Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq101 107 2e-18 seq141 102 7e-17 >seq101 Length=125820 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 45144 GTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCT 45203 || ||||||||||| || || ||||| | |||| || ||| || ||||| || || Sbjct 105277 GTGGATTCCTTTTGAATGTTGTAATCAGATAAGGTTCTACCATCTTCTAATTGCTTACCA 105336 Query 45204 GCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTG 45263 ||| | || |||| ||| || || || ||||| |||||||| ||||| || || ||| Sbjct 105337 GCGAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCTTTGTCTTGGATCTTAGACTTG 105396 Query 45264 ATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTT 45323 | || | |||||| ||||| || ||||| | |||| || || || |||| ||| Sbjct 105397 ACATTGTCAATGGTGTCCGAAGATTCAACTTCTAAGGTAATGGTCTTACCAGTTAAAGTC 105456 Query 45324 TTTACAAAAATTTGCAT 45340 || || ||||||||||| Sbjct 105457 TTGACGAAAATTTGCAT 105473 >seq141 Length=295507 Score = 102 bits (112), Expect = 7e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 45144 GTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCT 45203 || ||||||||||||||||| ||||| | ||| | ||| || ||||| || || Sbjct 196907 GTGGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGCCATCTTCTAATTGCTTACCG 196966 Query 45204 GCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTG 45263 || | || |||| || ||||| || ||||| ||||| || |||||||| || ||| Sbjct 196967 GCAAAAATTAATCTCTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTG 197026 Query 45264 ATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGT 45322 | || | || | |||||| || ||||| ||||| | |||| || || || || | ||| Sbjct 197027 A-CGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAATGGTCTTACCTGTCAAAGT 197085 Query 45323 TTTTACAAAAATTTGCAT 45340 || || ||||||||||| Sbjct 197086 CTTGACGAAAATTTGCAT 197103 Score = 102 bits (112), Expect = 7e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 45144 GTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCT 45203 || ||||||||||||||||| ||||| | ||| | ||| || ||||| || || Sbjct 197135 GTGGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGCCATCTTCTAATTGCTTACCG 197194 Query 45204 GCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTG 45263 || | || |||| || || || |||||||| ||||| || |||||||| || ||| Sbjct 197195 GCAAAAATTAATCTCTGTTGATCTGGCGGAATACCTTCCTTGTCTTGAATCTTGGACTTG 197254 Query 45264 ATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGT 45322 | || | || | |||||| || ||||| ||||| | |||| || || || || | ||| Sbjct 197255 A-CGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAATGGTCTTACCTGTCAAAGT 197313 Query 45323 TTTTACAAAAATTTGCAT 45340 || || ||||||||||| Sbjct 197314 CTTGACGAAAATTTGCAT 197331 Score = 102 bits (112), Expect = 7e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 45144 GTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCT 45203 || ||||||||||||||||| ||||| | ||| | ||| || ||||| || || Sbjct 197363 GTGGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGCCATCTTCTAATTGCTTACCG 197422 Query 45204 GCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTG 45263 || | || |||| || || || |||||||| ||||| || |||||||| || ||| Sbjct 197423 GCAAAAATTAATCTCTGTTGATCTGGCGGAATACCTTCCTTGTCTTGAATCTTGGACTTG 197482 Query 45264 ATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGT 45322 | || | || | |||||| || ||||| ||||| | |||| || || || |||| || Sbjct 197483 A-CGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAATGGTCTTACCTGTTAATGT 197541 Query 45323 TTTTACAAAAATTTGCAT 45340 ||| || || |||||||| Sbjct 197542 TTTAACGAAGATTTGCAT 197559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002109542280