Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq101 107 2e-18
seq141 102 7e-17
>seq101
Length=125820
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 45144 GTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCT 45203
|| ||||||||||| || || ||||| | |||| || ||| || ||||| || ||
Sbjct 105277 GTGGATTCCTTTTGAATGTTGTAATCAGATAAGGTTCTACCATCTTCTAATTGCTTACCA 105336
Query 45204 GCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTG 45263
||| | || |||| ||| || || || ||||| |||||||| ||||| || || |||
Sbjct 105337 GCGAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCTTTGTCTTGGATCTTAGACTTG 105396
Query 45264 ATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTT 45323
| || | |||||| ||||| || ||||| | |||| || || || |||| |||
Sbjct 105397 ACATTGTCAATGGTGTCCGAAGATTCAACTTCTAAGGTAATGGTCTTACCAGTTAAAGTC 105456
Query 45324 TTTACAAAAATTTGCAT 45340
|| || |||||||||||
Sbjct 105457 TTGACGAAAATTTGCAT 105473
>seq141
Length=295507
Score = 102 bits (112), Expect = 7e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 45144 GTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCT 45203
|| ||||||||||||||||| ||||| | ||| | ||| || ||||| || ||
Sbjct 196907 GTGGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGCCATCTTCTAATTGCTTACCG 196966
Query 45204 GCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTG 45263
|| | || |||| || ||||| || ||||| ||||| || |||||||| || |||
Sbjct 196967 GCAAAAATTAATCTCTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTG 197026
Query 45264 ATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGT 45322
| || | || | |||||| || ||||| ||||| | |||| || || || || | |||
Sbjct 197027 A-CGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAATGGTCTTACCTGTCAAAGT 197085
Query 45323 TTTTACAAAAATTTGCAT 45340
|| || |||||||||||
Sbjct 197086 CTTGACGAAAATTTGCAT 197103
Score = 102 bits (112), Expect = 7e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 45144 GTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCT 45203
|| ||||||||||||||||| ||||| | ||| | ||| || ||||| || ||
Sbjct 197135 GTGGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGCCATCTTCTAATTGCTTACCG 197194
Query 45204 GCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTG 45263
|| | || |||| || || || |||||||| ||||| || |||||||| || |||
Sbjct 197195 GCAAAAATTAATCTCTGTTGATCTGGCGGAATACCTTCCTTGTCTTGAATCTTGGACTTG 197254
Query 45264 ATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGT 45322
| || | || | |||||| || ||||| ||||| | |||| || || || || | |||
Sbjct 197255 A-CGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAATGGTCTTACCTGTCAAAGT 197313
Query 45323 TTTTACAAAAATTTGCAT 45340
|| || |||||||||||
Sbjct 197314 CTTGACGAAAATTTGCAT 197331
Score = 102 bits (112), Expect = 7e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 45144 GTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCT 45203
|| ||||||||||||||||| ||||| | ||| | ||| || ||||| || ||
Sbjct 197363 GTGGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGCCATCTTCTAATTGCTTACCG 197422
Query 45204 GCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTG 45263
|| | || |||| || || || |||||||| ||||| || |||||||| || |||
Sbjct 197423 GCAAAAATTAATCTCTGTTGATCTGGCGGAATACCTTCCTTGTCTTGAATCTTGGACTTG 197482
Query 45264 ATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGT 45322
| || | || | |||||| || ||||| ||||| | |||| || || || |||| ||
Sbjct 197483 A-CGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAATGGTCTTACCTGTTAATGT 197541
Query 45323 TTTTACAAAAATTTGCAT 45340
||| || || ||||||||
Sbjct 197542 TTTAACGAAGATTTGCAT 197559
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452002109542280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |