Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq103 205 1e-47 >seq103 Length=904190 Score = 205 bits (226), Expect = 1e-47 Identities = 1153/1815 (64%), Gaps = 57/1815 (3%) Strand=Plus/Plus Query 115564 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTG 115623 |||||||| |||||||| | |||| |||||| |||| | |||||| |||| |||||| Sbjct 447830 TAGTACATACCCGTCTTTAAACCCTTCTTCCAACCATAGAAATGCATCGAGGTCAACTTA 447889 Query 115624 GAGAGTGTTGGA--CTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTC 115681 | |||||| ||| |||| | || | ||| |||||||| ||||| Sbjct 447890 CCCATTGTTGGGTCCTTAATGTGAATA--TTTAACGATTGTGATTGATCAATGAATGCCG 447947 Query 115682 CCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGA----TTTCCCACACAGTTCTG 115737 | | ||| || |||||||| || | || ||| |||| ||||||| || || | Sbjct 447948 CTCTATCAGCAGCCATATCGATAATATGCTT----TTGAGAAATTTCCCAAACGGTCTTA 448003 Query 115738 TAGA-GGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTT 115796 || | || | | ||| ||||| || || | | |||| ||||| || || || Sbjct 448004 TATAAGGCTTTCAAT-TCATCGGGAATGTTAGGTAAGGTTTGAATAGAACCGT-TG--TT 448059 Query 115797 G---ACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCAC 115853 | | ||| | ||||||||| | ||||| ||| | | | | ||| | Sbjct 448060 GGAGATAATGTTGTTCTTCATATCATCGTTCCAGATACCTAAATCCACCAAATCACGTAA 448119 Query 115854 GAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATGTTGG 115912 | || ||||||| ||| ||||| || | | ||| ||| || || || | Sbjct 448120 TAAGTATGGGTTGACAATTTGAAATTCACCAGCCAAAACTCTTCT-AGAGTAAATATTTG 448178 Query 115913 TCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCA 115972 |||||||| || || || |||||||| || || ||||| | ||||| || || |||| Sbjct 448179 AAGTGTATGGTTCGAAACATTCATTGTTCCCTAAAATTTGAGAAGTGGAAGCAGTTGGCA 448238 Query 115973 TGGGTGCCA-TGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCG 116031 | || || | | | |||| ||| | || ||| | | || ||| | | Sbjct 448239 TCGGAGCAACTAATAAGGA-GTTTCTGATACCGTGTTTGGCCAAGTTTTGCTTCAAAGTA 448297 Query 116032 TCCCAGTCG--TAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTT 116089 |||||||| || || || ||| || | ||||||| ||||| || | || ||| | Sbjct 448298 TCCCAGTCCCATAATTCAG--TTGGCTTTCTTTCCCACAAGTCAAATTGTAAGACACCCT 448355 Query 116090 GGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGC 116149 || ||||| || || ||| |||| | || ||||| || | || |||||||| | Sbjct 448356 TAGATGCTGGAGAACCTTCATATGTTTGGTACGGGCCTTCGATTTCAGCCAATTCAATGG 448415 Query 116150 TCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCT 116209 || || | || |||| || || || |||||||| | | || | | | || || | Sbjct 448416 ATGCTTCCACAGCACCGTGGTAAATGGTTTCAAAAATTTGGGTGTTTAATTCTTTAGCTT 448475 Query 116210 CGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGA 116269 | | || ||||| | | | | ||||| |||| || | |||||| ||||| | Sbjct 448476 CTTGAGAGTCAAATGGTAATCTCAATGCCATAAAAGCATCGGCTAAACCTTGAACACCTA 448535 Query 116270 GGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA-CGGGATAAAAATTC 116328 | ||||||| | | |||||| || || || | ||| ||| | | || || | || Sbjct 448536 AGGCAATTGGTCTGTTTCTCATGTTCGAGTTCCTAGCT-TCTGGAACTGGGTAGTAGTTA 448594 Query 116329 CTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCG 116388 | ||||||| ||||||| || || |||||||| || | |||||| | ||||||| Sbjct 448595 CGGTCGATAATTCTATTTAAGTTACGCGTCACAACCTTAGTAACTTCATGTAACTTTTCG 448654 Query 116389 TAATCAAA---ACTGCGAG------TCTCTTCATTGACATACTTAGGAAGGGCGATTGAC 116439 |||| | |||| ||| |||||| | ||| | || | ||| || || Sbjct 448655 AAATCGTACCAACTG-GAGGTACTGTCTCTT--TCAACAAATGATGGTAAGGCAATAGAA 448711 Query 116440 GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAA 116499 |||| ||||| |||| ||||| ||| ||| || | ||| || |||||| Sbjct 448712 GCCAAGTTACAAACAGCAACTTCATCAGGCGCAGAGTATTCAACAATCTCACAACACAAG 448771 Query 116500 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 116559 || || || ||| | || |||||||||||||| | ||| ||||||| |||||||| Sbjct 448772 TTAGATGATTTGATGATACCTAAGTTCTTTTGATTGGTCTTCTTGTTACAAGCATCCTTA 448831 Query 116560 TAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACATCG 116619 || | |||| |||| || || || || ||||| | | | || || | ||||| | Sbjct 448832 TATAACATAAATGGAGTACCGGTTTCAGTTTGTGCATCCAAGATCGCGTACCATAATTTT 448891 Query 116620 GCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCA 116679 || | | | | | || || | ||||| || | ||| | | || Sbjct 448892 TGAGCCTTAATAACAGATCTACCACGGTTTTCTTTTTCGTATTTGGAGTATAATTCTTCG 448951 Query 116680 AACTCTTCACCCACAG-CCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCA 116738 || || ||| ||| || | ||||| | ||||| || | | |||| |||| | | ||| Sbjct 448952 AATTCATCA-CCATAGACATCTGATAAACCTGGAGCTTCGTTTGGAGAGAATAATGTCCA 449010 Query 116739 TTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAG 116798 | ||| | ||||| | ||||||||| | || || ||||| | |||| ||| | Sbjct 449011 GTCACCGTTTTGTTCAACTCTCTTCATGAATAAATCAGGAATCCATAAGGCCGGGAATAA 449070 Query 116799 ATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGAT 116858 ||| | | | | |||||| | || ||||| | | || | ||||| | || Sbjct 449071 ATCTCTAGCTCTATTTTCTTCTTTGCCGTGATTCTTTCTGATATCTATGAAGTCGAATAT 449130 Query 116859 ATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTGCGACGACCAGC 116912 |||||| ||||| ||||||| ||| | || | | || | |||| |||| | Sbjct 449131 ATCCGCATGCCAAGGTTCCAAGTAAAGAGCAAAGGCACCAGGTCTCTTG---TTACCACC 449187 Query 116913 CTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGA 116972 || | ||||| | || || |||||| || |||| ||||||||||||||||| ||| Sbjct 449188 TTGATCCACATAACGAGCGGTGTTGTTAAAAACACGAACCATTGGAATGATACCATTAGA 449247 Query 116973 TTGGCCATTTGTCCCCCGAATACGAG-ACTTGTTGGCTCTGACATCGTGGATGTGCATAC 117031 || || || || || || || | ||| | | | ||| ||||| | || Sbjct 449248 AGTACCGTTGGTACCGGCGATGTAAGTACCAG-TGGAACGAATGTTGTGAATGTGTAAAC 449306 Query 117032 CAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCAT 117091 |||| || ||||| | ||| || || || ||| | | | || ||||||| || | Sbjct 449307 CAATGCCACCTGCACTCTTGGAAATCAAAGCACACGTCTTCAAGGTGTCGTAGATACCGT 449366 Query 117092 CGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTAC 117151 | || |||||| |||| | || | | ||| || ||||||||||| || || |||| Sbjct 449367 CAATGGAGTCATCCTTCATAGCAACTAAGAAACAAGAAGACATTTGTGGGCTAGGGGTAC 449426 Query 117152 CAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGG 117211 |||| || || | |||||| | ||||| |||| | |||||||||| | | ||| | Sbjct 449427 CAGCATTAAATAAGGTTGGCGAACCGTGGGTGAAGTATCTTTGGGACATCATGTTGTACG 449486 Query 117212 TCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGT 117271 || | ||| || || || ||||| ||||| | | || | ||||| || | Sbjct 449487 ATTCGACGACTCTCTCGATATCGTCACCGTGTATACCAACAGCAACTCTCATAATCAAAT 449546 Query 117272 ATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAA-CTCTTCTCCAAGGTC 117330 ||| ||| |||| | |||| | || ||| | |||| |||| ||||| ||| Sbjct 449547 GTTGTGGTCTTTCGGCAACCTTACCGTTGATTCTCAACAAGTAAGATCTT-TCCAAAGTC 449605 Query 117331 TTGAGACCAAAATAG 117345 |||| || || ||| Sbjct 449606 TTGAATCCGAAGTAG 449620 Score = 82.4 bits (90), Expect = 9e-11 Identities = 105/145 (72%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| | ||| |||||||| | || | ||| || |||||| | ||| Sbjct 561665 GCAAAATCAGTGTGTAAACCTTCGTCACGACATATCAATTCGTTAGAGAAGGTTAAACCA 561724 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||| | ||| | |||||||||||||||||| | ||| || ||| ||||||||| Sbjct 561725 GGCATCAAACCTCTCTTCTTCAACCAGAAAATGGAGGCAAACGAACCACTGAAGAAGATA 561784 Query 127640 CCCTCCACACACGCGAACGCAAATA 127664 || || ||| ||||| |||| || Sbjct 561785 CCTTCGACAGCAGCGAAAGCAACTA 561809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613505719913880