Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq141 95.1 1e-14 seq101 87.8 2e-12 >seq141 Length=295507 Score = 95.1 bits (104), Expect = 1e-14 Identities = 179/257 (70%), Gaps = 5/257 (2%) Strand=Plus/Plus Query 41955 AAAATATTATATATAT-TAATTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGT 42013 || |||||| |||| ||| |||| |||| ||||| || | || ||||| || ||||| Sbjct 196849 AATATATTAACCATATATAACTTATTGACCACCTCTCAATCTTAAGACCAAGTGTAATGT 196908 Query 42014 GCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGC 42073 | |||||||| ||||||||||||| | || | | || |||| |||||||| || Sbjct 196909 GGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGCCATCTTCTAATTGCTTACCGGC 196968 Query 42074 GAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGA 42132 || || | || ||| ||||| | ||| | | ||||||| | ||| | || | |||| Sbjct 196969 AAAAATTAATCTCTGTTGGTCTGGTGGAATACCTTCCTTGT-CTTGAATCTTGGACTTGA 197027 Query 42133 GCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTC 42191 ||| | | | ||||| || || || || | || ||||| || || || | ||| Sbjct 197028 -CGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAATGGTCTTACCTGTCAAAGTC 197086 Query 42192 TTTACAAAGATTTGCAT 42208 || || || |||||||| Sbjct 197087 TTGACGAAAATTTGCAT 197103 >seq101 Length=125820 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| |||||||| | || ||||| || || ||| ||||||||||| |||||||||| Sbjct 105246 ACCACCTCTTAATCTTAAGACCAAGTGTAAAGTGGATTCCTTTTGAATGTTGTAATCAGA 105305 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 | || | | || |||| |||||||||||||| || | || || || || | ||| Sbjct 105306 TAAGGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGG 105365 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | || ||||| ||| || |||| | | | ||||| ||||| || Sbjct 105366 AATACCTTCTTTGTCTTGGATCTTAGACTTGACATTGTCAATGGTGTCCGAAGATTCAAC 105425 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 || | || ||||| || || |||| ||||| || || ||||||||||| Sbjct 105426 TTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTT 105476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543211489499120