTG-GAGGTACTGTCTCTT--TCAACAAATGATGGTA 448700 Query 114468 GGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTT 114527 ||| || || |||| ||||| |||| ||||| ||| ||| || | ||| | Sbjct 448701 AGGCAATAGAAGCCAAGTTACAAACAGCAACTTCATCAGGCGCAGAGTATTCAACAATCT 448760 Query 114528 CCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTAC 114587 | |||||| || || || ||| | || |||||||||||||| | ||| |||||| Sbjct 448761 CACAACACAAGTTAGATGATTTGATGATACCTAAGTTCTTTTGATTGGTCTTCTTGTTAC 448820 Query 114588 ACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCT 114647 | |||||||| || | ||| |||| || || || || ||||| | | | || || | Sbjct 448821 AAGCATCCTTATATAACATAAATGGAGTACCGGTTTCAGTTTGTGCATCCAAGATCGCGT 448880 Query 114648 TCCAGACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGT 114707 ||| | | || | | | | | || || | ||||| || | || Sbjct 448881 ACCATAATTTTTGAGCCTTAATAACAGATCTACCACGGTTTTCTTTTTCGTATTTGGAGT 448940 Query 114708 AGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGA 114767 | | |||| || || ||||| | | ||||| | ||||| || | | ||| ||| Sbjct 448941 ATAATTCTTCGAATTCATCACCATAGACATCTGATAAACCTGGAGCTTCGTTTGGAGAGA 449000 Query 114768 AGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAG 114827 | | | ||| | ||| | ||||| | ||||||||| | || || ||||| | | Sbjct 449001 ATAATGTCCAGTCACCGTTTTGTTCAACTCTCTTCATGAATAAATCAGGAATCCATAAGG 449060 Query 114828 CTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 114887 | | ||| | ||| | | | | |||||| | || ||||| | | || | | Sbjct 449061 CCGGGAATAAATCTCTAGCTCTATTTTCTTCTTTGCCGTGATTCTTTCTGATATCTATGA 449120 Query 114888 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTTACGACG- 114945 |||| | |||||||| ||||| ||||||| ||| | || | | ||| | | Sbjct 449121 AGTCGAATATATCCGCATGCCAAGGTTCCAAGTAAAGAGCAAAGGCACCAGGTCTCTTGT 449180 Query 114946 -ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATAC 115004 |||| | || | ||||| | || ||| ||||| || |||| |||||||||||||| Sbjct 449181 TACCACCTTGATCCACATAACGAGCGGTGTTGTTAAAAACACGAACCATTGGAATGATAC 449240 Query 115005 CATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGT 115064 ||| ||| || || || || || || | ||| | | | || |||| Sbjct 449241 CATTAGAAGTACCGTTGGTACCGGCGATGTAAGTACCAGTGGAACGAATGTTGTGAATGT 449300 Query 115065 GCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGA 115124 | | |||||| || ||||| | ||| || || || ||| | | | || |||||| Sbjct 449301 GTAAACCAATGCCACCTGCACTCTTGGAAATCAAAGCACACGTCTTCAAGGTGTCGTAGA 449360 Query 115125 TCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTG 115184 | ||||| || |||||| |||| | || | | ||| || ||||||||||| || | Sbjct 449361 TACCGTCAATGGAGTCATCCTTCATAGCAACTAAGAAACAAGAAGACATTTGTGGGCTAG 449420 Query 115185 GTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTAT 115244 | |||||||| || || | |||||| | ||||| |||| | |||||||||| | | Sbjct 449421 GGGTACCAGCATTAAATAAGGTTGGCGAACCGTGGGTGAAGTATCTTTGGGACATCATGT 449480 Query 115245 CGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAA 115304 ||| | || | ||| || || || ||||| ||||| | | || | ||||| Sbjct 449481 TGTACGATTCGACGACTCTCTCGATATCGTCACCGTGTATACCAACAGCAACTCTCATAA 449540 Query 115305 ACATGTATTGGGGTGTTTC 115323 || | ||| ||| |||| Sbjct 449541 TCAAATGTTGTGGTCTTTC 449559 Score = 86.0 bits (94), Expect = 7e-12 Identities = 196/291 (67%), Gaps = 12/291 (4%) Strand=Plus/Plus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| | ||| |||||||| | || | ||| || |||||| | || Sbjct 561665 GCAAAATCAGTGTGTAAACCTTCGTCACGACATATCAATTCGTTAGAGAAGGTTAAACCA 561724 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||| | ||| | |||||||||||||||||| | ||| ||||| ||||||||| Sbjct 561725 GGCATCAAACCTCTCTTCTTCAACCAGAAAATGGAGGCAAACGAACCACTGAAGAAGATA 561784 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAAA 126225 || || ||| ||||| |||| | | ||| |||| | ||| | | || || | Sbjct 561785 CCTTCGACAGCAGCGAAAGCAACTAATCTTTCACCAAA-TAAAGCGTCGTCGTCGTTGAT 561843 Query 126226 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA-- 126283 ||| | | ||||| | ||||| |||| |||||| || | | | | ||| || | | Sbjct 561844 CCATCTTAAAGCCCAGTCGGCCTTCTTCTTGATACAAGGAATGTTATCGATAGCATTAAA 561903 Query 126284 -AAGAGTTC--CTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGT 126331 |||| || |||| || ||||||||||||||| | || || ||| Sbjct 561904 TAAGAAATCGGCTTCCTT-----TGGATCTTTGATGTAAGTGTCGATAAGT 561949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352158884440